EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000002445 (Gene tree)
Gene ID: -
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1761 bases
Position: chr11:2724357-2726117
Accession: ZDB-GENE-040426-779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000004974	FDF	PF09532.10	3.1e-13	1	1
ENSTNIP00000004974	SM-ATX	PF14438.6	4.8e-08	1	1
ENSTNIP00000004974	LSM14	PF12701.7	1.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005120	-	1140	-	ENSTNIP00000004974	379 (aa)	-	H3C9Q2

Gene Model

Click here to download ENSTNIG00000002445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002445's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000002445	lsm14b	84	40.169	ENSTNIG00000010522	lsm14ab	99	41.972
ENSTNIG00000002445	lsm14b	91	46.216	ENSTNIG00000012609	LSM14B	94	46.631

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002445	lsm14b	92	54.645	ENSG00000149657	LSM14B	100	55.870	Homo_sapiens
ENSTNIG00000002445	lsm14b	100	70.483	ENSAPOG00000001780	lsm14b	100	70.483	Acanthochromis_polyacanthus
ENSTNIG00000002445	lsm14b	91	48.507	ENSAMEG00000013430	LSM14B	92	48.492	Ailuropoda_melanoleuca
ENSTNIG00000002445	lsm14b	62	40.249	ENSACIG00000003147	LSM14B	88	39.419	Amphilophus_citrinellus
ENSTNIG00000002445	lsm14b	99	65.508	ENSACIG00000012266	lsm14b	99	67.380	Amphilophus_citrinellus
ENSTNIG00000002445	lsm14b	96	46.354	ENSAOCG00000006667	LSM14B	96	46.354	Amphiprion_ocellaris
ENSTNIG00000002445	lsm14b	100	71.501	ENSAOCG00000012380	lsm14b	100	71.501	Amphiprion_ocellaris
ENSTNIG00000002445	lsm14b	100	67.810	ENSAPEG00000023633	lsm14b	100	67.810	Amphiprion_percula
ENSTNIG00000002445	lsm14b	100	66.237	ENSATEG00000016603	lsm14b	100	66.753	Anabas_testudineus
ENSTNIG00000002445	lsm14b	66	41.980	ENSATEG00000015895	LSM14B	89	41.216	Anabas_testudineus
ENSTNIG00000002445	lsm14b	83	45.455	ENSAPLG00000013203	LSM14B	91	45.550	Anas_platyrhynchos
ENSTNIG00000002445	lsm14b	91	51.374	ENSACAG00000016195	LSM14B	91	51.491	Anolis_carolinensis
ENSTNIG00000002445	lsm14b	92	55.000	ENSANAG00000037915	LSM14B	92	55.000	Aotus_nancymaae
ENSTNIG00000002445	lsm14b	100	65.903	ENSACLG00000019663	lsm14b	100	65.903	Astatotilapia_calliptera
ENSTNIG00000002445	lsm14b	90	55.405	ENSAMXG00000002865	lsm14b	91	56.604	Astyanax_mexicanus
ENSTNIG00000002445	lsm14b	92	49.877	ENSBTAG00000021558	LSM14B	92	49.875	Bos_taurus
ENSTNIG00000002445	lsm14b	92	55.096	ENSCJAG00000014434	LSM14B	92	55.096	Callithrix_jacchus
ENSTNIG00000002445	lsm14b	82	46.027	ENSCAFG00000012518	LSM14B	90	45.983	Canis_familiaris
