EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000002003 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 873 bases
Position: chrUn_random:46795332-46796204
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000004411	MMR_HSR1	PF01926.23	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000004550	-	612	-	ENSTNIP00000004411	203 (aa)	-	Q4TGT4

Gene Model

Click here to download ENSTNIG00000002003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002003's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000002003	-	73	52.027	ENSTNIG00000004511	-	92	52.027
ENSTNIG00000002003	-	76	38.750	ENSTNIG00000011114	-	77	38.750
ENSTNIG00000002003	-	78	45.625	ENSTNIG00000008717	rab18a	77	45.625
ENSTNIG00000002003	-	78	40.000	ENSTNIG00000012343	-	69	40.000
ENSTNIG00000002003	-	75	31.579	ENSTNIG00000013137	ran	69	31.579
ENSTNIG00000002003	-	75	34.839	ENSTNIG00000012154	kras	86	35.758
ENSTNIG00000002003	-	81	52.727	ENSTNIG00000003472	rab2a	77	52.727
ENSTNIG00000002003	-	78	41.509	ENSTNIG00000016414	rab15	75	41.509
ENSTNIG00000002003	-	83	45.349	ENSTNIG00000003679	-	80	45.349
ENSTNIG00000002003	-	73	36.000	ENSTNIG00000011385	hrasb	84	36.875
ENSTNIG00000002003	-	79	73.125	ENSTNIG00000004004	-	87	73.125
ENSTNIG00000002003	-	79	52.500	ENSTNIG00000009039	rab14	73	52.500
ENSTNIG00000002003	-	76	34.194	ENSTNIG00000015257	rab6bb	75	34.194
ENSTNIG00000002003	-	82	42.515	ENSTNIG00000011300	si:dkey-16l2.16	95	39.901
ENSTNIG00000002003	-	57	30.252	ENSTNIG00000003426	-	58	30.252
ENSTNIG00000002003	-	66	33.582	ENSTNIG00000013920	rab20	55	33.582
ENSTNIG00000002003	-	100	57.895	ENSTNIG00000005090	rab25a	93	57.895
ENSTNIG00000002003	-	78	41.250	ENSTNIG00000014859	rab12	66	41.250
ENSTNIG00000002003	-	100	96.552	ENSTNIG00000011081	rab11bb	93	96.552
ENSTNIG00000002003	-	78	47.170	ENSTNIG00000011711	rab5c	72	47.170
ENSTNIG00000002003	-	82	34.731	ENSTNIG00000017951	rabl2	72	34.731
ENSTNIG00000002003	-	99	42.079	ENSTNIG00000009196	rab5aa	88	42.079
ENSTNIG00000002003	-	79	46.914	ENSTNIG00000007882	rab18b	78	46.914
ENSTNIG00000002003	-	76	34.810	ENSTNIG00000016831	RAB41	74	34.810
ENSTNIG00000002003	-	61	34.127	ENSTNIG00000006917	si:cabz01085950.1	94	34.127
ENSTNIG00000002003	-	80	32.317	ENSTNIG00000007566	si:ch73-116o1.2	81	33.908
ENSTNIG00000002003	-	83	40.588	ENSTNIG00000015000	zgc:101559	72	40.588
ENSTNIG00000002003	-	83	35.556	ENSTNIG00000010125	rab33ba	75	35.556
ENSTNIG00000002003	-	87	34.463	ENSTNIG00000010122	rab33a	77	34.463
ENSTNIG00000002003	-	78	41.509	ENSTNIG00000018267	rab22a	82	41.509
ENSTNIG00000002003	-	76	38.065	ENSTNIG00000008784	-	96	38.065
ENSTNIG00000002003	-	78	43.750	ENSTNIG00000006650	RAB19	74	43.750
ENSTNIG00000002003	-	79	36.585	ENSTNIG00000001195	rab9a	81	36.585
ENSTNIG00000002003	-	82	45.181	ENSTNIG00000018319	-	83	45.181
ENSTNIG00000002003	-	78	32.075	ENSTNIG00000014591	rheb	86	32.075
