EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000002554 (Gene tree)
Gene ID: -
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G patch domain containing 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3658 bases
Position: chr5:13123808-13127465
Accession: ZDB-GENE-040914-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005105	DUF1604	PF07713.13	3.5e-37	1	1
ENSTNIP00000005105	G-patch	PF01585.23	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005251	-	2343	-	ENSTNIP00000005105	781 (aa)	-	H3CA33

Gene Model

Click here to download ENSTNIG00000002554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002554's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002554	gpatch1	99	52.404	ENSG00000076650	GPATCH1	81	70.755	Homo_sapiens
ENSTNIG00000002554	gpatch1	99	52.941	ENSAMEG00000015575	GPATCH1	81	52.320	Ailuropoda_melanoleuca
ENSTNIG00000002554	gpatch1	97	82.796	ENSAOCG00000006668	gpatch1	75	82.796	Amphiprion_ocellaris
ENSTNIG00000002554	gpatch1	97	69.001	ENSAPEG00000000026	gpatch1	80	69.032	Amphiprion_percula
ENSTNIG00000002554	gpatch1	97	67.839	ENSATEG00000014494	gpatch1	81	68.050	Anabas_testudineus
ENSTNIG00000002554	gpatch1	94	50.909	ENSAPLG00000007584	GPATCH1	84	50.587	Anas_platyrhynchos
ENSTNIG00000002554	gpatch1	99	52.709	ENSANAG00000027002	GPATCH1	81	52.484	Aotus_nancymaae
ENSTNIG00000002554	gpatch1	97	68.797	ENSACLG00000024740	gpatch1	79	68.381	Astatotilapia_calliptera
ENSTNIG00000002554	gpatch1	97	56.265	ENSAMXG00000020177	gpatch1	86	56.166	Astyanax_mexicanus
ENSTNIG00000002554	gpatch1	99	53.350	ENSBTAG00000000721	GPATCH1	81	52.659	Bos_taurus
ENSTNIG00000002554	gpatch1	81	30.275	WBGene00011109	R07E5.1	51	58.824	Caenorhabditis_elegans
ENSTNIG00000002554	gpatch1	99	53.367	ENSCJAG00000000684	GPATCH1	81	53.161	Callithrix_jacchus
ENSTNIG00000002554	gpatch1	99	54.146	ENSCAFG00000007457	GPATCH1	68	53.558	Canis_familiaris
ENSTNIG00000002554	gpatch1	99	54.146	ENSCAFG00020019731	GPATCH1	81	53.558	Canis_lupus_dingo
ENSTNIG00000002554	gpatch1	97	53.956	ENSCHIG00000019626	GPATCH1	83	53.186	Capra_hircus
ENSTNIG00000002554	gpatch1	93	51.535	ENSCAPG00000008827	GPATCH1	81	51.471	Cavia_aperea
ENSTNIG00000002554	gpatch1	96	53.766	ENSCPOG00000024477	GPATCH1	80	53.446	Cavia_porcellus
ENSTNIG00000002554	gpatch1	99	52.351	ENSCCAG00000024676	GPATCH1	81	52.484	Cebus_capucinus
ENSTNIG00000002554	gpatch1	97	53.282	ENSCATG00000043637	GPATCH1	81	70.755	Cercocebus_atys
ENSTNIG00000002554	gpatch1	95	53.581	ENSCLAG00000003395	-	84	52.542	Chinchilla_lanigera
ENSTNIG00000002554	gpatch1	99	52.099	ENSCSAG00000004743	GPATCH1	81	51.918	Chlorocebus_sabaeus
ENSTNIG00000002554	gpatch1	84	58.065	ENSCHOG00000012865	GPATCH1	74	55.760	Choloepus_hoffmanni
ENSTNIG00000002554	gpatch1	93	53.235	ENSCPBG00000000666	GPATCH1	92	52.432	Chrysemys_picta_bellii
ENSTNIG00000002554	gpatch1	90	34.568	ENSCING00000012518	-	83	34.274	Ciona_intestinalis
ENSTNIG00000002554	gpatch1	80	54.324	ENSCANG00000012540	GPATCH1	75	54.098	Colobus_angolensis_palliatus
