EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000001485 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162396 (1 of many)
Alias: fb62c07|si:ch211-31o18.2|wu:fb62c07
Full Name: zgc:162396
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1579 bases
Position: chr2:18209112-18210690
Accession: ZDB-GENE-030131-1190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000000005	MTS	PF05175.14	6.5e-06	1	1
ENSTNIP00000000005	Methyltransf_31	PF13847.6	1.1e-13	1	1
ENSTNIP00000000005	Methyltransf_8	PF05148.15	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003218	-	819	-	ENSTNIP00000000005	272 (aa)	-	H3BVJ3

Gene Model

Click here to download ENSTNIG00000001485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000001485	zgc:162396	100	41.026	ENSTNIG00000000686	-	99	41.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001485	zgc:162396	100	61.765	ENSAPOG00000015421	zgc:162396	99	61.765	Acanthochromis_polyacanthus
ENSTNIG00000001485	zgc:162396	100	62.132	ENSACIG00000015427	zgc:162396	99	62.132	Amphilophus_citrinellus
ENSTNIG00000001485	zgc:162396	100	61.765	ENSAOCG00000004131	zgc:162396	99	61.765	Amphiprion_ocellaris
ENSTNIG00000001485	zgc:162396	100	62.500	ENSAPEG00000008189	zgc:162396	99	62.500	Amphiprion_percula
ENSTNIG00000001485	zgc:162396	100	60.294	ENSATEG00000011813	zgc:162396	98	60.294	Anabas_testudineus
ENSTNIG00000001485	zgc:162396	99	41.045	ENSAPLG00000012593	-	99	41.045	Anas_platyrhynchos
ENSTNIG00000001485	zgc:162396	100	59.559	ENSACLG00000006906	zgc:162396	99	59.559	Astatotilapia_calliptera
ENSTNIG00000001485	zgc:162396	100	57.721	ENSAMXG00000030552	zgc:162396	99	57.721	Astyanax_mexicanus
ENSTNIG00000001485	zgc:162396	94	48.627	ENSAMXG00000037578	zgc:162396	97	49.805	Astyanax_mexicanus
ENSTNIG00000001485	zgc:162396	95	48.485	ENSCPBG00000002804	-	99	43.911	Chrysemys_picta_bellii
ENSTNIG00000001485	zgc:162396	99	31.408	ENSCING00000012960	-	99	31.408	Ciona_intestinalis
ENSTNIG00000001485	zgc:162396	100	59.926	ENSCVAG00000021429	zgc:162396	99	59.926	Cyprinodon_variegatus
ENSTNIG00000001485	zgc:162396	100	54.779	ENSDARG00000069549	zgc:162396	98	75.510	Danio_rerio
ENSTNIG00000001485	zgc:162396	100	58.456	ENSELUG00000005372	zgc:162396	99	58.456	Esox_lucius
ENSTNIG00000001485	zgc:162396	99	42.066	ENSFALG00000012826	-	99	42.066	Ficedula_albicollis
ENSTNIG00000001485	zgc:162396	100	60.294	ENSFHEG00000005224	-	99	60.294	Fundulus_heteroclitus
ENSTNIG00000001485	zgc:162396	99	42.066	ENSGALG00000042073	-	99	42.066	Gallus_gallus
ENSTNIG00000001485	zgc:162396	99	42.066	ENSGALG00000050548	-	99	42.066	Gallus_gallus
ENSTNIG00000001485	zgc:162396	99	42.066	ENSGALG00000047535	-	99	42.066	Gallus_gallus
ENSTNIG00000001485	zgc:162396	100	61.029	ENSGAFG00000018387	-	99	61.029	Gambusia_affinis
ENSTNIG00000001485	zgc:162396	100	63.971	ENSGACG00000002200	zgc:162396	96	63.971	Gasterosteus_aculeatus
ENSTNIG00000001485	zgc:162396	100	59.191	ENSHBUG00000017584	zgc:162396	99	59.191	Haplochromis_burtoni
ENSTNIG00000001485	zgc:162396	100	54.044	ENSIPUG00000001159	zgc:162396	99	54.044	Ictalurus_punctatus
ENSTNIG00000001485	zgc:162396	100	56.618	ENSIPUG00000001171	-	99	56.618	Ictalurus_punctatus
ENSTNIG00000001485	zgc:162396	100	56.618	ENSIPUG00000001213	-	99	56.618	Ictalurus_punctatus
ENSTNIG00000001485	zgc:162396	100	60.294	ENSKMAG00000018426	-	99	60.294	Kryptolebias_marmoratus
ENSTNIG00000001485	zgc:162396	100	63.971	ENSLBEG00000026502	zgc:162396	99	63.971	Labrus_bergylta
ENSTNIG00000001485	zgc:162396	100	45.788	ENSLACG00000009261	-	99	45.788	Latimeria_chalumnae
ENSTNIG00000001485	zgc:162396	100	64.706	ENSMAMG00000013213	zgc:162396	99	64.706	Mastacembelus_armatus