ENSTNIG00000002003	-	76	40.385	ENSTNIG00000001260	RAB15	73	40.385
ENSTNIG00000002003	-	76	39.744	ENSTNIG00000017844	-	83	39.744
ENSTNIG00000002003	-	75	33.962	ENSTNIG00000016231	rab34a	60	33.962
ENSTNIG00000002003	-	100	97.537	ENSTNIG00000013184	-	93	97.537
ENSTNIG00000002003	-	100	96.552	ENSTNIG00000013182	-	94	96.552
ENSTNIG00000002003	-	82	31.737	ENSTNIG00000016575	rab23	75	32.768
ENSTNIG00000002003	-	89	40.659	ENSTNIG00000018498	-	78	40.659
ENSTNIG00000002003	-	78	31.875	ENSTNIG00000001043	si:ch211-247i17.1	79	31.875
ENSTNIG00000002003	-	86	36.517	ENSTNIG00000001956	RAB9A	83	36.517
ENSTNIG00000002003	-	76	38.750	ENSTNIG00000014604	RAB7A	77	38.750
ENSTNIG00000002003	-	78	35.849	ENSTNIG00000001448	-	95	35.849

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002003	-	100	96.552	ENSAPOG00000023455	rab11bb	93	96.552	Acanthochromis_polyacanthus
ENSTNIG00000002003	-	100	97.044	ENSACIG00000024376	-	93	97.044	Amphilophus_citrinellus
ENSTNIG00000002003	-	100	84.236	ENSACIG00000019631	rab11bb	92	84.236	Amphilophus_citrinellus
ENSTNIG00000002003	-	100	97.044	ENSAOCG00000018849	-	93	97.044	Amphiprion_ocellaris
ENSTNIG00000002003	-	100	96.552	ENSAOCG00000018239	rab11bb	93	96.552	Amphiprion_ocellaris
ENSTNIG00000002003	-	100	96.552	ENSAPEG00000016590	rab11bb	93	96.552	Amphiprion_percula
ENSTNIG00000002003	-	100	97.537	ENSATEG00000023725	-	93	97.537	Anabas_testudineus
ENSTNIG00000002003	-	100	96.552	ENSATEG00000017696	rab11bb	93	96.552	Anabas_testudineus
ENSTNIG00000002003	-	100	96.059	ENSAPLG00000011046	-	93	96.059	Anas_platyrhynchos
ENSTNIG00000002003	-	100	96.552	ENSACLG00000007076	rab11bb	93	96.552	Astatotilapia_calliptera
ENSTNIG00000002003	-	100	97.044	ENSACLG00000005446	-	93	97.044	Astatotilapia_calliptera
ENSTNIG00000002003	-	100	96.552	ENSAMXG00000042655	rab11bb	93	96.552	Astyanax_mexicanus
ENSTNIG00000002003	-	100	95.567	ENSAMXG00000037623	-	93	95.567	Astyanax_mexicanus
ENSTNIG00000002003	-	100	95.074	ENSBTAG00000002475	RAB11B	93	95.074	Bos_taurus
ENSTNIG00000002003	-	100	94.581	ENSCHIG00000022426	-	91	94.581	Capra_hircus
ENSTNIG00000002003	-	100	95.074	ENSCATG00000029188	-	93	95.074	Cercocebus_atys
ENSTNIG00000002003	-	100	96.059	ENSCPBG00000017056	-	93	96.059	Chrysemys_picta_bellii
ENSTNIG00000002003	-	100	96.552	ENSCSEG00000012149	rab11bb	93	96.552	Cynoglossus_semilaevis
ENSTNIG00000002003	-	100	97.537	ENSCSEG00000007239	-	93	97.537	Cynoglossus_semilaevis
ENSTNIG00000002003	-	100	96.552	ENSCVAG00000017021	-	93	96.552	Cyprinodon_variegatus
ENSTNIG00000002003	-	100	96.059	ENSCVAG00000019718	-	93	96.059	Cyprinodon_variegatus
ENSTNIG00000002003	-	100	95.567	ENSCVAG00000019751	-	93	95.567	Cyprinodon_variegatus
ENSTNIG00000002003	-	100	95.567	ENSDARG00000090086	rab11bb	93	95.567	Danio_rerio
ENSTNIG00000002003	-	100	95.074	ENSETEG00000000905	-	94	95.074	Echinops_telfairi
