EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000002060 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1362 bases
Position: chrUn_random:47190455-47191816
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000004489	RRM_5	PF13893.6	3.1e-10	1	1
ENSTNIP00000004489	RRM_1	PF00076.22	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000004630	-	678	-	ENSTNIP00000004489	226 (aa)	-	H3C8B7

Gene Model

Click here to download ENSTNIG00000002060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002060	-	100	69.787	ENSG00000011304	PTBP1	92	66.667	Homo_sapiens
ENSTNIG00000002060	-	60	36.496	ENSG00000104824	HNRNPL	60	40.741	Homo_sapiens
ENSTNIG00000002060	-	99	66.379	ENSANAG00000021256	-	50	65.948	Aotus_nancymaae
ENSTNIG00000002060	-	89	74.384	ENSBTAG00000045828	PTBP1	51	72.532	Bos_taurus
ENSTNIG00000002060	-	100	56.897	ENSCHIG00000024922	PTBP2	63	56.466	Capra_hircus
ENSTNIG00000002060	-	100	56.466	ENSTSYG00000002576	PTBP2	54	54.310	Carlito_syrichta
ENSTNIG00000002060	-	89	74.877	ENSCCAG00000025811	-	51	77.070	Cebus_capucinus
ENSTNIG00000002060	-	100	56.897	ENSCCAG00000026345	PTBP2	57	56.466	Cebus_capucinus
ENSTNIG00000002060	-	100	59.565	ENSCCAG00000036365	-	54	62.281	Cebus_capucinus
ENSTNIG00000002060	-	100	56.897	ENSCATG00000039005	PTBP2	54	53.909	Cercocebus_atys
ENSTNIG00000002060	-	50	42.241	ENSCING00000001244	-	59	45.745	Ciona_intestinalis
ENSTNIG00000002060	-	66	74.522	ENSCANG00000042399	-	51	75.796	Colobus_angolensis_palliatus
ENSTNIG00000002060	-	64	74.172	ENSCGRG00001013595	-	50	74.497	Cricetulus_griseus_chok1gshd
ENSTNIG00000002060	-	100	57.265	ENSCGRG00001002036	-	55	58.798	Cricetulus_griseus_chok1gshd
ENSTNIG00000002060	-	100	56.897	ENSDNOG00000017687	PTBP2	58	55.794	Dasypus_novemcinctus
ENSTNIG00000002060	-	89	66.337	ENSEASG00005021525	-	57	63.519	Equus_asinus_asinus
ENSTNIG00000002060	-	100	56.897	ENSECAG00000015783	PTBP2	58	55.794	Equus_caballus
ENSTNIG00000002060	-	100	56.897	ENSFCAG00000027655	PTBP2	57	56.466	Felis_catus
ENSTNIG00000002060	-	100	57.328	ENSGGOG00000000659	PTBP2	54	56.466	Gorilla_gorilla
ENSTNIG00000002060	-	60	35.036	ENSLAFG00000025536	HNRNPL	54	35.036	Loxodonta_africana
ENSTNIG00000002060	-	89	74.384	ENSMNEG00000028851	PTBP1	51	78.523	Macaca_nemestrina
ENSTNIG00000002060	-	59	37.037	ENSMNEG00000039542	-	60	41.284	Macaca_nemestrina
ENSTNIG00000002060	-	100	56.897	ENSMLEG00000031749	PTBP2	54	53.909	Mandrillus_leucophaeus
ENSTNIG00000002060	-	100	57.447	ENSMGAG00000007308	PTBP2	88	59.259	Meleagris_gallopavo
ENSTNIG00000002060	-	88	66.834	ENSMICG00000009789	-	54	60.435	Microcebus_murinus
ENSTNIG00000002060	-	100	56.410	ENSMICG00000008543	PTBP2	54	55.603	Microcebus_murinus
ENSTNIG00000002060	-	100	69.787	ENSMICG00000007131	PTBP1	54	71.839	Microcebus_murinus
ENSTNIG00000002060	-	89	66.337	ENSMOCG00000007495	Ptbp1	56	63.519	Microtus_ochrogaster
ENSTNIG00000002060	-	88	67.839	MGP_CAROLIEiJ_G0026063	Ptbp3	90	73.485	Mus_caroli