ENSTNIG00000002445	lsm14b	92	54.372	ENSCAFG00020022150	LSM14B	92	54.596	Canis_lupus_dingo
ENSTNIG00000002445	lsm14b	92	54.645	ENSCHIG00000010284	-	92	54.875	Capra_hircus
ENSTNIG00000002445	lsm14b	94	41.989	ENSCHIG00000022681	-	91	42.286	Capra_hircus
ENSTNIG00000002445	lsm14b	81	52.848	ENSTSYG00000031914	LSM14B	80	52.941	Carlito_syrichta
ENSTNIG00000002445	lsm14b	81	52.648	ENSCAPG00000013059	LSM14B	91	52.648	Cavia_aperea
ENSTNIG00000002445	lsm14b	81	52.978	ENSCPOG00000038080	LSM14B	90	52.978	Cavia_porcellus
ENSTNIG00000002445	lsm14b	93	39.155	ENSCCAG00000024900	-	77	39.566	Cebus_capucinus
ENSTNIG00000002445	lsm14b	92	54.545	ENSCCAG00000021267	LSM14B	92	54.545	Cebus_capucinus
ENSTNIG00000002445	lsm14b	92	54.645	ENSCATG00000036006	LSM14B	92	54.645	Cercocebus_atys
ENSTNIG00000002445	lsm14b	81	52.978	ENSCLAG00000003186	LSM14B	90	52.978	Chinchilla_lanigera
ENSTNIG00000002445	lsm14b	92	49.383	ENSCSAG00000015729	LSM14B	92	49.383	Chlorocebus_sabaeus
ENSTNIG00000002445	lsm14b	62	36.434	ENSCHOG00000006997	-	88	37.705	Choloepus_hoffmanni
ENSTNIG00000002445	lsm14b	91	49.754	ENSCPBG00000027065	LSM14B	92	49.876	Chrysemys_picta_bellii
ENSTNIG00000002445	lsm14b	81	51.863	ENSCANG00000036986	LSM14B	90	51.863	Colobus_angolensis_palliatus
ENSTNIG00000002445	lsm14b	92	55.191	ENSCGRG00001018399	Lsm14b	92	55.191	Cricetulus_griseus_chok1gshd
ENSTNIG00000002445	lsm14b	61	40.351	ENSCGRG00000006111	-	92	40.351	Cricetulus_griseus_crigri
ENSTNIG00000002445	lsm14b	55	42.326	ENSCGRG00000002484	-	84	42.326	Cricetulus_griseus_crigri
ENSTNIG00000002445	lsm14b	93	45.526	ENSCSEG00000020669	LSM14B	91	44.986	Cynoglossus_semilaevis
ENSTNIG00000002445	lsm14b	91	65.556	ENSCSEG00000004722	lsm14b	100	64.975	Cynoglossus_semilaevis
ENSTNIG00000002445	lsm14b	65	39.286	ENSCVAG00000012433	-	88	38.298	Cyprinodon_variegatus
ENSTNIG00000002445	lsm14b	91	56.497	ENSDARG00000025386	lsm14b	91	56.497	Danio_rerio
ENSTNIG00000002445	lsm14b	61	41.727	ENSDNOG00000025246	LSM14B	90	41.727	Dasypus_novemcinctus
ENSTNIG00000002445	lsm14b	82	52.322	ENSDORG00000016683	Lsm14b	79	52.322	Dipodomys_ordii
ENSTNIG00000002445	lsm14b	92	44.504	ENSETEG00000001869	-	90	44.414	Echinops_telfairi
ENSTNIG00000002445	lsm14b	58	43.363	ENSETEG00000011188	-	99	42.979	Echinops_telfairi
ENSTNIG00000002445	lsm14b	61	45.417	ENSEASG00005023218	LSM14B	87	45.417	Equus_asinus_asinus
ENSTNIG00000002445	lsm14b	92	54.496	ENSECAG00000010659	LSM14B	92	54.722	Equus_caballus
ENSTNIG00000002445	lsm14b	57	68.932	ENSEEUG00000007331	LSM14B	76	68.932	Erinaceus_europaeus
