EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000002344 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 879 bases
Position: chrUn_random:95732631-95733509
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000004838	zf-C2H2	PF00096.26	6.3e-44	1	7
ENSTNIP00000004838	zf-C2H2	PF00096.26	6.3e-44	2	7
ENSTNIP00000004838	zf-C2H2	PF00096.26	6.3e-44	3	7
ENSTNIP00000004838	zf-C2H2	PF00096.26	6.3e-44	4	7
ENSTNIP00000004838	zf-C2H2	PF00096.26	6.3e-44	5	7
ENSTNIP00000004838	zf-C2H2	PF00096.26	6.3e-44	6	7
ENSTNIP00000004838	zf-C2H2	PF00096.26	6.3e-44	7	7
ENSTNIP00000004838	zf-met	PF12874.7	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000004984	-	879	-	ENSTNIP00000004838	293 (aa)	-	H3C9B6

Gene Model

Click here to download ENSTNIG00000002344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000002344	-	99	34.091	ENSTNIG00000018384	scrt1b	57	34.091
ENSTNIG00000002344	-	100	37.156	ENSTNIG00000000528	-	96	37.156
ENSTNIG00000002344	-	99	37.500	ENSTNIG00000001921	-	65	37.500
ENSTNIG00000002344	-	100	39.706	ENSTNIG00000008504	snai2	79	39.706
ENSTNIG00000002344	-	87	46.835	ENSTNIG00000003479	-	100	46.835
ENSTNIG00000002344	-	100	50.617	ENSTNIG00000000320	-	99	50.617
ENSTNIG00000002344	-	100	32.601	ENSTNIG00000003880	znf319b	89	34.314
ENSTNIG00000002344	-	100	39.357	ENSTNIG00000005479	-	99	41.447
ENSTNIG00000002344	-	100	34.615	ENSTNIG00000001159	si:dkey-89b17.4	99	34.252
ENSTNIG00000002344	-	100	36.900	ENSTNIG00000008154	-	99	36.900
ENSTNIG00000002344	-	100	43.902	ENSTNIG00000018984	-	99	45.847
ENSTNIG00000002344	-	99	41.818	ENSTNIG00000017000	-	100	41.818
ENSTNIG00000002344	-	100	35.268	ENSTNIG00000008100	-	100	35.268
ENSTNIG00000002344	-	100	39.631	ENSTNIG00000010722	GZF1	50	39.631
ENSTNIG00000002344	-	100	35.909	ENSTNIG00000016189	zbtb16b	56	35.909
ENSTNIG00000002344	-	100	39.516	ENSTNIG00000008200	-	100	39.516
ENSTNIG00000002344	-	100	32.653	ENSTNIG00000007805	zbtb41	50	32.653
ENSTNIG00000002344	-	100	49.068	ENSTNIG00000000277	-	93	49.068
ENSTNIG00000002344	-	100	39.062	ENSTNIG00000002343	-	83	39.062
ENSTNIG00000002344	-	99	46.961	ENSTNIG00000000330	-	100	42.520
ENSTNIG00000002344	-	99	33.696	ENSTNIG00000011746	hinfp	56	33.696
ENSTNIG00000002344	-	99	39.362	ENSTNIG00000009831	-	95	39.362
ENSTNIG00000002344	-	100	36.145	ENSTNIG00000012449	zbtb48	53	36.429
ENSTNIG00000002344	-	99	43.426	ENSTNIG00000005856	-	99	43.426
ENSTNIG00000002344	-	100	37.743	ENSTNIG00000011188	-	98	37.743
ENSTNIG00000002344	-	99	39.189	ENSTNIG00000012473	scrt2	54	35.075
ENSTNIG00000002344	-	100	39.545	ENSTNIG00000005023	-	99	39.545
ENSTNIG00000002344	-	100	35.443	ENSTNIG00000005798	zbtb16a	55	35.443
ENSTNIG00000002344	-	99	42.857	ENSTNIG00000003834	gfi1b	58	42.857
ENSTNIG00000002344	-	100	41.532	ENSTNIG00000003979	-	99	41.532
ENSTNIG00000002344	-	100	40.391	ENSTNIG00000001164	ZNF628	99	40.391
ENSTNIG00000002344	-	100	42.667	ENSTNIG00000018001	e4f1	57	42.667
ENSTNIG00000002344	-	99	32.841	ENSTNIG00000014443	prdm9	66	32.841
