EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000002484 (Gene tree)
Gene ID: -
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2452 bases
Position: chrUn_random:22923304-22925755
Accession: ZDB-GENE-040426-2096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005034	RtcB	PF01139.17	1.5e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005180	-	1585	-	ENSTNIP00000005034	505 (aa)	-	H3C9W2

Gene Model

Click here to download ENSTNIG00000002484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002484	rtcb	100	93.465	ENSG00000100220	RTCB	100	93.465	Homo_sapiens
ENSTNIG00000002484	rtcb	100	96.238	ENSAPOG00000006040	rtcb	100	96.238	Acanthochromis_polyacanthus
ENSTNIG00000002484	rtcb	100	93.465	ENSAMEG00000016152	RTCB	100	93.465	Ailuropoda_melanoleuca
ENSTNIG00000002484	rtcb	100	90.891	ENSACIG00000009083	rtcb	100	90.891	Amphilophus_citrinellus
ENSTNIG00000002484	rtcb	100	96.436	ENSAOCG00000005662	rtcb	100	96.522	Amphiprion_ocellaris
ENSTNIG00000002484	rtcb	100	96.436	ENSAPEG00000024701	rtcb	100	96.436	Amphiprion_percula
ENSTNIG00000002484	rtcb	96	91.376	ENSAPEG00000024653	rtcb	100	91.376	Amphiprion_percula
ENSTNIG00000002484	rtcb	100	95.248	ENSATEG00000000618	rtcb	100	95.248	Anabas_testudineus
ENSTNIG00000002484	rtcb	100	89.981	ENSACAG00000014817	RTCB	100	89.981	Anolis_carolinensis
ENSTNIG00000002484	rtcb	72	88.889	ENSANAG00000023724	-	84	88.889	Aotus_nancymaae
ENSTNIG00000002484	rtcb	100	78.218	ENSANAG00000018191	-	91	78.218	Aotus_nancymaae
ENSTNIG00000002484	rtcb	100	94.455	ENSACLG00000008367	rtcb	100	95.217	Astatotilapia_calliptera
ENSTNIG00000002484	rtcb	100	94.455	ENSAMXG00000042320	rtcb	100	94.455	Astyanax_mexicanus
ENSTNIG00000002484	rtcb	100	93.267	ENSBTAG00000011070	RTCB	100	93.267	Bos_taurus
ENSTNIG00000002484	rtcb	100	73.861	WBGene00008877	rtcb-1	100	73.861	Caenorhabditis_elegans
ENSTNIG00000002484	rtcb	100	93.267	ENSCJAG00000006128	RTCB	100	93.267	Callithrix_jacchus
ENSTNIG00000002484	rtcb	100	93.465	ENSCAFG00000001785	RTCB	100	93.465	Canis_familiaris
ENSTNIG00000002484	rtcb	100	89.307	ENSCAFG00000010789	-	100	89.307	Canis_familiaris
ENSTNIG00000002484	rtcb	87	90.000	ENSCAFG00020018953	-	99	90.000	Canis_lupus_dingo
ENSTNIG00000002484	rtcb	100	93.465	ENSCAFG00020004890	-	100	93.465	Canis_lupus_dingo
ENSTNIG00000002484	rtcb	100	93.267	ENSCHIG00000027009	-	100	93.267	Capra_hircus
ENSTNIG00000002484	rtcb	100	93.465	ENSTSYG00000012320	RTCB	100	93.465	Carlito_syrichta
ENSTNIG00000002484	rtcb	94	93.291	ENSCAPG00000011647	RTCB	96	93.291	Cavia_aperea
ENSTNIG00000002484	rtcb	100	93.267	ENSCCAG00000000618	RTCB	100	93.267	Cebus_capucinus
ENSTNIG00000002484	rtcb	100	93.267	ENSCATG00000033424	RTCB	100	93.267	Cercocebus_atys
ENSTNIG00000002484	rtcb	100	93.069	ENSCLAG00000007997	RTCB	100	93.069	Chinchilla_lanigera
