EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000002560 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2318 bases
Position: chrUn_random:52958282-52960599
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005111	zf-C2H2	PF00096.26	6.8e-17	1	3
ENSTNIP00000005111	zf-C2H2	PF00096.26	6.8e-17	2	3
ENSTNIP00000005111	zf-C2H2	PF00096.26	6.8e-17	3	3
ENSTNIP00000005111	zf-met	PF12874.7	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005257	-	1815	-	ENSTNIP00000005111	604 (aa)	-	H3CA39

Gene Model

Click here to download ENSTNIG00000002560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000002560	-	76	49.206	ENSTNIG00000013771	bcl6aa	68	49.206

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002560	-	59	78.986	ENSG00000161940	BCL6B	87	81.000	Homo_sapiens
ENSTNIG00000002560	-	99	60.992	ENSAPOG00000023214	bcl6b	97	60.992	Acanthochromis_polyacanthus
ENSTNIG00000002560	-	79	54.167	ENSAMEG00000016319	BCL6B	96	54.167	Ailuropoda_melanoleuca
ENSTNIG00000002560	-	82	81.429	ENSACIG00000016645	bcl6b	94	81.429	Amphilophus_citrinellus
ENSTNIG00000002560	-	99	59.835	ENSAPEG00000007673	bcl6b	97	59.835	Amphiprion_percula
ENSTNIG00000002560	-	99	61.221	ENSATEG00000020121	bcl6b	96	61.221	Anabas_testudineus
ENSTNIG00000002560	-	80	54.362	ENSANAG00000038241	BCL6B	97	54.362	Aotus_nancymaae
ENSTNIG00000002560	-	81	83.704	ENSACLG00000006465	bcl6b	93	83.704	Astatotilapia_calliptera
ENSTNIG00000002560	-	78	72.388	ENSAMXG00000012978	bcl6b	81	72.388	Astyanax_mexicanus
ENSTNIG00000002560	-	78	55.714	ENSCJAG00000016905	BCL6B	95	55.714	Callithrix_jacchus
ENSTNIG00000002560	-	79	54.167	ENSCHIG00000013253	BCL6B	96	54.167	Capra_hircus
ENSTNIG00000002560	-	79	54.362	ENSTSYG00000010666	BCL6B	74	79.710	Carlito_syrichta
ENSTNIG00000002560	-	79	54.861	ENSCPOG00000004066	BCL6B	96	54.861	Cavia_porcellus
ENSTNIG00000002560	-	80	54.362	ENSCCAG00000023607	BCL6B	97	54.362	Cebus_capucinus
ENSTNIG00000002560	-	80	54.362	ENSCATG00000006169	BCL6B	97	54.362	Cercocebus_atys
ENSTNIG00000002560	-	79	54.362	ENSCLAG00000014925	BCL6B	96	54.362	Chinchilla_lanigera
ENSTNIG00000002560	-	80	54.362	ENSCSAG00000012171	BCL6B	97	54.362	Chlorocebus_sabaeus
ENSTNIG00000002560	-	80	54.362	ENSCANG00000036710	BCL6B	97	54.362	Colobus_angolensis_palliatus
ENSTNIG00000002560	-	79	54.362	ENSCGRG00001013044	Bcl6b	97	54.362	Cricetulus_griseus_chok1gshd
ENSTNIG00000002560	-	74	48.657	ENSCGRG00000008325	Bcl6b	90	48.830	Cricetulus_griseus_crigri
ENSTNIG00000002560	-	99	58.155	ENSCSEG00000001042	bcl6b	96	58.155	Cynoglossus_semilaevis
ENSTNIG00000002560	-	99	58.843	ENSCVAG00000005449	bcl6b	96	58.843	Cyprinodon_variegatus
ENSTNIG00000002560	-	99	49.440	ENSDARG00000069335	bcl6b	98	49.440	Danio_rerio
ENSTNIG00000002560	-	79	54.167	ENSDNOG00000035586	BCL6B	96	54.167	Dasypus_novemcinctus
ENSTNIG00000002560	-	77	53.472	ENSETEG00000012364	BCL6B	96	53.103	Echinops_telfairi
ENSTNIG00000002560	-	80	53.741	ENSEASG00005017913	BCL6B	96	53.741	Equus_asinus_asinus
ENSTNIG00000002560	-	80	53.741	ENSECAG00000023771	BCL6B	96	53.741	Equus_caballus
ENSTNIG00000002560	-	92	50.348	ENSELUG00000018787	bcl6b	95	50.348	Esox_lucius
ENSTNIG00000002560	-	86	47.463	ENSFCAG00000001356	BCL6B	96	54.167	Felis_catus
ENSTNIG00000002560	-	59	79.710	ENSFDAG00000018237	BCL6B	97	54.000	Fukomys_damarensis
ENSTNIG00000002560	-	99	58.113	ENSFHEG00000001661	bcl6b	96	58.113	Fundulus_heteroclitus
ENSTNIG00000002560	-	99	42.769	ENSGAFG00000005214	bcl6b	89	43.077	Gambusia_affinis