ENSTNIG00000001485	zgc:162396	100	59.559	ENSMZEG00005000798	zgc:162396	99	59.559	Maylandia_zebra
ENSTNIG00000001485	zgc:162396	99	42.857	ENSMGAG00000003269	-	99	42.857	Meleagris_gallopavo
ENSTNIG00000001485	zgc:162396	100	60.294	ENSMMOG00000005445	zgc:162396	99	60.294	Mola_mola
ENSTNIG00000001485	zgc:162396	100	59.191	ENSNBRG00000014954	zgc:162396	99	59.191	Neolamprologus_brichardi
ENSTNIG00000001485	zgc:162396	100	59.191	ENSONIG00000004463	zgc:162396	99	59.191	Oreochromis_niloticus
ENSTNIG00000001485	zgc:162396	99	46.125	ENSOANG00000021828	-	96	46.125	Ornithorhynchus_anatinus
ENSTNIG00000001485	zgc:162396	65	40.341	ENSOANG00000015675	-	99	40.341	Ornithorhynchus_anatinus
ENSTNIG00000001485	zgc:162396	61	54.491	ENSORLG00000018107	zgc:162396	96	54.491	Oryzias_latipes
ENSTNIG00000001485	zgc:162396	100	57.353	ENSORLG00015008543	zgc:162396	99	57.353	Oryzias_latipes_hsok
ENSTNIG00000001485	zgc:162396	100	58.456	ENSOMEG00000010640	zgc:162396	99	58.456	Oryzias_melastigma
ENSTNIG00000001485	zgc:162396	99	57.565	ENSPKIG00000014798	zgc:162396	99	57.565	Paramormyrops_kingsleyae
ENSTNIG00000001485	zgc:162396	99	39.114	ENSPSIG00000016701	-	99	39.114	Pelodiscus_sinensis
ENSTNIG00000001485	zgc:162396	90	37.398	ENSPMAG00000003743	zgc:162396	100	37.398	Petromyzon_marinus
ENSTNIG00000001485	zgc:162396	76	34.762	ENSPMAG00000004744	zgc:162396	89	34.762	Petromyzon_marinus
ENSTNIG00000001485	zgc:162396	74	34.804	ENSPMAG00000006166	zgc:162396	100	34.804	Petromyzon_marinus
ENSTNIG00000001485	zgc:162396	100	60.294	ENSPFOG00000002666	zgc:162396	99	60.294	Poecilia_formosa
ENSTNIG00000001485	zgc:162396	100	60.662	ENSPLAG00000010281	zgc:162396	99	60.662	Poecilia_latipinna
ENSTNIG00000001485	zgc:162396	100	60.662	ENSPMEG00000002349	zgc:162396	99	60.662	Poecilia_mexicana
ENSTNIG00000001485	zgc:162396	100	60.294	ENSPREG00000016491	zgc:162396	99	60.294	Poecilia_reticulata
ENSTNIG00000001485	zgc:162396	100	59.191	ENSPNYG00000009858	zgc:162396	99	59.191	Pundamilia_nyererei
ENSTNIG00000001485	zgc:162396	100	58.456	ENSPNAG00000026074	zgc:162396	99	58.456	Pygocentrus_nattereri
ENSTNIG00000001485	zgc:162396	100	57.353	ENSPNAG00000004920	zgc:162396	100	57.353	Pygocentrus_nattereri
ENSTNIG00000001485	zgc:162396	99	33.101	ENSSHAG00000000950	-	99	33.101	Sarcophilus_harrisii
ENSTNIG00000001485	zgc:162396	100	56.618	ENSSFOG00015023495	zgc:162396	99	56.618	Scleropages_formosus
ENSTNIG00000001485	zgc:162396	100	59.559	ENSSFOG00015023503	zgc:162396	99	59.559	Scleropages_formosus
ENSTNIG00000001485	zgc:162396	100	65.441	ENSSMAG00000004484	zgc:162396	99	65.441	Scophthalmus_maximus
ENSTNIG00000001485	zgc:162396	100	65.074	ENSSDUG00000010278	zgc:162396	99	65.074	Seriola_dumerili
ENSTNIG00000001485	zgc:162396	100	64.338	ENSSLDG00000021423	zgc:162396	99	64.338	Seriola_lalandi_dorsalis
ENSTNIG00000001485	zgc:162396	99	43.750	ENSSPUG00000015532	-	84	43.750	Sphenodon_punctatus
ENSTNIG00000001485	zgc:162396	100	62.500	ENSSPAG00000005505	zgc:162396	99	62.500	Stegastes_partitus
ENSTNIG00000001485	zgc:162396	65	39.773	ENSTGUG00000015044	-	94	39.773	Taeniopygia_guttata
ENSTNIG00000001485	zgc:162396	99	41.544	ENSTGUG00000003861	-	100	41.544	Taeniopygia_guttata
ENSTNIG00000001485	zgc:162396	99	80.000	ENSTRUG00000007506	zgc:162396	99	80.000	Takifugu_rubripes
ENSTNIG00000001485	zgc:162396	100	55.882	ENSTRUG00000010648	-	99	55.882	Takifugu_rubripes
ENSTNIG00000001485	zgc:162396	100	38.971	ENSXETG00000033236	-	97	38.971	Xenopus_tropicalis
ENSTNIG00000001485	zgc:162396	100	60.662	ENSXCOG00000014529	zgc:162396	99	60.662	Xiphophorus_couchianus
ENSTNIG00000001485	zgc:162396	100	61.029	ENSXMAG00000023129	zgc:162396	99	61.029	Xiphophorus_maculatus