ENSTNIG00000002554	gpatch1	93	54.301	ENSCGRG00001016736	Gpatch1	80	53.836	Cricetulus_griseus_chok1gshd
ENSTNIG00000002554	gpatch1	93	47.978	ENSCGRG00000005069	Gpatch1	77	47.767	Cricetulus_griseus_crigri
ENSTNIG00000002554	gpatch1	87	60.870	ENSCSEG00000019456	-	88	71.304	Cynoglossus_semilaevis
ENSTNIG00000002554	gpatch1	97	56.064	ENSDARG00000033418	gpatch1	81	55.886	Danio_rerio
ENSTNIG00000002554	gpatch1	98	53.500	ENSDNOG00000005291	GPATCH1	83	52.436	Dasypus_novemcinctus
ENSTNIG00000002554	gpatch1	98	51.790	ENSDORG00000012546	Gpatch1	83	51.181	Dipodomys_ordii
ENSTNIG00000002554	gpatch1	97	30.504	FBgn0036386	CG8833	68	31.655	Drosophila_melanogaster
ENSTNIG00000002554	gpatch1	84	54.709	ENSETEG00000003626	GPATCH1	72	53.662	Echinops_telfairi
ENSTNIG00000002554	gpatch1	99	38.518	ENSEBUG00000011286	gpatch1	83	38.376	Eptatretus_burgeri
ENSTNIG00000002554	gpatch1	99	53.982	ENSEASG00005021162	GPATCH1	87	53.255	Equus_asinus_asinus
ENSTNIG00000002554	gpatch1	99	53.904	ENSECAG00000022743	GPATCH1	79	53.178	Equus_caballus
ENSTNIG00000002554	gpatch1	79	54.369	ENSEEUG00000012925	GPATCH1	66	53.731	Erinaceus_europaeus
ENSTNIG00000002554	gpatch1	98	56.931	ENSELUG00000018195	gpatch1	80	57.538	Esox_lucius
ENSTNIG00000002554	gpatch1	99	52.010	ENSFCAG00000014917	GPATCH1	81	51.358	Felis_catus
ENSTNIG00000002554	gpatch1	96	52.789	ENSFALG00000007821	GPATCH1	80	52.468	Ficedula_albicollis
ENSTNIG00000002554	gpatch1	93	53.662	ENSFDAG00000003871	GPATCH1	82	53.067	Fukomys_damarensis
ENSTNIG00000002554	gpatch1	97	53.735	ENSGMOG00000003830	gpatch1	88	53.675	Gadus_morhua
ENSTNIG00000002554	gpatch1	97	51.355	ENSGALG00000004839	GPATCH1	84	50.970	Gallus_gallus
ENSTNIG00000002554	gpatch1	97	66.624	ENSGACG00000017544	gpatch1	84	67.890	Gasterosteus_aculeatus
ENSTNIG00000002554	gpatch1	95	52.042	ENSGAGG00000010067	GPATCH1	79	51.783	Gopherus_agassizii
ENSTNIG00000002554	gpatch1	97	52.278	ENSGGOG00000010862	GPATCH1	81	52.394	Gorilla_gorilla
ENSTNIG00000002554	gpatch1	97	69.504	ENSHBUG00000023462	gpatch1	80	69.084	Haplochromis_burtoni
ENSTNIG00000002554	gpatch1	98	53.621	ENSHGLG00000009334	GPATCH1	80	52.995	Heterocephalus_glaber_female
ENSTNIG00000002554	gpatch1	98	53.494	ENSHGLG00100018074	GPATCH1	80	52.865	Heterocephalus_glaber_male
ENSTNIG00000002554	gpatch1	97	58.846	ENSIPUG00000014977	gpatch1	81	58.942	Ictalurus_punctatus
ENSTNIG00000002554	gpatch1	99	52.889	ENSSTOG00000003720	GPATCH1	81	52.577	Ictidomys_tridecemlineatus
ENSTNIG00000002554	gpatch1	97	55.052	ENSJJAG00000023765	Gpatch1	81	54.416	Jaculus_jaculus
ENSTNIG00000002554	gpatch1	97	66.709	ENSKMAG00000017950	gpatch1	82	67.176	Kryptolebias_marmoratus
ENSTNIG00000002554	gpatch1	97	66.420	ENSLBEG00000026527	gpatch1	79	66.378	Labrus_bergylta
ENSTNIG00000002554	gpatch1	94	53.405	ENSLACG00000008130	GPATCH1	80	53.405	Latimeria_chalumnae
ENSTNIG00000002554	gpatch1	97	56.848	ENSLOCG00000001800	gpatch1	81	56.291	Lepisosteus_oculatus