ENSTNIG00000002003	-	100	94.581	ENSEASG00005003708	-	94	94.581	Equus_asinus_asinus
ENSTNIG00000002003	-	100	94.581	ENSECAG00000000716	RAB11B	94	94.581	Equus_caballus
ENSTNIG00000002003	-	100	95.567	ENSELUG00000021148	rab11bb	93	95.567	Esox_lucius
ENSTNIG00000002003	-	100	96.059	ENSELUG00000000916	-	93	96.059	Esox_lucius
ENSTNIG00000002003	-	100	96.552	ENSELUG00000020948	-	93	96.552	Esox_lucius
ENSTNIG00000002003	-	100	96.059	ENSFALG00000011828	-	93	96.059	Ficedula_albicollis
ENSTNIG00000002003	-	100	96.552	ENSFHEG00000018353	rab11bb	93	96.552	Fundulus_heteroclitus
ENSTNIG00000002003	-	100	97.537	ENSFHEG00000022676	-	93	97.537	Fundulus_heteroclitus
ENSTNIG00000002003	-	100	94.089	ENSGMOG00000009668	-	93	94.089	Gadus_morhua
ENSTNIG00000002003	-	100	96.552	ENSGMOG00000009211	rab11bb	93	96.552	Gadus_morhua
ENSTNIG00000002003	-	100	96.059	ENSGALG00000000613	RAB11B	93	96.059	Gallus_gallus
ENSTNIG00000002003	-	100	96.552	ENSGAFG00000007102	rab11bb	93	96.552	Gambusia_affinis
ENSTNIG00000002003	-	100	96.059	ENSGACG00000013297	-	92	96.059	Gasterosteus_aculeatus
ENSTNIG00000002003	-	100	96.059	ENSGACG00000015479	rab11bb	93	96.059	Gasterosteus_aculeatus
ENSTNIG00000002003	-	100	95.074	ENSGGOG00000014516	RAB11B	93	95.074	Gorilla_gorilla
ENSTNIG00000002003	-	100	97.044	ENSHBUG00000009947	-	93	97.044	Haplochromis_burtoni
ENSTNIG00000002003	-	100	96.552	ENSHBUG00000014777	rab11bb	93	96.552	Haplochromis_burtoni
ENSTNIG00000002003	-	100	96.059	ENSHCOG00000002423	rab11bb	93	96.059	Hippocampus_comes
ENSTNIG00000002003	-	100	91.626	ENSHCOG00000000985	-	93	91.626	Hippocampus_comes
ENSTNIG00000002003	-	100	95.567	ENSHCOG00000000954	-	96	95.545	Hippocampus_comes
ENSTNIG00000002003	-	100	96.552	ENSIPUG00000019927	rab11bb	93	96.552	Ictalurus_punctatus
ENSTNIG00000002003	-	100	95.567	ENSIPUG00000025100	rab11b	93	95.567	Ictalurus_punctatus
ENSTNIG00000002003	-	100	97.044	ENSKMAG00000006170	-	93	97.044	Kryptolebias_marmoratus
ENSTNIG00000002003	-	100	96.552	ENSKMAG00000009033	rab11bb	93	96.552	Kryptolebias_marmoratus
ENSTNIG00000002003	-	100	96.552	ENSLBEG00000015248	rab11bb	93	96.552	Labrus_bergylta
ENSTNIG00000002003	-	100	96.059	ENSLBEG00000004172	-	93	96.059	Labrus_bergylta
ENSTNIG00000002003	-	100	88.177	ENSLBEG00000005981	-	93	88.177	Labrus_bergylta
ENSTNIG00000002003	-	100	96.059	ENSLACG00000016857	-	93	96.059	Latimeria_chalumnae
ENSTNIG00000002003	-	100	95.074	ENSMFAG00000003654	RAB11B	93	95.074	Macaca_fascicularis
ENSTNIG00000002003	-	100	95.074	ENSMLEG00000030601	-	93	95.074	Mandrillus_leucophaeus
ENSTNIG00000002003	-	100	96.059	ENSMAMG00000006378	rab11bb	93	96.059	Mastacembelus_armatus
ENSTNIG00000002003	-	100	96.059	ENSMAMG00000018533	-	93	96.059	Mastacembelus_armatus
ENSTNIG00000002003	-	100	97.044	ENSMZEG00005010975	-	93	97.044	Maylandia_zebra
