EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000001692 (Gene tree)
Gene ID: -
Gene Symbol: srsf6a
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine/arginine-rich splicing factor 6a
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3124 bases
Position: chr9:1040519-1043642
Accession: ZDB-GENE-040426-2824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002311	RRM_1	PF00076.22	1.9e-32	1	2
ENSTNIP00000002311	RRM_1	PF00076.22	1.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000002103	-	987	-	ENSTNIP00000002311	328 (aa)	-	H3C243

Gene Model

Click here to download ENSTNIG00000001692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001692's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000001692	srsf6a	52	41.714	ENSTNIG00000009993	-	75	43.077
ENSTNIG00000001692	srsf6a	52	41.714	ENSTNIG00000016223	srsf1a	65	42.286
ENSTNIG00000001692	srsf6a	55	64.444	ENSTNIG00000016411	srsf5b	64	64.444
ENSTNIG00000001692	srsf6a	55	39.378	ENSTNIG00000000697	srsf9	71	38.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001692	srsf6a	57	86.022	ENSG00000124193	SRSF6	87	71.096	Homo_sapiens
ENSTNIG00000001692	srsf6a	57	69.519	ENSAMEG00000003710	SRSF6	87	60.726	Ailuropoda_melanoleuca
ENSTNIG00000001692	srsf6a	76	76.400	ENSACIG00000020091	-	95	81.395	Amphilophus_citrinellus
ENSTNIG00000001692	srsf6a	96	76.101	ENSACIG00000023658	-	89	74.917	Amphilophus_citrinellus
ENSTNIG00000001692	srsf6a	56	85.946	ENSAOCG00000004309	-	97	71.154	Amphiprion_ocellaris
ENSTNIG00000001692	srsf6a	71	73.840	ENSAPEG00000020746	-	96	62.903	Amphiprion_percula
ENSTNIG00000001692	srsf6a	56	83.152	ENSATEG00000007255	-	93	65.000	Anabas_testudineus
ENSTNIG00000001692	srsf6a	56	86.486	ENSACAG00000002061	SRSF6	86	72.277	Anolis_carolinensis
ENSTNIG00000001692	srsf6a	56	87.097	ENSAMXG00000042692	-	96	84.444	Astyanax_mexicanus
ENSTNIG00000001692	srsf6a	57	86.022	ENSBTAG00000008527	SRSF6	87	70.627	Bos_taurus
ENSTNIG00000001692	srsf6a	57	86.022	ENSCJAG00000048403	SRSF6	99	73.606	Callithrix_jacchus
ENSTNIG00000001692	srsf6a	57	86.022	ENSCAFG00000009289	SRSF6	87	70.530	Canis_familiaris
ENSTNIG00000001692	srsf6a	57	86.022	ENSCAFG00020013559	SRSF6	87	70.530	Canis_lupus_dingo
ENSTNIG00000001692	srsf6a	57	86.022	ENSCHIG00000015890	-	87	70.627	Capra_hircus
ENSTNIG00000001692	srsf6a	57	84.946	ENSCHIG00000009148	-	87	69.967	Capra_hircus
ENSTNIG00000001692	srsf6a	57	63.978	ENSTSYG00000026476	SRSF6	85	54.785	Carlito_syrichta
ENSTNIG00000001692	srsf6a	57	80.645	ENSCPOG00000011761	SRSF6	58	93.590	Cavia_porcellus
ENSTNIG00000001692	srsf6a	57	86.022	ENSCCAG00000026018	-	89	70.358	Cebus_capucinus
ENSTNIG00000001692	srsf6a	57	75.661	ENSCCAG00000018540	-	94	56.270	Cebus_capucinus
ENSTNIG00000001692	srsf6a	57	86.022	ENSCATG00000030794	SRSF6	87	71.096	Cercocebus_atys
ENSTNIG00000001692	srsf6a	57	86.022	ENSCLAG00000010247	SRSF6	88	69.967	Chinchilla_lanigera
ENSTNIG00000001692	srsf6a	57	86.022	ENSCSAG00000014022	SRSF6	87	71.096	Chlorocebus_sabaeus