ENSTNIG00000002484	rtcb	100	93.069	ENSCSAG00000008351	RTCB	100	93.069	Chlorocebus_sabaeus
ENSTNIG00000002484	rtcb	100	79.406	ENSCHOG00000009123	RTCB	100	79.406	Choloepus_hoffmanni
ENSTNIG00000002484	rtcb	100	92.277	ENSCPBG00000023184	RTCB	100	92.277	Chrysemys_picta_bellii
ENSTNIG00000002484	rtcb	100	81.386	ENSCING00000003830	-	100	81.386	Ciona_intestinalis
ENSTNIG00000002484	rtcb	100	81.386	ENSCSAVG00000008124	-	99	81.386	Ciona_savignyi
ENSTNIG00000002484	rtcb	100	89.901	ENSCANG00000001891	RTCB	100	89.901	Colobus_angolensis_palliatus
ENSTNIG00000002484	rtcb	100	93.465	ENSCGRG00001011173	Rtcb	100	93.465	Cricetulus_griseus_chok1gshd
ENSTNIG00000002484	rtcb	93	93.830	ENSCGRG00000009587	-	96	93.830	Cricetulus_griseus_crigri
ENSTNIG00000002484	rtcb	100	94.257	ENSCSEG00000003986	rtcb	100	94.257	Cynoglossus_semilaevis
ENSTNIG00000002484	rtcb	82	93.750	ENSCVAG00000000569	rtcb	95	93.750	Cyprinodon_variegatus
ENSTNIG00000002484	rtcb	100	95.248	ENSDARG00000101047	rtcb	100	95.248	Danio_rerio
ENSTNIG00000002484	rtcb	80	90.172	ENSDNOG00000012425	RTCB	99	90.172	Dasypus_novemcinctus
ENSTNIG00000002484	rtcb	100	93.267	ENSDORG00000010855	Rtcb	100	93.267	Dipodomys_ordii
ENSTNIG00000002484	rtcb	99	84.095	FBgn0032781	RtcB	99	84.095	Drosophila_melanogaster
ENSTNIG00000002484	rtcb	100	86.931	ENSETEG00000001988	RTCB	100	86.931	Echinops_telfairi
ENSTNIG00000002484	rtcb	100	85.347	ENSEBUG00000014235	rtcb	100	85.347	Eptatretus_burgeri
ENSTNIG00000002484	rtcb	100	93.663	ENSEASG00005019059	RTCB	100	93.663	Equus_asinus_asinus
ENSTNIG00000002484	rtcb	100	93.663	ENSECAG00000023998	RTCB	100	93.663	Equus_caballus
ENSTNIG00000002484	rtcb	89	84.340	ENSEEUG00000006251	RTCB	100	84.340	Erinaceus_europaeus
ENSTNIG00000002484	rtcb	100	82.231	ENSELUG00000009275	rtcb	100	82.231	Esox_lucius
ENSTNIG00000002484	rtcb	100	93.465	ENSFCAG00000026480	RTCB	100	93.465	Felis_catus
ENSTNIG00000002484	rtcb	100	93.465	ENSFALG00000013334	RTCB	100	93.465	Ficedula_albicollis
ENSTNIG00000002484	rtcb	100	93.267	ENSFDAG00000018150	RTCB	100	93.267	Fukomys_damarensis
ENSTNIG00000002484	rtcb	100	95.050	ENSFHEG00000009595	rtcb	100	95.050	Fundulus_heteroclitus
ENSTNIG00000002484	rtcb	100	91.881	ENSGMOG00000018882	rtcb	100	91.881	Gadus_morhua
ENSTNIG00000002484	rtcb	100	92.871	ENSGALG00000012611	RTCB	100	92.871	Gallus_gallus
ENSTNIG00000002484	rtcb	100	94.653	ENSGAFG00000004198	rtcb	100	94.653	Gambusia_affinis
ENSTNIG00000002484	rtcb	100	96.040	ENSGACG00000000586	rtcb	100	96.040	Gasterosteus_aculeatus
ENSTNIG00000002484	rtcb	93	91.702	ENSGAGG00000019133	RTCB	98	91.702	Gopherus_agassizii
ENSTNIG00000002484	rtcb	100	93.465	ENSGGOG00000011402	RTCB	100	93.465	Gorilla_gorilla
ENSTNIG00000002484	rtcb	100	94.455	ENSHBUG00000020571	rtcb	100	94.455	Haplochromis_burtoni