ENSTNIG00000002344	-	99	48.571	ENSTNIG00000000934	-	100	48.571
ENSTNIG00000002344	-	100	35.714	ENSTNIG00000005901	prdm5	73	36.022
ENSTNIG00000002344	-	84	36.301	ENSTNIG00000003865	-	56	36.301
ENSTNIG00000002344	-	100	43.956	ENSTNIG00000008242	-	99	43.956
ENSTNIG00000002344	-	100	36.102	ENSTNIG00000019069	-	100	35.398
ENSTNIG00000002344	-	100	37.857	ENSTNIG00000011367	znf710b	52	37.857
ENSTNIG00000002344	-	100	36.538	ENSTNIG00000000073	znf646	98	36.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002344	-	100	76.412	ENSAPOG00000023008	-	59	76.412	Acanthochromis_polyacanthus
ENSTNIG00000002344	-	99	45.614	ENSAPOG00000021966	-	51	45.614	Acanthochromis_polyacanthus
ENSTNIG00000002344	-	100	45.415	ENSAPOG00000009709	-	64	45.415	Acanthochromis_polyacanthus
ENSTNIG00000002344	-	93	50.000	ENSAPOG00000004997	-	97	50.000	Acanthochromis_polyacanthus
ENSTNIG00000002344	-	99	44.805	ENSACIG00000007096	-	77	44.805	Amphilophus_citrinellus
ENSTNIG00000002344	-	99	44.737	ENSACIG00000006228	-	81	44.737	Amphilophus_citrinellus
ENSTNIG00000002344	-	100	73.090	ENSACIG00000022738	-	97	64.103	Amphilophus_citrinellus
ENSTNIG00000002344	-	100	77.741	ENSAOCG00000016409	-	59	77.741	Amphiprion_ocellaris
ENSTNIG00000002344	-	99	46.243	ENSAOCG00000022529	-	51	46.243	Amphiprion_ocellaris
ENSTNIG00000002344	-	100	77.409	ENSAPEG00000008746	-	59	77.409	Amphiprion_percula
ENSTNIG00000002344	-	99	41.860	ENSAPEG00000009553	-	51	41.860	Amphiprion_percula
ENSTNIG00000002344	-	100	43.038	ENSATEG00000021602	-	73	43.038	Anabas_testudineus
ENSTNIG00000002344	-	100	44.538	ENSATEG00000022064	-	95	44.269	Anabas_testudineus
ENSTNIG00000002344	-	100	48.800	ENSATEG00000014684	-	97	45.946	Anabas_testudineus
ENSTNIG00000002344	-	100	75.083	ENSATEG00000015238	-	58	75.083	Anabas_testudineus
ENSTNIG00000002344	-	100	46.354	ENSACLG00000019482	-	76	46.354	Astatotilapia_calliptera
ENSTNIG00000002344	-	100	44.041	ENSACLG00000001368	-	90	44.041	Astatotilapia_calliptera
ENSTNIG00000002344	-	100	45.783	ENSACLG00000005795	-	62	45.783	Astatotilapia_calliptera
ENSTNIG00000002344	-	99	46.471	ENSACLG00000008374	-	52	46.471	Astatotilapia_calliptera
ENSTNIG00000002344	-	100	37.778	ENSACLG00000013531	-	93	37.778	Astatotilapia_calliptera
ENSTNIG00000002344	-	100	39.855	ENSACLG00000019349	-	72	39.855	Astatotilapia_calliptera
ENSTNIG00000002344	-	100	45.588	ENSACLG00000022482	-	80	45.588	Astatotilapia_calliptera
ENSTNIG00000002344	-	100	72.425	ENSACLG00000015462	-	61	72.425	Astatotilapia_calliptera
ENSTNIG00000002344	-	100	47.788	ENSACLG00000014365	-	97	40.323	Astatotilapia_calliptera
ENSTNIG00000002344	-	100	45.455	ENSACLG00000006718	-	56	45.455	Astatotilapia_calliptera
ENSTNIG00000002344	-	100	48.705	ENSACLG00000011239	-	69	48.705	Astatotilapia_calliptera
ENSTNIG00000002344	-	100	45.455	ENSACLG00000020333	-	56	45.455	Astatotilapia_calliptera
ENSTNIG00000002344	-	91	51.111	ENSACLG00000018716	-	73	51.111	Astatotilapia_calliptera
