EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000002555 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 7326 bases
Position: chrUn_random:52916153-52923478
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	1	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	2	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	3	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	4	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	5	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	6	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	7	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	8	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	9	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	10	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	11	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	12	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	13	14
ENSTNIP00000005106	KH_1	PF00013.29	2.6e-188	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005252	-	3828	-	ENSTNIP00000005106	1276 (aa)	-	H3CA34

Gene Model

Click here to download ENSTNIG00000002555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002555's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000002555	hdlbpb	99	70.094	ENSTNIG00000004185	hdlbpa	100	70.016

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002555	hdlbpb	100	94.049	ENSAPOG00000006904	hdlbpb	99	94.049	Acanthochromis_polyacanthus
ENSTNIG00000002555	hdlbpb	100	89.080	ENSACIG00000016154	hdlbpb	99	89.080	Amphilophus_citrinellus
ENSTNIG00000002555	hdlbpb	100	94.675	ENSAOCG00000004083	hdlbpb	99	94.675	Amphiprion_ocellaris
ENSTNIG00000002555	hdlbpb	100	94.597	ENSAPEG00000012270	hdlbpb	99	94.597	Amphiprion_percula
ENSTNIG00000002555	hdlbpb	100	93.657	ENSATEG00000019877	hdlbpb	99	93.657	Anabas_testudineus
ENSTNIG00000002555	hdlbpb	100	80.658	ENSACAG00000003606	-	99	80.658	Anolis_carolinensis
ENSTNIG00000002555	hdlbpb	100	93.892	ENSACLG00000006618	hdlbpb	99	93.892	Astatotilapia_calliptera
ENSTNIG00000002555	hdlbpb	100	75.625	ENSAMXG00000019946	hdlbpb	99	75.625	Astyanax_mexicanus
ENSTNIG00000002555	hdlbpb	100	93.265	ENSCSEG00000000955	hdlbpb	99	93.265	Cynoglossus_semilaevis
ENSTNIG00000002555	hdlbpb	100	92.874	ENSCVAG00000005345	hdlbpb	99	92.874	Cyprinodon_variegatus
ENSTNIG00000002555	hdlbpb	100	84.169	ENSDARG00000061864	hdlbpb	99	84.169	Danio_rerio
ENSTNIG00000002555	hdlbpb	92	68.819	ENSEBUG00000005304	hdlbpb	96	68.819	Eptatretus_burgeri
ENSTNIG00000002555	hdlbpb	100	65.934	ENSELUG00000019925	hdlbpb	99	76.131	Esox_lucius
ENSTNIG00000002555	hdlbpb	87	33.724	ENSFHEG00000001701	hdlbpb	99	88.645	Fundulus_heteroclitus
ENSTNIG00000002555	hdlbpb	95	87.736	ENSGMOG00000004522	hdlbpb	78	87.736	Gadus_morhua
ENSTNIG00000002555	hdlbpb	100	93.109	ENSGAFG00000005278	hdlbpb	99	93.109	Gambusia_affinis
ENSTNIG00000002555	hdlbpb	100	90.055	ENSGACG00000019361	hdlbpb	100	90.368	Gasterosteus_aculeatus
ENSTNIG00000002555	hdlbpb	100	93.735	ENSHBUG00000018434	hdlbpb	99	93.735	Haplochromis_burtoni
ENSTNIG00000002555	hdlbpb	100	83.034	ENSIPUG00000003291	HDLBP	100	83.751	Ictalurus_punctatus