ENSTNIG00000002484	rtcb	100	93.267	ENSHGLG00000004492	RTCB	100	93.267	Heterocephalus_glaber_female
ENSTNIG00000002484	rtcb	93	67.377	ENSHGLG00000001066	-	99	67.377	Heterocephalus_glaber_female
ENSTNIG00000002484	rtcb	100	93.267	ENSHGLG00100008965	RTCB	100	93.267	Heterocephalus_glaber_male
ENSTNIG00000002484	rtcb	100	93.886	ENSHCOG00000006450	rtcb	100	93.886	Hippocampus_comes
ENSTNIG00000002484	rtcb	100	93.861	ENSIPUG00000015443	rtcb	100	93.861	Ictalurus_punctatus
ENSTNIG00000002484	rtcb	100	93.069	ENSSTOG00000003878	RTCB	100	93.069	Ictidomys_tridecemlineatus
ENSTNIG00000002484	rtcb	100	93.861	ENSJJAG00000010667	Rtcb	100	93.861	Jaculus_jaculus
ENSTNIG00000002484	rtcb	100	94.455	ENSKMAG00000013178	rtcb	100	94.455	Kryptolebias_marmoratus
ENSTNIG00000002484	rtcb	100	93.465	ENSLBEG00000000214	rtcb	100	93.465	Labrus_bergylta
ENSTNIG00000002484	rtcb	100	94.653	ENSLBEG00000010566	RTCB	100	94.653	Labrus_bergylta
ENSTNIG00000002484	rtcb	100	92.871	ENSLACG00000013033	RTCB	100	92.871	Latimeria_chalumnae
ENSTNIG00000002484	rtcb	100	94.455	ENSLOCG00000016515	rtcb	99	94.455	Lepisosteus_oculatus
ENSTNIG00000002484	rtcb	100	92.871	ENSLAFG00000002082	RTCB	100	92.871	Loxodonta_africana
ENSTNIG00000002484	rtcb	100	93.069	ENSMFAG00000034419	RTCB	100	93.069	Macaca_fascicularis
ENSTNIG00000002484	rtcb	100	93.069	ENSMMUG00000006720	RTCB	100	93.069	Macaca_mulatta
ENSTNIG00000002484	rtcb	100	93.069	ENSMNEG00000040669	RTCB	100	93.069	Macaca_nemestrina
ENSTNIG00000002484	rtcb	100	93.267	ENSMLEG00000040505	RTCB	100	93.267	Mandrillus_leucophaeus
ENSTNIG00000002484	rtcb	100	95.248	ENSMAMG00000020676	rtcb	100	95.248	Mastacembelus_armatus
ENSTNIG00000002484	rtcb	100	94.455	ENSMZEG00005018942	rtcb	100	94.455	Maylandia_zebra
ENSTNIG00000002484	rtcb	100	92.505	ENSMGAG00000012805	RTCB	100	92.505	Meleagris_gallopavo
ENSTNIG00000002484	rtcb	60	96.460	ENSMAUG00000008301	Rtcb	100	96.460	Mesocricetus_auratus
ENSTNIG00000002484	rtcb	100	93.267	ENSMICG00000013303	-	100	93.267	Microcebus_murinus
ENSTNIG00000002484	rtcb	100	74.059	ENSMICG00000036677	-	100	74.059	Microcebus_murinus
ENSTNIG00000002484	rtcb	100	93.861	ENSMOCG00000002440	Rtcb	100	93.861	Microtus_ochrogaster
ENSTNIG00000002484	rtcb	100	95.842	ENSMMOG00000005987	rtcb	100	95.842	Mola_mola
ENSTNIG00000002484	rtcb	100	93.465	ENSMODG00000001414	RTCB	100	93.465	Monodelphis_domestica
ENSTNIG00000002484	rtcb	100	94.653	ENSMALG00000007603	rtcb	100	94.653	Monopterus_albus
ENSTNIG00000002484	rtcb	100	93.465	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.465	Mus_caroli
ENSTNIG00000002484	rtcb	100	93.465	ENSMUSG00000001783	Rtcb	100	93.465	Mus_musculus
ENSTNIG00000002484	rtcb	100	93.465	MGP_PahariEiJ_G0031396	Rtcb	100	93.465	Mus_pahari
ENSTNIG00000002484	rtcb	100	93.465	MGP_SPRETEiJ_G0016507	Rtcb	100	93.465	Mus_spretus