ENSTNIG00000002344	-	100	40.000	ENSAMXG00000034934	-	95	40.000	Astyanax_mexicanus
ENSTNIG00000002344	-	100	47.664	ENSAMXG00000007973	-	90	45.946	Astyanax_mexicanus
ENSTNIG00000002344	-	100	43.210	ENSCSEG00000019848	-	58	43.210	Cynoglossus_semilaevis
ENSTNIG00000002344	-	89	35.802	ENSCSEG00000019599	-	85	35.802	Cynoglossus_semilaevis
ENSTNIG00000002344	-	88	47.778	ENSCVAG00000010887	-	53	47.778	Cyprinodon_variegatus
ENSTNIG00000002344	-	100	39.394	ENSCVAG00000020968	-	54	39.252	Cyprinodon_variegatus
ENSTNIG00000002344	-	99	46.067	ENSCVAG00000021152	-	50	46.067	Cyprinodon_variegatus
ENSTNIG00000002344	-	100	70.432	ENSCVAG00000019097	-	64	70.432	Cyprinodon_variegatus
ENSTNIG00000002344	-	100	45.876	ENSDARG00000079760	zgc:112998	85	45.876	Danio_rerio
ENSTNIG00000002344	-	100	45.876	ENSDARG00000102282	CABZ01063298.1	88	45.876	Danio_rerio
ENSTNIG00000002344	-	100	68.771	ENSELUG00000004677	-	58	68.771	Esox_lucius
ENSTNIG00000002344	-	100	73.422	ENSFHEG00000003460	-	60	73.422	Fundulus_heteroclitus
ENSTNIG00000002344	-	100	41.294	ENSFHEG00000013228	-	56	40.404	Fundulus_heteroclitus
ENSTNIG00000002344	-	100	69.435	ENSGMOG00000009187	ZNF626	80	69.435	Gadus_morhua
ENSTNIG00000002344	-	100	55.224	ENSGMOG00000017518	-	63	55.224	Gadus_morhua
ENSTNIG00000002344	-	100	42.500	ENSGAFG00000007532	-	81	42.500	Gambusia_affinis
ENSTNIG00000002344	-	100	72.757	ENSGAFG00000001481	-	74	72.757	Gambusia_affinis
ENSTNIG00000002344	-	100	45.223	ENSGAGG00000015232	-	68	45.223	Gopherus_agassizii
ENSTNIG00000002344	-	100	72.425	ENSHBUG00000019377	-	61	72.425	Haplochromis_burtoni
ENSTNIG00000002344	-	99	42.963	ENSHBUG00000020544	-	89	42.963	Haplochromis_burtoni
ENSTNIG00000002344	-	99	46.471	ENSHBUG00000017924	-	52	46.471	Haplochromis_burtoni
ENSTNIG00000002344	-	100	42.697	ENSHBUG00000009274	-	90	42.697	Haplochromis_burtoni
ENSTNIG00000002344	-	100	41.463	ENSHBUG00000020527	-	93	41.463	Haplochromis_burtoni
ENSTNIG00000002344	-	100	46.061	ENSHBUG00000013065	-	56	46.061	Haplochromis_burtoni
ENSTNIG00000002344	-	100	49.153	ENSHBUG00000017251	-	100	49.153	Haplochromis_burtoni
ENSTNIG00000002344	-	100	44.785	ENSHBUG00000011944	-	59	44.785	Haplochromis_burtoni
ENSTNIG00000002344	-	100	62.458	ENSIPUG00000022266	ZNF135	61	62.458	Ictalurus_punctatus
ENSTNIG00000002344	-	99	73.579	ENSKMAG00000015304	-	60	73.579	Kryptolebias_marmoratus
ENSTNIG00000002344	-	100	49.309	ENSKMAG00000000802	-	80	49.309	Kryptolebias_marmoratus
ENSTNIG00000002344	-	100	42.775	ENSLBEG00000008850	-	55	42.775	Labrus_bergylta
ENSTNIG00000002344	-	97	49.333	ENSLBEG00000008909	-	72	49.333	Labrus_bergylta
ENSTNIG00000002344	-	100	44.545	ENSLBEG00000009663	-	52	44.545	Labrus_bergylta
ENSTNIG00000002344	-	100	46.330	ENSLBEG00000026457	-	96	49.020	Labrus_bergylta
ENSTNIG00000002344	-	100	43.379	ENSLOCG00000017422	-	76	43.379	Lepisosteus_oculatus
ENSTNIG00000002344	-	100	44.144	ENSMAMG00000002083	-	94	39.189	Mastacembelus_armatus
ENSTNIG00000002344	-	89	47.500	ENSMAMG00000015434	-	68	47.500	Mastacembelus_armatus