ENSTNIG00000002445	lsm14b	90	48.753	ENSELUG00000016299	LSM14B	91	49.863	Esox_lucius
ENSTNIG00000002445	lsm14b	98	56.378	ENSELUG00000005780	lsm14b	99	55.357	Esox_lucius
ENSTNIG00000002445	lsm14b	92	55.464	ENSFCAG00000003248	LSM14B	92	55.710	Felis_catus
ENSTNIG00000002445	lsm14b	82	46.133	ENSFALG00000010618	LSM14B	92	46.174	Ficedula_albicollis
ENSTNIG00000002445	lsm14b	81	52.665	ENSFDAG00000002214	LSM14B	90	52.665	Fukomys_damarensis
ENSTNIG00000002445	lsm14b	100	61.616	ENSFHEG00000006237	lsm14b	100	63.706	Fundulus_heteroclitus
ENSTNIG00000002445	lsm14b	70	43.987	ENSFHEG00000003362	LSM14B	77	45.631	Fundulus_heteroclitus
ENSTNIG00000002445	lsm14b	100	60.105	ENSGMOG00000017115	lsm14b	99	61.417	Gadus_morhua
ENSTNIG00000002445	lsm14b	91	53.806	ENSGALG00000005125	LSM14B	91	55.026	Gallus_gallus
ENSTNIG00000002445	lsm14b	65	42.000	ENSGAFG00000013723	LSM14B	87	42.060	Gambusia_affinis
ENSTNIG00000002445	lsm14b	100	61.168	ENSGAFG00000020318	lsm14b	100	61.168	Gambusia_affinis
ENSTNIG00000002445	lsm14b	99	69.010	ENSGACG00000009973	lsm14b	99	69.010	Gasterosteus_aculeatus
ENSTNIG00000002445	lsm14b	57	43.172	ENSGAGG00000004106	LSM14B	81	43.172	Gopherus_agassizii
ENSTNIG00000002445	lsm14b	82	51.220	ENSGGOG00000005630	LSM14B	86	51.376	Gorilla_gorilla
ENSTNIG00000002445	lsm14b	92	55.833	ENSHGLG00000015055	LSM14B	92	55.833	Heterocephalus_glaber_female
ENSTNIG00000002445	lsm14b	81	52.548	ENSHGLG00100015273	LSM14B	90	52.548	Heterocephalus_glaber_male
ENSTNIG00000002445	lsm14b	93	47.733	ENSHCOG00000018747	LSM14B	91	47.486	Hippocampus_comes
ENSTNIG00000002445	lsm14b	69	53.612	ENSHCOG00000004867	lsm14b	100	53.612	Hippocampus_comes
ENSTNIG00000002445	lsm14b	90	57.382	ENSIPUG00000014946	lsm14b	86	57.851	Ictalurus_punctatus
ENSTNIG00000002445	lsm14b	81	52.978	ENSSTOG00000020482	LSM14B	90	52.978	Ictidomys_tridecemlineatus
ENSTNIG00000002445	lsm14b	91	56.145	ENSJJAG00000012728	Lsm14b	90	56.145	Jaculus_jaculus
ENSTNIG00000002445	lsm14b	52	40.092	ENSKMAG00000012834	-	88	40.278	Kryptolebias_marmoratus
ENSTNIG00000002445	lsm14b	99	65.729	ENSKMAG00000017524	lsm14b	99	68.286	Kryptolebias_marmoratus
ENSTNIG00000002445	lsm14b	66	39.453	ENSLBEG00000007951	LSM14B	86	40.426	Labrus_bergylta
ENSTNIG00000002445	lsm14b	91	73.944	ENSLACG00000003849	LSM14B	79	73.944	Latimeria_chalumnae
ENSTNIG00000002445	lsm14b	90	57.341	ENSLOCG00000003746	lsm14b	91	57.808	Lepisosteus_oculatus
ENSTNIG00000002445	lsm14b	82	52.439	ENSLAFG00000007492	LSM14B	91	52.615	Loxodonta_africana
ENSTNIG00000002445	lsm14b	92	54.918	ENSMFAG00000041479	LSM14B	92	54.918	Macaca_fascicularis