ENSTNIG00000001692	srsf6a	57	85.561	ENSCPBG00000018200	SRSF6	89	74.757	Chrysemys_picta_bellii
ENSTNIG00000001692	srsf6a	57	84.946	ENSCANG00000037774	-	87	70.432	Colobus_angolensis_palliatus
ENSTNIG00000001692	srsf6a	57	63.978	ENSCANG00000042529	-	85	55.150	Colobus_angolensis_palliatus
ENSTNIG00000001692	srsf6a	57	86.022	ENSCGRG00001022339	Srsf6	88	71.096	Cricetulus_griseus_chok1gshd
ENSTNIG00000001692	srsf6a	56	78.378	ENSDARG00000013729	srsf6a	91	62.717	Danio_rerio
ENSTNIG00000001692	srsf6a	56	88.235	ENSDARG00000016783	srsf6b	82	96.154	Danio_rerio
ENSTNIG00000001692	srsf6a	57	86.022	ENSDNOG00000008410	SRSF6	87	70.627	Dasypus_novemcinctus
ENSTNIG00000001692	srsf6a	57	86.022	ENSDORG00000028378	Srsf6	88	69.967	Dipodomys_ordii
ENSTNIG00000001692	srsf6a	57	82.258	ENSETEG00000006221	SRSF6	87	68.977	Echinops_telfairi
ENSTNIG00000001692	srsf6a	57	86.022	ENSEASG00005023429	SRSF6	87	70.297	Equus_asinus_asinus
ENSTNIG00000001692	srsf6a	57	86.022	ENSECAG00000023932	SRSF6	93	69.737	Equus_caballus
ENSTNIG00000001692	srsf6a	56	88.172	ENSELUG00000024182	SRSF6	90	87.805	Esox_lucius
ENSTNIG00000001692	srsf6a	95	68.421	ENSELUG00000013506	SRSF6	100	70.725	Esox_lucius
ENSTNIG00000001692	srsf6a	57	86.022	ENSFCAG00000032814	SRSF6	87	70.530	Felis_catus
ENSTNIG00000001692	srsf6a	57	63.978	ENSFDAG00000012191	SRSF6	86	54.125	Fukomys_damarensis
ENSTNIG00000001692	srsf6a	95	77.848	ENSFHEG00000023065	srsf6a	92	76.603	Fundulus_heteroclitus
ENSTNIG00000001692	srsf6a	55	74.033	ENSGMOG00000006105	srsf6a	62	71.823	Gadus_morhua
ENSTNIG00000001692	srsf6a	79	83.333	ENSGMOG00000014458	srsf6a	52	82.902	Gadus_morhua
ENSTNIG00000001692	srsf6a	56	85.561	ENSGALG00000000990	SRSF6	89	69.108	Gallus_gallus
ENSTNIG00000001692	srsf6a	94	67.335	ENSGACG00000006084	srsf6a	100	71.765	Gasterosteus_aculeatus
ENSTNIG00000001692	srsf6a	57	85.561	ENSGAGG00000003238	SRSF6	89	74.757	Gopherus_agassizii
ENSTNIG00000001692	srsf6a	57	86.022	ENSGGOG00000009808	SRSF6	87	71.096	Gorilla_gorilla
ENSTNIG00000001692	srsf6a	73	77.731	ENSHBUG00000006386	-	97	68.489	Haplochromis_burtoni
ENSTNIG00000001692	srsf6a	59	68.528	ENSHGLG00000007701	-	91	56.271	Heterocephalus_glaber_female
ENSTNIG00000001692	srsf6a	57	86.022	ENSHGLG00000007348	SRSF6	88	69.967	Heterocephalus_glaber_female
ENSTNIG00000001692	srsf6a	57	63.978	ENSHGLG00100005043	SRSF6	86	54.125	Heterocephalus_glaber_male
ENSTNIG00000001692	srsf6a	92	71.429	ENSHCOG00000002740	srsf6a	93	72.131	Hippocampus_comes
ENSTNIG00000001692	srsf6a	54	82.022	ENSIPUG00000016856	SRSF6	99	61.877	Ictalurus_punctatus
ENSTNIG00000001692	srsf6a	56	86.022	ENSIPUG00000004776	-	90	71.242	Ictalurus_punctatus
ENSTNIG00000001692	srsf6a	57	86.022	ENSSTOG00000010866	SRSF6	87	71.096	Ictidomys_tridecemlineatus
ENSTNIG00000001692	srsf6a	95	69.355	ENSKMAG00000011934	srsf6a	91	74.351	Kryptolebias_marmoratus
ENSTNIG00000001692	srsf6a	56	92.391	ENSLBEG00000007356	srsf6a	94	72.997	Labrus_bergylta
ENSTNIG00000001692	srsf6a	91	72.787	ENSLACG00000005466	SRSF6	88	72.185	Latimeria_chalumnae
