EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000001921 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1783 bases
Position: chrUn_random:45812296-45814078
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000004306	zf-C2H2	PF00096.26	7.7e-24	1	4
ENSTNIP00000004306	zf-C2H2	PF00096.26	7.7e-24	2	4
ENSTNIP00000004306	zf-C2H2	PF00096.26	7.7e-24	3	4
ENSTNIP00000004306	zf-C2H2	PF00096.26	7.7e-24	4	4
ENSTNIP00000004306	zf-met	PF12874.7	0.00017	1	2
ENSTNIP00000004306	zf-met	PF12874.7	0.00017	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000004444	-	960	-	ENSTNIP00000004306	320 (aa)	-	Q4THJ1

Gene Model

Click here to download ENSTNIG00000001921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000001921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000001921	-	65	37.500	ENSTNIG00000002344	-	99	37.500
ENSTNIG00000001921	-	64	38.182	ENSTNIG00000000320	-	100	38.182
ENSTNIG00000001921	-	67	31.818	ENSTNIG00000001159	si:dkey-89b17.4	98	31.818
ENSTNIG00000001921	-	77	33.511	ENSTNIG00000003880	znf319b	87	36.885
ENSTNIG00000001921	-	64	36.025	ENSTNIG00000017000	-	100	36.025
ENSTNIG00000001921	-	99	36.364	ENSTNIG00000004148	-	70	32.609
ENSTNIG00000001921	-	68	33.166	ENSTNIG00000008154	-	99	33.166
ENSTNIG00000001921	-	65	38.889	ENSTNIG00000011367	znf710b	52	38.889
ENSTNIG00000001921	-	53	37.857	ENSTNIG00000000934	-	96	37.857
ENSTNIG00000001921	-	64	37.349	ENSTNIG00000000528	-	95	37.349
ENSTNIG00000001921	-	56	39.604	ENSTNIG00000008100	-	99	39.604
ENSTNIG00000001921	-	52	39.623	ENSTNIG00000003479	-	98	39.623
ENSTNIG00000001921	-	63	35.928	ENSTNIG00000008200	-	99	35.928
ENSTNIG00000001921	-	52	31.690	ENSTNIG00000008504	snai2	54	31.690
ENSTNIG00000001921	-	65	34.395	ENSTNIG00000000277	-	93	34.395
ENSTNIG00000001921	-	95	36.364	ENSTNIG00000008583	PRDM15	70	36.364
ENSTNIG00000001921	-	53	39.645	ENSTNIG00000000330	-	100	39.645
ENSTNIG00000001921	-	98	32.759	ENSTNIG00000005901	prdm5	81	32.759
ENSTNIG00000001921	-	62	31.579	ENSTNIG00000000073	znf646	97	31.579
ENSTNIG00000001921	-	60	39.645	ENSTNIG00000002343	-	85	39.645
ENSTNIG00000001921	-	65	32.418	ENSTNIG00000005798	zbtb16a	54	33.908
ENSTNIG00000001921	-	99	35.802	ENSTNIG00000009020	prdm12b	58	32.468
ENSTNIG00000001921	-	82	37.778	ENSTNIG00000005023	-	99	37.778
ENSTNIG00000001921	-	56	37.374	ENSTNIG00000009831	-	94	37.374
ENSTNIG00000001921	-	99	34.884	ENSTNIG00000005859	-	59	34.884
ENSTNIG00000001921	-	65	38.732	ENSTNIG00000005856	-	99	38.732
ENSTNIG00000001921	-	65	36.719	ENSTNIG00000012473	scrt2	53	36.719
ENSTNIG00000001921	-	65	36.207	ENSTNIG00000001164	ZNF628	98	36.207
ENSTNIG00000001921	-	60	34.815	ENSTNIG00000005479	-	99	34.815
ENSTNIG00000001921	-	65	43.750	ENSTNIG00000018001	e4f1	53	35.135
ENSTNIG00000001921	-	63	40.000	ENSTNIG00000018984	-	97	40.000
ENSTNIG00000001921	-	65	39.286	ENSTNIG00000003979	-	99	39.286
ENSTNIG00000001921	-	91	35.780	ENSTNIG00000014443	prdm9	75	35.780
ENSTNIG00000001921	-	61	46.000	ENSTNIG00000005051	znf341	57	46.000
ENSTNIG00000001921	-	53	35.238	ENSTNIG00000013806	wt1b	57	32.632
ENSTNIG00000001921	-	53	39.344	ENSTNIG00000003834	gfi1b	52	39.344
ENSTNIG00000001921	-	53	35.088	ENSTNIG00000012449	zbtb48	50	35.260
ENSTNIG00000001921	-	58	38.947	ENSTNIG00000010722	GZF1	50	38.947
ENSTNIG00000001921	-	58	39.450	ENSTNIG00000011188	-	98	39.450
ENSTNIG00000001921	-	64	36.095	ENSTNIG00000008242	-	99	36.538
ENSTNIG00000001921	-	64	37.624	ENSTNIG00000019069	-	100	37.624
ENSTNIG00000001921	-	63	31.507	ENSTNIG00000003865	-	55	31.507
ENSTNIG00000001921	-	69	35.821	ENSTNIG00000018384	scrt1b	52	35.821
ENSTNIG00000001921	-	91	30.449	ENSTNIG00000008194	prdm14	78	30.449

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000001921	-	68	63.556	ENSTGUG00000015149	-	82	64.000	Taeniopygia_guttata