ENSTNIG00000002445	lsm14b	92	54.918	ENSMMUG00000014084	LSM14B	92	54.918	Macaca_mulatta
ENSTNIG00000002445	lsm14b	92	54.918	ENSMNEG00000045573	LSM14B	92	54.918	Macaca_nemestrina
ENSTNIG00000002445	lsm14b	81	51.863	ENSMLEG00000040895	LSM14B	90	51.863	Mandrillus_leucophaeus
ENSTNIG00000002445	lsm14b	95	49.869	ENSMAMG00000024124	LSM14B	90	50.000	Mastacembelus_armatus
ENSTNIG00000002445	lsm14b	100	68.702	ENSMAMG00000020539	lsm14b	100	68.702	Mastacembelus_armatus
ENSTNIG00000002445	lsm14b	100	65.903	ENSMZEG00005000987	lsm14b	100	65.903	Maylandia_zebra
ENSTNIG00000002445	lsm14b	91	47.326	ENSMZEG00005026001	LSM14B	94	47.554	Maylandia_zebra
ENSTNIG00000002445	lsm14b	83	49.284	ENSMGAG00000005300	LSM14B	90	50.578	Meleagris_gallopavo
ENSTNIG00000002445	lsm14b	92	54.372	ENSMAUG00000020700	Lsm14b	92	54.372	Mesocricetus_auratus
ENSTNIG00000002445	lsm14b	92	55.923	ENSMICG00000014675	LSM14B	92	55.923	Microcebus_murinus
ENSTNIG00000002445	lsm14b	92	55.135	ENSMOCG00000020600	Lsm14b	92	55.135	Microtus_ochrogaster
ENSTNIG00000002445	lsm14b	62	37.050	ENSMOCG00000005119	-	93	36.594	Microtus_ochrogaster
ENSTNIG00000002445	lsm14b	90	70.308	ENSMMOG00000020042	lsm14b	94	71.823	Mola_mola
ENSTNIG00000002445	lsm14b	91	47.899	ENSMMOG00000017321	LSM14B	90	47.899	Mola_mola
ENSTNIG00000002445	lsm14b	61	39.860	ENSMODG00000016690	LSM14B	89	39.860	Monodelphis_domestica
ENSTNIG00000002445	lsm14b	96	45.547	ENSMALG00000022251	LSM14B	91	48.077	Monopterus_albus
ENSTNIG00000002445	lsm14b	99	68.267	ENSMALG00000004783	lsm14b	91	69.942	Monopterus_albus
ENSTNIG00000002445	lsm14b	92	56.111	MGP_CAROLIEiJ_G0024770	Lsm14b	92	56.111	Mus_caroli
ENSTNIG00000002445	lsm14b	92	56.111	ENSMUSG00000039108	Lsm14b	92	56.111	Mus_musculus
ENSTNIG00000002445	lsm14b	92	55.647	MGP_PahariEiJ_G0026214	Lsm14b	92	55.647	Mus_pahari
ENSTNIG00000002445	lsm14b	92	56.111	MGP_SPRETEiJ_G0025693	Lsm14b	92	56.111	Mus_spretus
ENSTNIG00000002445	lsm14b	87	46.277	ENSMPUG00000007584	LSM14B	92	46.277	Mustela_putorius_furo
ENSTNIG00000002445	lsm14b	91	55.056	ENSMLUG00000000304	LSM14B	92	55.402	Myotis_lucifugus
ENSTNIG00000002445	lsm14b	54	44.601	ENSNGAG00000016550	Lsm14b	86	43.961	Nannospalax_galili
ENSTNIG00000002445	lsm14b	81	52.174	ENSNLEG00000015757	LSM14B	90	52.174	Nomascus_leucogenys
ENSTNIG00000002445	lsm14b	69	72.789	ENSMEUG00000008267	-	71	73.611	Notamacropus_eugenii
ENSTNIG00000002445	lsm14b	92	56.198	ENSODEG00000004099	LSM14B	92	56.198	Octodon_degus
ENSTNIG00000002445	lsm14b	100	64.394	ENSONIG00000020318	lsm14b	100	66.921	Oreochromis_niloticus