ENSTNIG00000002003	-	100	96.552	ENSMZEG00005003352	rab11bb	93	96.552	Maylandia_zebra
ENSTNIG00000002003	-	100	95.074	ENSMICG00000034065	-	93	95.074	Microcebus_murinus
ENSTNIG00000002003	-	100	97.044	ENSMMOG00000001250	-	93	97.044	Mola_mola
ENSTNIG00000002003	-	100	97.537	ENSMMOG00000001238	-	93	97.537	Mola_mola
ENSTNIG00000002003	-	100	96.552	ENSMMOG00000007917	rab11bb	99	96.552	Mola_mola
ENSTNIG00000002003	-	100	96.059	ENSMODG00000003841	-	93	96.059	Monodelphis_domestica
ENSTNIG00000002003	-	100	96.552	ENSMALG00000022187	rab11bb	93	96.552	Monopterus_albus
ENSTNIG00000002003	-	100	86.341	ENSMLUG00000006677	-	99	86.341	Myotis_lucifugus
ENSTNIG00000002003	-	100	96.552	ENSNBRG00000000372	rab11bb	93	96.552	Neolamprologus_brichardi
ENSTNIG00000002003	-	100	97.044	ENSNBRG00000023885	-	93	97.044	Neolamprologus_brichardi
ENSTNIG00000002003	-	100	96.059	ENSMEUG00000003686	-	93	96.059	Notamacropus_eugenii
ENSTNIG00000002003	-	100	97.044	ENSONIG00000002544	-	93	97.044	Oreochromis_niloticus
ENSTNIG00000002003	-	100	96.552	ENSONIG00000010435	rab11bb	93	96.552	Oreochromis_niloticus
ENSTNIG00000002003	-	53	100.000	ENSOANG00000031567	-	77	100.000	Ornithorhynchus_anatinus
ENSTNIG00000002003	-	100	95.074	ENSORLG00000015284	-	67	95.074	Oryzias_latipes
ENSTNIG00000002003	-	100	96.059	ENSORLG00000013938	rab11bb	93	96.059	Oryzias_latipes
ENSTNIG00000002003	-	100	96.059	ENSORLG00020019393	rab11bb	94	96.059	Oryzias_latipes_hni
ENSTNIG00000002003	-	100	95.074	ENSORLG00020020844	RAB11B	93	95.074	Oryzias_latipes_hni
ENSTNIG00000002003	-	100	96.059	ENSORLG00015020173	rab11bb	93	96.059	Oryzias_latipes_hsok
ENSTNIG00000002003	-	100	95.074	ENSORLG00015016999	RAB11B	93	95.074	Oryzias_latipes_hsok
ENSTNIG00000002003	-	100	96.552	ENSOMEG00000017806	-	93	96.552	Oryzias_melastigma
ENSTNIG00000002003	-	100	96.059	ENSOMEG00000002562	-	93	96.059	Oryzias_melastigma
ENSTNIG00000002003	-	100	95.074	ENSPPAG00000028589	-	93	95.074	Pan_paniscus
ENSTNIG00000002003	-	100	95.074	ENSPTRG00000010422	RAB11B	93	95.074	Pan_troglodytes
ENSTNIG00000002003	-	100	95.074	ENSPANG00000007765	-	93	95.074	Papio_anubis
ENSTNIG00000002003	-	99	96.020	ENSPKIG00000001389	-	65	96.020	Paramormyrops_kingsleyae
ENSTNIG00000002003	-	99	97.030	ENSPKIG00000011640	rab11bb	93	97.030	Paramormyrops_kingsleyae
ENSTNIG00000002003	-	100	97.044	ENSPKIG00000011703	-	93	97.044	Paramormyrops_kingsleyae
ENSTNIG00000002003	-	100	93.301	ENSPSIG00000010242	-	81	93.301	Pelodiscus_sinensis
ENSTNIG00000002003	-	100	96.552	ENSPMGG00000009435	rab11bb	93	96.552	Periophthalmus_magnuspinnatus
ENSTNIG00000002003	-	100	95.567	ENSPMGG00000014333	-	93	95.567	Periophthalmus_magnuspinnatus
ENSTNIG00000002003	-	100	94.089	ENSPMGG00000014336	-	93	94.089	Periophthalmus_magnuspinnatus
ENSTNIG00000002003	-	100	96.059	ENSPCIG00000020371	-	94	96.059	Phascolarctos_cinereus