ENSTNIG00000002554	gpatch1	99	52.985	ENSLAFG00000013589	GPATCH1	86	52.113	Loxodonta_africana
ENSTNIG00000002554	gpatch1	99	52.919	ENSMFAG00000034418	GPATCH1	81	70.755	Macaca_fascicularis
ENSTNIG00000002554	gpatch1	99	52.671	ENSMMUG00000011790	GPATCH1	81	69.811	Macaca_mulatta
ENSTNIG00000002554	gpatch1	99	52.795	ENSMNEG00000045084	GPATCH1	81	69.811	Macaca_nemestrina
ENSTNIG00000002554	gpatch1	88	46.713	ENSMLEG00000043840	GPATCH1	77	46.968	Mandrillus_leucophaeus
ENSTNIG00000002554	gpatch1	97	68.672	ENSMZEG00005001926	gpatch1	80	68.256	Maylandia_zebra
ENSTNIG00000002554	gpatch1	97	51.684	ENSMGAG00000005775	GPATCH1	81	51.039	Meleagris_gallopavo
ENSTNIG00000002554	gpatch1	96	48.387	ENSMICG00000004829	GPATCH1	82	47.497	Microcebus_murinus
ENSTNIG00000002554	gpatch1	97	52.994	ENSMOCG00000000174	Gpatch1	82	52.842	Microtus_ochrogaster
ENSTNIG00000002554	gpatch1	99	67.159	ENSMMOG00000002140	gpatch1	87	67.213	Mola_mola
ENSTNIG00000002554	gpatch1	97	51.341	ENSMODG00000012226	GPATCH1	81	50.948	Monodelphis_domestica
ENSTNIG00000002554	gpatch1	97	67.848	ENSMALG00000014386	gpatch1	82	67.718	Monopterus_albus
ENSTNIG00000002554	gpatch1	97	53.411	ENSMUSG00000063808	Gpatch1	98	73.469	Mus_musculus
ENSTNIG00000002554	gpatch1	97	53.351	MGP_PahariEiJ_G0012816	Gpatch1	98	74.490	Mus_pahari
ENSTNIG00000002554	gpatch1	97	53.539	MGP_SPRETEiJ_G0030681	Gpatch1	98	74.490	Mus_spretus
ENSTNIG00000002554	gpatch1	99	53.308	ENSMPUG00000007658	GPATCH1	81	52.842	Mustela_putorius_furo
ENSTNIG00000002554	gpatch1	99	52.971	ENSMLUG00000012161	GPATCH1	82	52.140	Myotis_lucifugus
ENSTNIG00000002554	gpatch1	97	54.264	ENSNGAG00000012455	Gpatch1	81	53.687	Nannospalax_galili
ENSTNIG00000002554	gpatch1	97	53.053	ENSNLEG00000007659	GPATCH1	81	70.755	Nomascus_leucogenys
ENSTNIG00000002554	gpatch1	81	49.538	ENSMEUG00000015174	GPATCH1	68	48.636	Notamacropus_eugenii
ENSTNIG00000002554	gpatch1	96	53.716	ENSODEG00000007103	GPATCH1	80	54.047	Octodon_degus
ENSTNIG00000002554	gpatch1	97	69.794	ENSONIG00000003302	gpatch1	83	69.565	Oreochromis_niloticus
ENSTNIG00000002554	gpatch1	97	53.247	ENSOANG00000012732	GPATCH1	81	53.056	Ornithorhynchus_anatinus
ENSTNIG00000002554	gpatch1	96	54.248	ENSOCUG00000015905	GPATCH1	81	53.488	Oryctolagus_cuniculus
ENSTNIG00000002554	gpatch1	97	68.093	ENSORLG00000018706	gpatch1	80	67.575	Oryzias_latipes
ENSTNIG00000002554	gpatch1	88	71.693	ENSOMEG00000022688	gpatch1	82	67.821	Oryzias_melastigma
ENSTNIG00000002554	gpatch1	98	53.571	ENSOGAG00000004016	GPATCH1	95	52.375	Otolemur_garnettii
ENSTNIG00000002554	gpatch1	96	54.128	ENSOARG00000004365	GPATCH1	81	53.333	Ovis_aries
ENSTNIG00000002554	gpatch1	99	52.599	ENSPPAG00000020990	GPATCH1	81	70.755	Pan_paniscus
ENSTNIG00000002554	gpatch1	99	52.010	ENSPPRG00000017245	GPATCH1	81	51.358	Panthera_pardus
ENSTNIG00000002554	gpatch1	99	53.015	ENSPTIG00000019649	GPATCH1	81	52.393	Panthera_tigris_altaica
ENSTNIG00000002554	gpatch1	99	52.475	ENSPTRG00000010803	GPATCH1	81	70.755	Pan_troglodytes