ENSTNIG00000002445	lsm14b	69	56.410	ENSOANG00000003370	LSM14B	96	56.410	Ornithorhynchus_anatinus
ENSTNIG00000002445	lsm14b	82	52.500	ENSOCUG00000006279	LSM14B	91	52.500	Oryctolagus_cuniculus
ENSTNIG00000002445	lsm14b	92	45.799	ENSORLG00000028353	LSM14B	90	45.580	Oryzias_latipes
ENSTNIG00000002445	lsm14b	100	65.561	ENSORLG00000013525	lsm14b	100	65.816	Oryzias_latipes
ENSTNIG00000002445	lsm14b	63	36.122	ENSORLG00020018191	-	85	36.078	Oryzias_latipes_hni
ENSTNIG00000002445	lsm14b	100	62.750	ENSORLG00020020553	lsm14b	100	65.816	Oryzias_latipes_hni
ENSTNIG00000002445	lsm14b	100	62.750	ENSORLG00015016862	lsm14b	100	65.816	Oryzias_latipes_hsok
ENSTNIG00000002445	lsm14b	92	45.799	ENSORLG00015013157	LSM14B	90	45.580	Oryzias_latipes_hsok
ENSTNIG00000002445	lsm14b	65	39.431	ENSOMEG00000000171	-	85	38.889	Oryzias_melastigma
ENSTNIG00000002445	lsm14b	100	64.031	ENSOMEG00000023917	lsm14b	100	65.561	Oryzias_melastigma
ENSTNIG00000002445	lsm14b	92	49.877	ENSOGAG00000003915	LSM14B	92	49.877	Otolemur_garnettii
ENSTNIG00000002445	lsm14b	81	47.383	ENSOARG00000014706	LSM14B	90	47.354	Ovis_aries
ENSTNIG00000002445	lsm14b	82	51.220	ENSPPAG00000035799	LSM14B	86	51.376	Pan_paniscus
ENSTNIG00000002445	lsm14b	92	55.464	ENSPPRG00000009197	LSM14B	92	55.710	Panthera_pardus
ENSTNIG00000002445	lsm14b	61	44.583	ENSPTIG00000021518	LSM14B	90	44.583	Panthera_tigris_altaica
ENSTNIG00000002445	lsm14b	92	54.645	ENSPTRG00000013696	LSM14B	92	54.645	Pan_troglodytes
ENSTNIG00000002445	lsm14b	92	54.918	ENSPANG00000011747	LSM14B	92	54.918	Papio_anubis
ENSTNIG00000002445	lsm14b	91	58.166	ENSPKIG00000003275	lsm14b	88	77.895	Paramormyrops_kingsleyae
ENSTNIG00000002445	lsm14b	82	50.882	ENSPSIG00000014762	LSM14B	91	51.506	Pelodiscus_sinensis
ENSTNIG00000002445	lsm14b	91	55.125	ENSPEMG00000017688	Lsm14b	91	55.125	Peromyscus_maniculatus_bairdii
ENSTNIG00000002445	lsm14b	92	54.447	ENSPCIG00000013405	LSM14B	92	54.620	Phascolarctos_cinereus
ENSTNIG00000002445	lsm14b	100	67.092	ENSPFOG00000005631	lsm14b	100	67.092	Poecilia_formosa
ENSTNIG00000002445	lsm14b	100	66.582	ENSPLAG00000002449	lsm14b	100	66.582	Poecilia_latipinna
ENSTNIG00000002445	lsm14b	89	45.014	ENSPLAG00000005793	LSM14B	90	45.787	Poecilia_latipinna
ENSTNIG00000002445	lsm14b	89	45.480	ENSPMEG00000022953	LSM14B	90	46.067	Poecilia_mexicana
ENSTNIG00000002445	lsm14b	100	67.347	ENSPMEG00000000745	lsm14b	100	67.347	Poecilia_mexicana
ENSTNIG00000002445	lsm14b	62	39.130	ENSPREG00000007828	LSM14B	87	38.800	Poecilia_reticulata