ENSTNIG00000001692	srsf6a	56	76.630	ENSLACG00000009389	-	68	55.425	Latimeria_chalumnae
ENSTNIG00000001692	srsf6a	57	86.022	ENSMFAG00000036925	SRSF6	87	71.096	Macaca_fascicularis
ENSTNIG00000001692	srsf6a	57	86.022	ENSMMUG00000006742	SRSF6	87	71.096	Macaca_mulatta
ENSTNIG00000001692	srsf6a	57	85.484	ENSMNEG00000038270	-	87	70.432	Macaca_nemestrina
ENSTNIG00000001692	srsf6a	57	85.484	ENSMNEG00000027392	-	87	70.764	Macaca_nemestrina
ENSTNIG00000001692	srsf6a	88	94.595	ENSMAMG00000017161	srsf6a	100	77.937	Mastacembelus_armatus
ENSTNIG00000001692	srsf6a	84	71.168	ENSMZEG00005020658	-	95	67.647	Maylandia_zebra
ENSTNIG00000001692	srsf6a	73	80.252	ENSMZEG00005008032	-	97	72.115	Maylandia_zebra
ENSTNIG00000001692	srsf6a	57	85.484	ENSMICG00000008537	SRSF6	87	70.530	Microcebus_murinus
ENSTNIG00000001692	srsf6a	57	86.022	ENSMODG00000003107	SRSF6	88	71.429	Monodelphis_domestica
ENSTNIG00000001692	srsf6a	75	80.311	ENSMALG00000003702	srsf6a	60	79.679	Monopterus_albus
ENSTNIG00000001692	srsf6a	57	86.022	MGP_CAROLIEiJ_G0024606	Srsf6	88	71.096	Mus_caroli
ENSTNIG00000001692	srsf6a	57	86.022	ENSMUSG00000016921	Srsf6	88	71.096	Mus_musculus
ENSTNIG00000001692	srsf6a	57	86.022	MGP_PahariEiJ_G0026050	Srsf6	88	71.096	Mus_pahari
ENSTNIG00000001692	srsf6a	57	86.022	MGP_SPRETEiJ_G0025528	Srsf6	88	71.096	Mus_spretus
ENSTNIG00000001692	srsf6a	57	86.022	ENSMPUG00000017692	SRSF6	99	71.972	Mustela_putorius_furo
ENSTNIG00000001692	srsf6a	57	58.216	ENSMLUG00000016618	SRSF6	87	55.776	Myotis_lucifugus
ENSTNIG00000001692	srsf6a	57	86.022	ENSNGAG00000017560	Srsf6	90	70.861	Nannospalax_galili
ENSTNIG00000001692	srsf6a	56	84.865	ENSNBRG00000014709	-	97	68.810	Neolamprologus_brichardi
ENSTNIG00000001692	srsf6a	56	95.628	ENSNBRG00000001846	-	89	79.128	Neolamprologus_brichardi
ENSTNIG00000001692	srsf6a	57	86.022	ENSNLEG00000006524	SRSF6	87	71.096	Nomascus_leucogenys
ENSTNIG00000001692	srsf6a	57	86.022	ENSMEUG00000014615	SRSF6	98	71.572	Notamacropus_eugenii
ENSTNIG00000001692	srsf6a	56	84.865	ENSONIG00000020247	-	97	65.373	Oreochromis_niloticus
ENSTNIG00000001692	srsf6a	94	65.429	ENSONIG00000001925	-	87	79.743	Oreochromis_niloticus
ENSTNIG00000001692	srsf6a	57	66.667	ENSOCUG00000009785	-	100	59.868	Oryctolagus_cuniculus
ENSTNIG00000001692	srsf6a	55	52.747	ENSOCUG00000023999	-	70	53.039	Oryctolagus_cuniculus
ENSTNIG00000001692	srsf6a	57	77.540	ENSORLG00000003530	srsf6a	93	61.905	Oryzias_latipes
ENSTNIG00000001692	srsf6a	57	78.075	ENSORLG00015009410	srsf6a	93	62.798	Oryzias_latipes_hsok
ENSTNIG00000001692	srsf6a	57	85.484	ENSOGAG00000014468	SRSF6	87	70.861	Otolemur_garnettii
ENSTNIG00000001692	srsf6a	57	82.796	ENSOARG00000003117	SRSF6	87	68.647	Ovis_aries
ENSTNIG00000001692	srsf6a	57	72.581	ENSPPAG00000043131	-	97	63.123	Pan_paniscus
ENSTNIG00000001692	srsf6a	57	85.484	ENSPPAG00000034327	-	87	70.764	Pan_paniscus
ENSTNIG00000001692	srsf6a	57	86.022	ENSPPRG00000008917	SRSF6	87	70.530	Panthera_pardus
ENSTNIG00000001692	srsf6a	57	72.581	ENSPTRG00000046274	-	97	63.123	Pan_troglodytes