ENSTNIG00000002484	rtcb	100	93.465	ENSMPUG00000012285	RTCB	100	93.465	Mustela_putorius_furo
ENSTNIG00000002484	rtcb	100	90.730	ENSMLUG00000007803	RTCB	100	90.730	Myotis_lucifugus
ENSTNIG00000002484	rtcb	72	94.667	ENSNGAG00000005093	Rtcb	100	94.667	Nannospalax_galili
ENSTNIG00000002484	rtcb	100	94.653	ENSNBRG00000017202	rtcb	100	94.653	Neolamprologus_brichardi
ENSTNIG00000002484	rtcb	100	93.465	ENSNLEG00000004960	RTCB	100	93.465	Nomascus_leucogenys
ENSTNIG00000002484	rtcb	100	69.505	ENSMEUG00000007809	-	100	69.505	Notamacropus_eugenii
ENSTNIG00000002484	rtcb	73	97.500	ENSOPRG00000003488	RTCB	79	97.500	Ochotona_princeps
ENSTNIG00000002484	rtcb	82	96.226	ENSODEG00000013033	-	100	96.226	Octodon_degus
ENSTNIG00000002484	rtcb	100	62.178	ENSODEG00000005042	-	100	62.178	Octodon_degus
ENSTNIG00000002484	rtcb	100	95.842	ENSONIG00000007474	rtcb	100	95.842	Oreochromis_niloticus
ENSTNIG00000002484	rtcb	100	93.069	ENSOANG00000005524	RTCB	100	93.069	Ornithorhynchus_anatinus
ENSTNIG00000002484	rtcb	93	93.404	ENSOCUG00000008270	RTCB	96	93.404	Oryctolagus_cuniculus
ENSTNIG00000002484	rtcb	100	94.851	ENSORLG00000020093	rtcb	100	94.851	Oryzias_latipes
ENSTNIG00000002484	rtcb	100	94.851	ENSORLG00020003706	rtcb	100	94.851	Oryzias_latipes_hni
ENSTNIG00000002484	rtcb	100	95.050	ENSORLG00015002968	rtcb	100	95.050	Oryzias_latipes_hsok
ENSTNIG00000002484	rtcb	100	94.455	ENSOMEG00000021278	rtcb	100	94.455	Oryzias_melastigma
ENSTNIG00000002484	rtcb	100	92.673	ENSOGAG00000001425	RTCB	100	92.673	Otolemur_garnettii
ENSTNIG00000002484	rtcb	100	93.267	ENSOARG00000018008	RTCB	100	93.267	Ovis_aries
ENSTNIG00000002484	rtcb	100	93.465	ENSPPAG00000028667	RTCB	100	93.465	Pan_paniscus
ENSTNIG00000002484	rtcb	100	93.465	ENSPPRG00000004038	RTCB	100	93.465	Panthera_pardus
ENSTNIG00000002484	rtcb	94	89.053	ENSPTIG00000020499	RTCB	97	90.105	Panthera_tigris_altaica
ENSTNIG00000002484	rtcb	100	93.465	ENSPTRG00000014287	RTCB	100	93.465	Pan_troglodytes
ENSTNIG00000002484	rtcb	100	93.069	ENSPANG00000016035	RTCB	100	93.069	Papio_anubis
ENSTNIG00000002484	rtcb	100	94.059	ENSPKIG00000001881	rtcb	100	94.059	Paramormyrops_kingsleyae
ENSTNIG00000002484	rtcb	91	93.261	ENSPSIG00000011690	RTCB	100	93.261	Pelodiscus_sinensis
ENSTNIG00000002484	rtcb	100	94.653	ENSPMGG00000016672	rtcb	100	94.653	Periophthalmus_magnuspinnatus
ENSTNIG00000002484	rtcb	100	93.465	ENSPEMG00000019548	Rtcb	100	93.465	Peromyscus_maniculatus_bairdii
ENSTNIG00000002484	rtcb	100	90.891	ENSPMAG00000005657	rtcb	100	90.891	Petromyzon_marinus
ENSTNIG00000002484	rtcb	100	93.465	ENSPCIG00000009467	RTCB	100	93.465	Phascolarctos_cinereus
ENSTNIG00000002484	rtcb	100	95.050	ENSPFOG00000003058	rtcb	100	95.050	Poecilia_formosa
ENSTNIG00000002484	rtcb	100	94.851	ENSPLAG00000017663	rtcb	100	94.851	Poecilia_latipinna