ENSTNIG00000002344	-	100	75.083	ENSMAMG00000010902	-	58	75.083	Mastacembelus_armatus
ENSTNIG00000002344	-	100	55.000	ENSMZEG00005023565	-	72	55.000	Maylandia_zebra
ENSTNIG00000002344	-	98	36.757	ENSMZEG00005003951	-	77	36.757	Maylandia_zebra
ENSTNIG00000002344	-	100	43.182	ENSMZEG00005027551	-	91	41.350	Maylandia_zebra
ENSTNIG00000002344	-	100	46.061	ENSMZEG00005011812	-	56	46.061	Maylandia_zebra
ENSTNIG00000002344	-	100	72.425	ENSMZEG00005018502	-	61	72.425	Maylandia_zebra
ENSTNIG00000002344	-	100	50.202	ENSMZEG00005020568	-	77	50.202	Maylandia_zebra
ENSTNIG00000002344	-	100	50.000	ENSMZEG00005022884	-	92	50.000	Maylandia_zebra
ENSTNIG00000002344	-	100	45.205	ENSMZEG00005025725	-	96	45.205	Maylandia_zebra
ENSTNIG00000002344	-	99	46.471	ENSMZEG00005011431	-	98	44.643	Maylandia_zebra
ENSTNIG00000002344	-	100	40.455	ENSMZEG00005025006	-	89	40.455	Maylandia_zebra
ENSTNIG00000002344	-	100	41.176	ENSMZEG00005028563	-	85	41.176	Maylandia_zebra
ENSTNIG00000002344	-	100	40.078	ENSMZEG00005025125	-	93	40.078	Maylandia_zebra
ENSTNIG00000002344	-	100	44.681	ENSMZEG00005012676	-	89	44.681	Maylandia_zebra
ENSTNIG00000002344	-	100	44.785	ENSMZEG00005025965	-	58	44.785	Maylandia_zebra
ENSTNIG00000002344	-	100	79.734	ENSMMOG00000009252	-	64	79.734	Mola_mola
ENSTNIG00000002344	-	100	42.754	ENSMMOG00000005437	-	54	42.754	Mola_mola
ENSTNIG00000002344	-	99	46.405	ENSMALG00000005696	-	51	46.259	Monopterus_albus
ENSTNIG00000002344	-	100	71.429	ENSMALG00000011756	-	59	71.429	Monopterus_albus
ENSTNIG00000002344	-	100	52.500	ENSMALG00000010959	-	89	44.130	Monopterus_albus
ENSTNIG00000002344	-	100	47.727	ENSMALG00000002956	-	95	47.727	Monopterus_albus
ENSTNIG00000002344	-	100	44.382	ENSNBRG00000004723	-	85	44.382	Neolamprologus_brichardi
ENSTNIG00000002344	-	99	46.471	ENSNBRG00000004792	-	54	46.471	Neolamprologus_brichardi
ENSTNIG00000002344	-	100	48.305	ENSNBRG00000016639	-	52	48.305	Neolamprologus_brichardi
ENSTNIG00000002344	-	100	45.402	ENSNBRG00000019004	-	64	45.402	Neolamprologus_brichardi
ENSTNIG00000002344	-	100	73.090	ENSNBRG00000024179	-	61	73.090	Neolamprologus_brichardi
ENSTNIG00000002344	-	99	45.276	ENSONIG00000012374	-	98	45.276	Oreochromis_niloticus
ENSTNIG00000002344	-	100	64.207	ENSONIG00000019139	-	100	64.748	Oreochromis_niloticus
ENSTNIG00000002344	-	100	42.697	ENSONIG00000014012	-	83	42.697	Oreochromis_niloticus
ENSTNIG00000002344	-	100	43.969	ENSONIG00000020667	-	97	43.969	Oreochromis_niloticus
ENSTNIG00000002344	-	100	44.583	ENSONIG00000001986	-	96	44.583	Oreochromis_niloticus
ENSTNIG00000002344	-	100	52.586	ENSONIG00000015024	-	84	52.586	Oreochromis_niloticus
ENSTNIG00000002344	-	100	50.739	ENSONIG00000008297	-	93	50.739	Oreochromis_niloticus
ENSTNIG00000002344	-	85	44.706	ENSORLG00000012581	-	61	44.706	Oryzias_latipes
ENSTNIG00000002344	-	100	69.900	ENSOMEG00000015179	-	68	69.900	Oryzias_melastigma
ENSTNIG00000002344	-	100	40.614	ENSPKIG00000015951	-	73	40.614	Paramormyrops_kingsleyae