ENSTNIG00000002003	-	100	97.044	ENSPFOG00000006224	-	93	97.044	Poecilia_formosa
ENSTNIG00000002003	-	100	96.552	ENSPFOG00000024114	-	93	96.552	Poecilia_formosa
ENSTNIG00000002003	-	100	96.552	ENSPLAG00000001598	rab11bb	93	96.552	Poecilia_latipinna
ENSTNIG00000002003	-	100	97.044	ENSPLAG00000014207	-	93	97.044	Poecilia_latipinna
ENSTNIG00000002003	-	100	96.552	ENSPMEG00000012389	rab11bb	93	96.552	Poecilia_mexicana
ENSTNIG00000002003	-	100	97.044	ENSPMEG00000007842	-	93	97.044	Poecilia_mexicana
ENSTNIG00000002003	-	100	96.552	ENSPREG00000006336	-	93	96.552	Poecilia_reticulata
ENSTNIG00000002003	-	100	96.552	ENSPREG00000014269	rab11bb	93	96.552	Poecilia_reticulata
ENSTNIG00000002003	-	100	96.552	ENSPNYG00000004098	rab11bb	93	96.552	Pundamilia_nyererei
ENSTNIG00000002003	-	100	97.044	ENSPNYG00000019611	-	93	97.044	Pundamilia_nyererei
ENSTNIG00000002003	-	100	95.074	ENSRROG00000037812	-	93	95.074	Rhinopithecus_roxellana
ENSTNIG00000002003	-	100	96.059	ENSSHAG00000006816	-	93	96.059	Sarcophilus_harrisii
ENSTNIG00000002003	-	100	70.936	ENSSFOG00015006245	-	93	70.936	Scleropages_formosus
ENSTNIG00000002003	-	100	96.552	ENSSFOG00015009042	rab11bb	93	96.552	Scleropages_formosus
ENSTNIG00000002003	-	100	96.059	ENSSMAG00000004922	rab11bb	93	96.059	Scophthalmus_maximus
ENSTNIG00000002003	-	100	95.074	ENSSMAG00000018613	-	93	95.074	Scophthalmus_maximus
ENSTNIG00000002003	-	100	96.552	ENSSDUG00000013558	rab11bb	93	96.552	Seriola_dumerili
ENSTNIG00000002003	-	100	97.044	ENSSDUG00000002934	-	93	97.044	Seriola_dumerili
ENSTNIG00000002003	-	100	96.552	ENSSLDG00000020676	rab11bb	93	96.552	Seriola_lalandi_dorsalis
ENSTNIG00000002003	-	100	97.044	ENSSLDG00000005275	-	93	97.044	Seriola_lalandi_dorsalis
ENSTNIG00000002003	-	100	96.059	ENSSPUG00000002243	-	93	96.059	Sphenodon_punctatus
ENSTNIG00000002003	-	100	96.552	ENSSPAG00000011419	rab11bb	93	96.552	Stegastes_partitus
ENSTNIG00000002003	-	100	97.044	ENSSPAG00000014559	-	93	97.044	Stegastes_partitus
ENSTNIG00000002003	-	100	96.059	ENSTGUG00000000084	-	93	96.059	Taeniopygia_guttata
ENSTNIG00000002003	-	100	96.552	ENSTRUG00000022029	rab11bb	93	96.552	Takifugu_rubripes
ENSTNIG00000002003	-	100	96.552	ENSTRUG00000021619	-	94	96.552	Takifugu_rubripes
ENSTNIG00000002003	-	100	98.030	ENSTRUG00000021614	-	93	98.030	Takifugu_rubripes
ENSTNIG00000002003	-	100	95.074	ENSUAMG00000006639	-	99	95.074	Ursus_americanus
ENSTNIG00000002003	-	100	96.059	ENSXETG00000025484	rab11b.1	92	96.059	Xenopus_tropicalis
ENSTNIG00000002003	-	100	96.552	ENSXCOG00000008042	-	93	96.552	Xiphophorus_couchianus
ENSTNIG00000002003	-	100	97.044	ENSXCOG00000009190	-	93	97.044	Xiphophorus_couchianus
ENSTNIG00000002003	-	100	96.552	ENSXMAG00000011926	rab11bb	93	96.552	Xiphophorus_maculatus
ENSTNIG00000002003	-	100	96.552	ENSXMAG00000024840	-	93	96.552	Xiphophorus_maculatus