ENSTNIG00000002484	rtcb	100	95.050	ENSPMEG00000006227	rtcb	100	95.050	Poecilia_mexicana
ENSTNIG00000002484	rtcb	100	94.653	ENSPREG00000018467	rtcb	100	94.653	Poecilia_reticulata
ENSTNIG00000002484	rtcb	100	93.465	ENSPPYG00000011752	RTCB	100	93.465	Pongo_abelii
ENSTNIG00000002484	rtcb	93	77.119	ENSPCAG00000013641	RTCB	100	77.119	Procavia_capensis
ENSTNIG00000002484	rtcb	100	93.267	ENSPCOG00000017243	RTCB	100	93.267	Propithecus_coquereli
ENSTNIG00000002484	rtcb	93	92.979	ENSPVAG00000002380	RTCB	100	92.979	Pteropus_vampyrus
ENSTNIG00000002484	rtcb	100	94.455	ENSPNYG00000022760	rtcb	100	94.455	Pundamilia_nyererei
ENSTNIG00000002484	rtcb	100	94.653	ENSPNAG00000009209	rtcb	100	94.653	Pygocentrus_nattereri
ENSTNIG00000002484	rtcb	100	93.465	ENSRNOG00000004813	Rtcb	100	93.465	Rattus_norvegicus
ENSTNIG00000002484	rtcb	100	85.375	ENSRBIG00000042090	RTCB	100	85.375	Rhinopithecus_bieti
ENSTNIG00000002484	rtcb	100	88.317	ENSSBOG00000020085	-	100	88.317	Saimiri_boliviensis_boliviensis
ENSTNIG00000002484	rtcb	94	93.460	ENSSHAG00000016277	RTCB	100	93.460	Sarcophilus_harrisii
ENSTNIG00000002484	rtcb	100	92.673	ENSSFOG00015011572	RTCB	100	92.673	Scleropages_formosus
ENSTNIG00000002484	rtcb	100	94.653	ENSSFOG00015000763	rtcb	100	94.653	Scleropages_formosus
ENSTNIG00000002484	rtcb	100	92.277	ENSSMAG00000005096	rtcb	100	92.277	Scophthalmus_maximus
ENSTNIG00000002484	rtcb	100	94.455	ENSSDUG00000012605	rtcb	100	94.455	Seriola_dumerili
ENSTNIG00000002484	rtcb	100	94.455	ENSSLDG00000019458	rtcb	100	94.455	Seriola_lalandi_dorsalis
ENSTNIG00000002484	rtcb	66	91.429	ENSSARG00000004799	-	70	91.429	Sorex_araneus
ENSTNIG00000002484	rtcb	100	91.881	ENSSPUG00000012814	RTCB	100	91.881	Sphenodon_punctatus
ENSTNIG00000002484	rtcb	100	96.436	ENSSPAG00000004623	rtcb	100	96.436	Stegastes_partitus
ENSTNIG00000002484	rtcb	100	93.465	ENSSSCG00000000158	RTCB	100	93.465	Sus_scrofa
ENSTNIG00000002484	rtcb	100	93.465	ENSTGUG00000010947	RTCB	99	93.465	Taeniopygia_guttata
ENSTNIG00000002484	rtcb	91	96.739	ENSTRUG00000009880	rtcb	100	97.590	Takifugu_rubripes
ENSTNIG00000002484	rtcb	100	80.198	ENSTBEG00000004418	RTCB	100	80.198	Tupaia_belangeri
ENSTNIG00000002484	rtcb	93	92.553	ENSTTRG00000006417	RTCB	100	92.553	Tursiops_truncatus
ENSTNIG00000002484	rtcb	100	93.465	ENSUAMG00000022792	RTCB	100	93.465	Ursus_americanus
ENSTNIG00000002484	rtcb	100	93.465	ENSUMAG00000017225	RTCB	100	93.465	Ursus_maritimus
ENSTNIG00000002484	rtcb	100	93.267	ENSVPAG00000005375	RTCB	100	93.267	Vicugna_pacos
ENSTNIG00000002484	rtcb	100	93.465	ENSVVUG00000023408	RTCB	100	93.465	Vulpes_vulpes
ENSTNIG00000002484	rtcb	100	92.079	ENSXETG00000011523	rtcb	100	92.079	Xenopus_tropicalis
ENSTNIG00000002484	rtcb	100	94.653	ENSXMAG00000002855	rtcb	100	94.653	Xiphophorus_maculatus