ENSTNIG00000002555	hdlbpb	100	93.579	ENSKMAG00000016562	hdlbpb	99	93.579	Kryptolebias_marmoratus
ENSTNIG00000002555	hdlbpb	100	94.205	ENSLBEG00000027855	hdlbpb	99	94.205	Labrus_bergylta
ENSTNIG00000002555	hdlbpb	100	70.652	ENSLACG00000007661	hdlbpb	99	70.652	Latimeria_chalumnae
ENSTNIG00000002555	hdlbpb	100	80.814	ENSLOCG00000013909	hdlbpb	99	80.814	Lepisosteus_oculatus
ENSTNIG00000002555	hdlbpb	100	94.049	ENSMAMG00000003035	hdlbpb	99	94.049	Mastacembelus_armatus
ENSTNIG00000002555	hdlbpb	100	93.892	ENSMZEG00005021465	hdlbpb	99	93.892	Maylandia_zebra
ENSTNIG00000002555	hdlbpb	100	93.187	ENSMMOG00000012525	hdlbpb	99	93.500	Mola_mola
ENSTNIG00000002555	hdlbpb	100	91.856	ENSMALG00000008938	hdlbpb	99	91.856	Monopterus_albus
ENSTNIG00000002555	hdlbpb	100	93.970	ENSNBRG00000002236	hdlbpb	99	93.970	Neolamprologus_brichardi
ENSTNIG00000002555	hdlbpb	100	93.735	ENSONIG00000009211	hdlbpb	100	93.735	Oreochromis_niloticus
ENSTNIG00000002555	hdlbpb	100	92.561	ENSORLG00000006581	hdlbpb	99	92.561	Oryzias_latipes
ENSTNIG00000002555	hdlbpb	100	92.717	ENSORLG00020010012	hdlbpb	99	92.717	Oryzias_latipes_hni
ENSTNIG00000002555	hdlbpb	100	92.874	ENSORLG00015006863	hdlbpb	99	92.874	Oryzias_latipes_hsok
ENSTNIG00000002555	hdlbpb	100	93.031	ENSOMEG00000011131	hdlbpb	99	93.280	Oryzias_melastigma
ENSTNIG00000002555	hdlbpb	100	86.218	ENSPKIG00000005966	hdlbpb	99	86.296	Paramormyrops_kingsleyae
ENSTNIG00000002555	hdlbpb	93	91.989	ENSPMGG00000019853	hdlbpb	99	91.989	Periophthalmus_magnuspinnatus
ENSTNIG00000002555	hdlbpb	93	74.536	ENSPMAG00000002131	hdlbpb	100	74.536	Petromyzon_marinus
ENSTNIG00000002555	hdlbpb	92	64.120	ENSPMAG00000000249	-	99	62.821	Petromyzon_marinus
ENSTNIG00000002555	hdlbpb	100	92.763	ENSPFOG00000008755	hdlbpb	99	92.763	Poecilia_formosa
ENSTNIG00000002555	hdlbpb	100	93.187	ENSPLAG00000007055	hdlbpb	99	93.187	Poecilia_latipinna
ENSTNIG00000002555	hdlbpb	100	93.109	ENSPMEG00000001952	hdlbpb	99	93.109	Poecilia_mexicana
ENSTNIG00000002555	hdlbpb	100	93.031	ENSPREG00000012848	hdlbpb	99	93.031	Poecilia_reticulata
ENSTNIG00000002555	hdlbpb	100	93.657	ENSPNYG00000022467	hdlbpb	99	93.695	Pundamilia_nyererei
ENSTNIG00000002555	hdlbpb	100	85.356	ENSPNAG00000011104	hdlbpb	99	85.356	Pygocentrus_nattereri
ENSTNIG00000002555	hdlbpb	100	85.435	ENSSFOG00015023199	hdlbpb	99	85.435	Scleropages_formosus
ENSTNIG00000002555	hdlbpb	100	93.657	ENSSMAG00000008790	hdlbpb	99	93.657	Scophthalmus_maximus
ENSTNIG00000002555	hdlbpb	100	94.518	ENSSDUG00000020694	hdlbpb	99	94.518	Seriola_dumerili
ENSTNIG00000002555	hdlbpb	100	93.887	ENSSLDG00000020807	hdlbpb	99	93.887	Seriola_lalandi_dorsalis
ENSTNIG00000002555	hdlbpb	100	81.206	ENSSPUG00000018688	-	99	81.206	Sphenodon_punctatus
ENSTNIG00000002555	hdlbpb	100	94.832	ENSSPAG00000016969	hdlbpb	99	94.832	Stegastes_partitus
ENSTNIG00000002555	hdlbpb	98	94.575	ENSTRUG00000012888	hdlbpb	99	94.575	Takifugu_rubripes
ENSTNIG00000002555	hdlbpb	100	66.813	ENSXCOG00000001797	hdlbpb	99	66.813	Xiphophorus_couchianus
ENSTNIG00000002555	hdlbpb	100	92.482	ENSXMAG00000015633	hdlbpb	99	92.482	Xiphophorus_maculatus