ENSTNIG00000001692	srsf6a	57	86.022	ENSPTRG00000044686	-	87	71.096	Pan_troglodytes
ENSTNIG00000001692	srsf6a	57	86.022	ENSPANG00000035224	SRSF6	87	71.096	Papio_anubis
ENSTNIG00000001692	srsf6a	94	74.107	ENSPKIG00000018463	-	77	94.872	Paramormyrops_kingsleyae
ENSTNIG00000001692	srsf6a	77	73.913	ENSPKIG00000015703	-	95	60.265	Paramormyrops_kingsleyae
ENSTNIG00000001692	srsf6a	95	80.000	ENSPMGG00000014963	srsf6a	91	80.065	Periophthalmus_magnuspinnatus
ENSTNIG00000001692	srsf6a	57	86.022	ENSPCIG00000003820	SRSF6	88	74.419	Phascolarctos_cinereus
ENSTNIG00000001692	srsf6a	56	90.476	ENSPFOG00000006437	srsf6a	68	66.761	Poecilia_formosa
ENSTNIG00000001692	srsf6a	95	72.973	ENSPLAG00000009243	srsf6a	79	89.683	Poecilia_latipinna
ENSTNIG00000001692	srsf6a	56	90.811	ENSPMEG00000006042	SRSF6	92	73.981	Poecilia_mexicana
ENSTNIG00000001692	srsf6a	57	86.022	ENSPPYG00000011019	SRSF6	87	71.096	Pongo_abelii
ENSTNIG00000001692	srsf6a	57	84.409	ENSPCAG00000010954	SRSF6	91	69.637	Procavia_capensis
ENSTNIG00000001692	srsf6a	57	85.484	ENSPCOG00000026364	SRSF6	87	70.199	Propithecus_coquereli
ENSTNIG00000001692	srsf6a	57	85.484	ENSPVAG00000015232	SRSF6	87	70.764	Pteropus_vampyrus
ENSTNIG00000001692	srsf6a	56	95.628	ENSPNYG00000011272	-	88	80.805	Pundamilia_nyererei
ENSTNIG00000001692	srsf6a	56	84.865	ENSPNYG00000004944	-	97	68.810	Pundamilia_nyererei
ENSTNIG00000001692	srsf6a	57	86.022	ENSRNOG00000006380	Srsf6	88	71.096	Rattus_norvegicus
ENSTNIG00000001692	srsf6a	57	84.409	ENSRBIG00000041414	SRSF6	87	70.100	Rhinopithecus_bieti
ENSTNIG00000001692	srsf6a	57	86.022	ENSRROG00000029989	SRSF6	87	70.764	Rhinopithecus_roxellana
ENSTNIG00000001692	srsf6a	57	86.022	ENSSBOG00000033708	-	87	71.096	Saimiri_boliviensis_boliviensis
ENSTNIG00000001692	srsf6a	56	71.739	ENSSBOG00000034078	-	89	53.165	Saimiri_boliviensis_boliviensis
ENSTNIG00000001692	srsf6a	57	86.022	ENSSHAG00000012805	SRSF6	88	71.429	Sarcophilus_harrisii
ENSTNIG00000001692	srsf6a	61	86.000	ENSSFOG00015015169	SRSF6	92	73.529	Scleropages_formosus
ENSTNIG00000001692	srsf6a	56	85.492	ENSSFOG00015019681	-	98	64.706	Scleropages_formosus
ENSTNIG00000001692	srsf6a	73	74.167	ENSSMAG00000017447	-	91	64.169	Scophthalmus_maximus
ENSTNIG00000001692	srsf6a	71	73.707	ENSSMAG00000014819	-	83	75.962	Scophthalmus_maximus
ENSTNIG00000001692	srsf6a	56	94.595	ENSSDUG00000016097	srsf6a	93	76.780	Seriola_dumerili
ENSTNIG00000001692	srsf6a	56	94.595	ENSSLDG00000022841	srsf6a	93	76.780	Seriola_lalandi_dorsalis
ENSTNIG00000001692	srsf6a	56	87.568	ENSSPUG00000004967	SRSF6	89	71.429	Sphenodon_punctatus
ENSTNIG00000001692	srsf6a	84	94.595	ENSSPAG00000002362	srsf6a	93	74.926	Stegastes_partitus
ENSTNIG00000001692	srsf6a	57	86.022	ENSSSCG00000007362	SRSF6	97	71.429	Sus_scrofa
ENSTNIG00000001692	srsf6a	56	85.405	ENSTGUG00000003455	SRSF6	89	69.872	Taeniopygia_guttata
ENSTNIG00000001692	srsf6a	57	86.022	ENSUAMG00000003559	SRSF6	87	70.530	Ursus_americanus
ENSTNIG00000001692	srsf6a	95	74.051	ENSXMAG00000021849	srsf6a	92	75.000	Xiphophorus_maculatus