ENSTNIG00000002344	-	100	45.320	ENSPMGG00000008518	-	94	45.320	Periophthalmus_magnuspinnatus
ENSTNIG00000002344	-	100	39.594	ENSPMGG00000020606	-	95	39.594	Periophthalmus_magnuspinnatus
ENSTNIG00000002344	-	100	73.754	ENSPFOG00000000667	-	63	73.754	Poecilia_formosa
ENSTNIG00000002344	-	100	46.233	ENSPFOG00000018771	-	62	46.233	Poecilia_formosa
ENSTNIG00000002344	-	100	73.754	ENSPLAG00000013745	-	94	63.158	Poecilia_latipinna
ENSTNIG00000002344	-	99	43.000	ENSPLAG00000005106	-	75	43.000	Poecilia_latipinna
ENSTNIG00000002344	-	99	43.411	ENSPMEG00000020864	-	96	43.411	Poecilia_mexicana
ENSTNIG00000002344	-	100	49.593	ENSPMEG00000022651	-	66	49.593	Poecilia_mexicana
ENSTNIG00000002344	-	99	46.471	ENSPNYG00000016157	-	52	46.471	Pundamilia_nyererei
ENSTNIG00000002344	-	97	47.500	ENSPNYG00000003834	-	88	47.500	Pundamilia_nyererei
ENSTNIG00000002344	-	100	44.785	ENSPNYG00000019325	-	67	44.785	Pundamilia_nyererei
ENSTNIG00000002344	-	100	43.774	ENSPNYG00000020737	-	87	43.774	Pundamilia_nyererei
ENSTNIG00000002344	-	100	45.783	ENSPNYG00000011024	-	62	45.783	Pundamilia_nyererei
ENSTNIG00000002344	-	100	63.455	ENSPNAG00000025882	-	61	63.455	Pygocentrus_nattereri
ENSTNIG00000002344	-	100	46.552	ENSPNAG00000010850	-	72	46.552	Pygocentrus_nattereri
ENSTNIG00000002344	-	100	43.265	ENSPNAG00000011660	-	57	42.593	Pygocentrus_nattereri
ENSTNIG00000002344	-	100	45.973	ENSSFOG00015006083	-	57	45.973	Scleropages_formosus
ENSTNIG00000002344	-	99	38.411	ENSSMAG00000004429	-	89	38.406	Scophthalmus_maximus
ENSTNIG00000002344	-	100	53.333	ENSSMAG00000013663	-	90	53.333	Scophthalmus_maximus
ENSTNIG00000002344	-	100	72.757	ENSSMAG00000013828	-	60	72.757	Scophthalmus_maximus
ENSTNIG00000002344	-	100	76.412	ENSSDUG00000015013	-	59	76.412	Seriola_dumerili
ENSTNIG00000002344	-	100	49.296	ENSSDUG00000023765	-	72	49.296	Seriola_dumerili
ENSTNIG00000002344	-	100	44.444	ENSSDUG00000023764	-	97	43.952	Seriola_dumerili
ENSTNIG00000002344	-	100	76.412	ENSSLDG00000021278	-	59	76.412	Seriola_lalandi_dorsalis
ENSTNIG00000002344	-	100	77.972	ENSSPAG00000007403	-	95	77.972	Stegastes_partitus
ENSTNIG00000002344	-	99	44.970	ENSSPAG00000007691	-	91	44.970	Stegastes_partitus
ENSTNIG00000002344	-	99	50.633	ENSSPAG00000008950	-	68	36.444	Stegastes_partitus
ENSTNIG00000002344	-	100	47.552	ENSTGUG00000018439	-	100	47.552	Taeniopygia_guttata
ENSTNIG00000002344	-	100	45.161	ENSTGUG00000015549	-	100	45.161	Taeniopygia_guttata
ENSTNIG00000002344	-	100	51.429	ENSTGUG00000018254	-	99	51.429	Taeniopygia_guttata
ENSTNIG00000002344	-	100	44.578	ENSTRUG00000023491	-	63	44.578	Takifugu_rubripes
ENSTNIG00000002344	-	99	46.226	ENSXCOG00000020769	-	84	46.226	Xiphophorus_couchianus
ENSTNIG00000002344	-	99	41.216	ENSXCOG00000013306	-	61	41.216	Xiphophorus_couchianus
ENSTNIG00000002344	-	99	44.792	ENSXCOG00000011372	-	94	44.792	Xiphophorus_couchianus
ENSTNIG00000002344	-	100	50.000	ENSXMAG00000024973	-	69	50.000	Xiphophorus_maculatus