ENSTNIG00000002554	gpatch1	99	52.985	ENSPANG00000012374	GPATCH1	81	70.755	Papio_anubis
ENSTNIG00000002554	gpatch1	96	56.203	ENSPKIG00000020745	gpatch1	77	56.855	Paramormyrops_kingsleyae
ENSTNIG00000002554	gpatch1	96	52.288	ENSPSIG00000013433	GPATCH1	81	51.562	Pelodiscus_sinensis
ENSTNIG00000002554	gpatch1	97	53.488	ENSPEMG00000000636	Gpatch1	81	52.911	Peromyscus_maniculatus_bairdii
ENSTNIG00000002554	gpatch1	97	52.503	ENSPCIG00000021003	GPATCH1	85	51.139	Phascolarctos_cinereus
ENSTNIG00000002554	gpatch1	84	60.239	ENSPREG00000008264	gpatch1	88	57.005	Poecilia_reticulata
ENSTNIG00000002554	gpatch1	97	50.697	ENSPPYG00000009824	GPATCH1	81	50.575	Pongo_abelii
ENSTNIG00000002554	gpatch1	80	52.650	ENSPCAG00000005931	GPATCH1	60	53.137	Procavia_capensis
ENSTNIG00000002554	gpatch1	96	51.613	ENSPCOG00000009674	GPATCH1	86	51.178	Propithecus_coquereli
ENSTNIG00000002554	gpatch1	92	51.984	ENSPVAG00000017767	GPATCH1	77	51.507	Pteropus_vampyrus
ENSTNIG00000002554	gpatch1	97	69.987	ENSPNYG00000018189	gpatch1	89	69.565	Pundamilia_nyererei
ENSTNIG00000002554	gpatch1	97	56.511	ENSPNAG00000013187	gpatch1	81	56.089	Pygocentrus_nattereri
ENSTNIG00000002554	gpatch1	97	53.806	ENSRNOG00000011584	Gpatch1	81	53.359	Rattus_norvegicus
ENSTNIG00000002554	gpatch1	99	46.883	ENSRBIG00000034723	GPATCH1	82	46.075	Rhinopithecus_bieti
ENSTNIG00000002554	gpatch1	99	53.117	ENSRROG00000024428	GPATCH1	81	69.811	Rhinopithecus_roxellana
ENSTNIG00000002554	gpatch1	99	52.905	ENSSBOG00000034650	GPATCH1	81	52.611	Saimiri_boliviensis_boliviensis
ENSTNIG00000002554	gpatch1	97	51.344	ENSSHAG00000016016	GPATCH1	81	51.220	Sarcophilus_harrisii
ENSTNIG00000002554	gpatch1	97	57.465	ENSSFOG00015011535	gpatch1	80	57.107	Scleropages_formosus
ENSTNIG00000002554	gpatch1	94	71.490	ENSSMAG00000002883	gpatch1	77	71.767	Scophthalmus_maximus
ENSTNIG00000002554	gpatch1	97	66.955	ENSSDUG00000007444	gpatch1	80	67.372	Seriola_dumerili
ENSTNIG00000002554	gpatch1	97	67.367	ENSSLDG00000002856	gpatch1	89	67.250	Seriola_lalandi_dorsalis
ENSTNIG00000002554	gpatch1	84	56.632	ENSSARG00000004108	GPATCH1	71	56.036	Sorex_araneus
ENSTNIG00000002554	gpatch1	99	53.392	ENSSSCG00000002865	GPATCH1	84	53.093	Sus_scrofa
ENSTNIG00000002554	gpatch1	96	52.437	ENSTGUG00000009401	GPATCH1	81	52.632	Taeniopygia_guttata
ENSTNIG00000002554	gpatch1	97	76.326	ENSTRUG00000025081	gpatch1	81	75.679	Takifugu_rubripes
ENSTNIG00000002554	gpatch1	97	76.455	ENSTRUG00000005785	-	81	75.809	Takifugu_rubripes
ENSTNIG00000002554	gpatch1	74	55.682	ENSTBEG00000007750	-	81	54.971	Tupaia_belangeri
ENSTNIG00000002554	gpatch1	92	62.284	ENSTTRG00000012221	GPATCH1	75	60.554	Tursiops_truncatus
ENSTNIG00000002554	gpatch1	99	53.266	ENSUMAG00000014645	GPATCH1	77	74.490	Ursus_maritimus
ENSTNIG00000002554	gpatch1	85	67.429	ENSVPAG00000010313	GPATCH1	75	66.667	Vicugna_pacos
ENSTNIG00000002554	gpatch1	99	54.397	ENSVVUG00000016572	GPATCH1	81	53.816	Vulpes_vulpes
ENSTNIG00000002554	gpatch1	97	45.700	ENSXETG00000018276	gpatch1	84	48.368	Xenopus_tropicalis