ENSTNIG00000002445	lsm14b	92	55.923	ENSPCOG00000013625	LSM14B	92	55.923	Propithecus_coquereli
ENSTNIG00000002445	lsm14b	73	40.411	ENSPVAG00000017918	LSM14B	90	44.000	Pteropus_vampyrus
ENSTNIG00000002445	lsm14b	90	59.610	ENSPNAG00000012777	lsm14b	91	59.945	Pygocentrus_nattereri
ENSTNIG00000002445	lsm14b	92	50.623	ENSRNOG00000054557	Lsm14b	92	50.623	Rattus_norvegicus
ENSTNIG00000002445	lsm14b	81	51.543	ENSRBIG00000033461	LSM14B	90	51.543	Rhinopithecus_bieti
ENSTNIG00000002445	lsm14b	83	52.424	ENSRROG00000042949	LSM14B	82	52.424	Rhinopithecus_roxellana
ENSTNIG00000002445	lsm14b	81	52.201	ENSSBOG00000032820	LSM14B	90	52.201	Saimiri_boliviensis_boliviensis
ENSTNIG00000002445	lsm14b	82	52.134	ENSSHAG00000015528	LSM14B	87	52.308	Sarcophilus_harrisii
ENSTNIG00000002445	lsm14b	90	55.367	ENSSFOG00015004627	lsm14b	92	56.425	Scleropages_formosus
ENSTNIG00000002445	lsm14b	96	49.105	ENSSMAG00000000135	LSM14B	96	49.105	Scophthalmus_maximus
ENSTNIG00000002445	lsm14b	100	70.127	ENSSMAG00000012725	lsm14b	100	70.127	Scophthalmus_maximus
ENSTNIG00000002445	lsm14b	100	71.646	ENSSDUG00000020977	lsm14b	100	72.911	Seriola_dumerili
ENSTNIG00000002445	lsm14b	97	49.482	ENSSDUG00000022770	LSM14B	91	49.724	Seriola_dumerili
ENSTNIG00000002445	lsm14b	68	40.351	ENSSLDG00000011354	-	89	43.678	Seriola_lalandi_dorsalis
ENSTNIG00000002445	lsm14b	54	40.376	ENSSARG00000007749	-	99	41.784	Sorex_araneus
ENSTNIG00000002445	lsm14b	91	49.029	ENSSPUG00000014360	LSM14B	92	53.936	Sphenodon_punctatus
ENSTNIG00000002445	lsm14b	100	72.368	ENSSPAG00000020915	lsm14b	100	72.632	Stegastes_partitus
ENSTNIG00000002445	lsm14b	65	38.235	ENSSPAG00000018854	-	88	37.698	Stegastes_partitus
ENSTNIG00000002445	lsm14b	92	54.670	ENSSSCG00000026052	LSM14B	76	54.722	Sus_scrofa
ENSTNIG00000002445	lsm14b	82	51.462	ENSTGUG00000007884	LSM14B	91	51.622	Taeniopygia_guttata
ENSTNIG00000002445	lsm14b	91	48.294	ENSTRUG00000001529	LSM14B	91	48.148	Takifugu_rubripes
ENSTNIG00000002445	lsm14b	100	77.608	ENSTRUG00000011354	lsm14b	100	77.608	Takifugu_rubripes
ENSTNIG00000002445	lsm14b	54	76.190	ENSTTRG00000011043	LSM14B	92	38.845	Tursiops_truncatus
ENSTNIG00000002445	lsm14b	90	49.020	ENSUAMG00000025298	LSM14B	90	49.008	Ursus_americanus
ENSTNIG00000002445	lsm14b	90	49.020	ENSUMAG00000000480	LSM14B	90	49.008	Ursus_maritimus
ENSTNIG00000002445	lsm14b	82	52.147	ENSVVUG00000015920	LSM14B	89	52.174	Vulpes_vulpes
ENSTNIG00000002445	lsm14b	84	53.211	ENSXETG00000001997	lsm14b	99	54.242	Xenopus_tropicalis
ENSTNIG00000002445	lsm14b	100	64.031	ENSXMAG00000010013	lsm14b	100	64.031	Xiphophorus_maculatus