ENSTNIG00000002060	-	89	75.248	MGP_CAROLIEiJ_G0015545	Ptbp1	57	64.378	Mus_caroli
ENSTNIG00000002060	-	100	56.466	MGP_CAROLIEiJ_G0025581	Ptbp2	75	50.355	Mus_caroli
ENSTNIG00000002060	-	60	36.496	MGP_CAROLIEiJ_G0029463	Hnrnpl	53	40.741	Mus_caroli
ENSTNIG00000002060	-	88	67.839	ENSMUSG00000028382	Ptbp3	90	73.485	Mus_musculus
ENSTNIG00000002060	-	60	36.496	ENSMUSG00000015165	Hnrnpl	53	40.741	Mus_musculus
ENSTNIG00000002060	-	89	75.248	ENSMUSG00000006498	Ptbp1	57	64.378	Mus_musculus
ENSTNIG00000002060	-	100	56.466	ENSMUSG00000028134	Ptbp2	75	50.355	Mus_musculus
ENSTNIG00000002060	-	89	75.248	MGP_PahariEiJ_G0030958	Ptbp1	57	63.519	Mus_pahari
ENSTNIG00000002060	-	60	36.496	MGP_PahariEiJ_G0012697	Hnrnpl	53	40.741	Mus_pahari
ENSTNIG00000002060	-	88	67.839	MGP_PahariEiJ_G0028401	Ptbp3	90	73.485	Mus_pahari
ENSTNIG00000002060	-	100	56.466	MGP_PahariEiJ_G0027027	Ptbp2	75	50.355	Mus_pahari
ENSTNIG00000002060	-	100	56.466	MGP_SPRETEiJ_G0026532	Ptbp2	75	50.355	Mus_spretus
ENSTNIG00000002060	-	60	36.496	MGP_SPRETEiJ_G0030559	Hnrnpl	53	40.741	Mus_spretus
ENSTNIG00000002060	-	88	67.839	MGP_SPRETEiJ_G0027028	Ptbp3	90	73.485	Mus_spretus
ENSTNIG00000002060	-	100	57.328	ENSNLEG00000011253	PTBP2	54	54.357	Nomascus_leucogenys
ENSTNIG00000002060	-	100	62.771	ENSORLG00020001452	PTBP1	59	61.905	Oryzias_latipes_hni
ENSTNIG00000002060	-	100	62.771	ENSORLG00015020649	PTBP1	59	61.905	Oryzias_latipes_hsok
ENSTNIG00000002060	-	100	57.328	ENSPPAG00000039951	PTBP2	54	56.466	Pan_paniscus
ENSTNIG00000002060	-	100	56.410	ENSPTIG00000018047	PTBP2	63	55.794	Panthera_tigris_altaica
ENSTNIG00000002060	-	100	57.328	ENSPTRG00000000987	PTBP2	54	56.466	Pan_troglodytes
ENSTNIG00000002060	-	100	62.931	ENSPREG00000015110	-	61	62.069	Poecilia_reticulata
ENSTNIG00000002060	-	65	70.588	ENSPCAG00000010292	PTBP2	50	71.528	Procavia_capensis
ENSTNIG00000002060	-	100	56.410	ENSPCOG00000020071	PTBP2	55	55.794	Propithecus_coquereli
ENSTNIG00000002060	-	100	56.410	ENSPVAG00000011545	PTBP2	50	55.794	Pteropus_vampyrus
ENSTNIG00000002060	-	80	68.132	ENSPNYG00000005088	-	52	69.186	Pundamilia_nyererei
ENSTNIG00000002060	-	50	67.544	ENSRBIG00000026293	-	50	47.739	Rhinopithecus_bieti
ENSTNIG00000002060	-	100	56.897	ENSRBIG00000031850	PTBP2	60	56.466	Rhinopithecus_bieti
ENSTNIG00000002060	-	100	56.410	ENSRROG00000028620	PTBP2	54	55.983	Rhinopithecus_roxellana
ENSTNIG00000002060	-	100	56.897	ENSSBOG00000029258	PTBP2	55	54.430	Saimiri_boliviensis_boliviensis
ENSTNIG00000002060	-	79	58.696	ENSSPAG00000008948	ptbp3	53	55.051	Stegastes_partitus
ENSTNIG00000002060	-	89	74.384	ENSSSCG00000013421	PTBP1	50	72.961	Sus_scrofa
ENSTNIG00000002060	-	100	56.897	ENSSSCG00000006879	PTBP2	57	56.466	Sus_scrofa
ENSTNIG00000002060	-	88	45.000	ENSTBEG00000002830	PTBP3	54	42.609	Tupaia_belangeri
ENSTNIG00000002060	-	100	56.897	ENSUMAG00000008920	PTBP2	63	56.466	Ursus_maritimus
ENSTNIG00000002060	-	100	84.255	ENSXCOG00000000276	ptbp1a	54	83.830	Xiphophorus_couchianus