ENSTNIG00000002560	-	81	82.812	ENSGACG00000019349	bcl6b	96	82.812	Gasterosteus_aculeatus
ENSTNIG00000002560	-	59	78.986	ENSGGOG00000009787	BCL6B	97	54.362	Gorilla_gorilla
ENSTNIG00000002560	-	99	58.882	ENSHBUG00000018170	bcl6b	96	58.882	Haplochromis_burtoni
ENSTNIG00000002560	-	80	54.362	ENSHGLG00000013098	BCL6B	97	54.362	Heterocephalus_glaber_female
ENSTNIG00000002560	-	80	54.362	ENSHGLG00100006858	BCL6B	97	54.362	Heterocephalus_glaber_male
ENSTNIG00000002560	-	99	50.729	ENSHCOG00000012012	bcl6b	98	50.891	Hippocampus_comes
ENSTNIG00000002560	-	78	69.173	ENSIPUG00000000555	bcl6b	94	47.557	Ictalurus_punctatus
ENSTNIG00000002560	-	86	57.576	ENSSTOG00000006365	BCL6B	93	57.576	Ictidomys_tridecemlineatus
ENSTNIG00000002560	-	78	56.429	ENSJJAG00000023524	Bcl6b	95	56.429	Jaculus_jaculus
ENSTNIG00000002560	-	99	57.190	ENSKMAG00000018952	bcl6b	97	57.516	Kryptolebias_marmoratus
ENSTNIG00000002560	-	99	57.724	ENSLBEG00000028080	bcl6b	97	57.724	Labrus_bergylta
ENSTNIG00000002560	-	78	56.429	ENSLAFG00000006642	BCL6B	97	54.362	Loxodonta_africana
ENSTNIG00000002560	-	80	54.362	ENSMFAG00000042774	BCL6B	97	54.362	Macaca_fascicularis
ENSTNIG00000002560	-	80	54.362	ENSMMUG00000016268	BCL6B	87	81.000	Macaca_mulatta
ENSTNIG00000002560	-	80	54.362	ENSMNEG00000041667	BCL6B	97	54.362	Macaca_nemestrina
ENSTNIG00000002560	-	80	54.362	ENSMLEG00000037861	BCL6B	97	54.362	Mandrillus_leucophaeus
ENSTNIG00000002560	-	99	60.726	ENSMAMG00000002865	bcl6b	95	60.726	Mastacembelus_armatus
ENSTNIG00000002560	-	99	59.211	ENSMZEG00005021509	bcl6b	96	59.211	Maylandia_zebra
ENSTNIG00000002560	-	80	55.034	ENSMAUG00000018651	Bcl6b	97	55.034	Mesocricetus_auratus
ENSTNIG00000002560	-	79	54.167	ENSMICG00000041989	BCL6B	76	54.167	Microcebus_murinus
ENSTNIG00000002560	-	79	54.362	ENSMOCG00000019797	Bcl6b	97	54.362	Microtus_ochrogaster
ENSTNIG00000002560	-	75	84.672	ENSMMOG00000012539	bcl6b	94	84.672	Mola_mola
ENSTNIG00000002560	-	89	80.769	ENSMALG00000009070	bcl6b	97	82.114	Monopterus_albus
ENSTNIG00000002560	-	80	53.691	MGP_CAROLIEiJ_G0016622	Bcl6b	96	53.691	Mus_caroli
ENSTNIG00000002560	-	78	55.714	ENSMUSG00000000317	Bcl6b	96	53.691	Mus_musculus
ENSTNIG00000002560	-	58	80.435	MGP_PahariEiJ_G0017753	Bcl6b	95	53.472	Mus_pahari
ENSTNIG00000002560	-	78	55.714	MGP_SPRETEiJ_G0017458	Bcl6b	96	53.691	Mus_spretus
ENSTNIG00000002560	-	79	54.167	ENSMPUG00000010670	BCL6B	95	54.167	Mustela_putorius_furo
ENSTNIG00000002560	-	79	54.362	ENSNGAG00000017106	Bcl6b	97	54.362	Nannospalax_galili
ENSTNIG00000002560	-	99	43.243	ENSNBRG00000002571	bcl6b	97	43.561	Neolamprologus_brichardi
ENSTNIG00000002560	-	59	78.986	ENSNLEG00000009340	BCL6B	97	54.362	Nomascus_leucogenys
ENSTNIG00000002560	-	79	54.362	ENSOPRG00000006070	BCL6B	97	54.362	Ochotona_princeps
ENSTNIG00000002560	-	80	55.034	ENSODEG00000017360	BCL6B	98	55.034	Octodon_degus
ENSTNIG00000002560	-	99	56.860	ENSONIG00000004819	bcl6b	99	56.860	Oreochromis_niloticus
ENSTNIG00000002560	-	50	42.553	ENSOCUG00000002274	BCL6B	96	42.553	Oryctolagus_cuniculus
ENSTNIG00000002560	-	98	53.430	ENSORLG00020000238	bcl6b	96	52.883	Oryzias_latipes_hni
ENSTNIG00000002560	-	99	48.600	ENSORLG00015006618	bcl6b	96	53.213	Oryzias_latipes_hsok
ENSTNIG00000002560	-	59	80.597	ENSOGAG00000027908	BCL6B	70	80.597	Otolemur_garnettii
ENSTNIG00000002560	-	79	54.167	ENSOARG00000009610	BCL6B	96	54.167	Ovis_aries
ENSTNIG00000002560	-	59	78.986	ENSPPAG00000033435	BCL6B	97	54.362	Pan_paniscus
ENSTNIG00000002560	-	86	47.463	ENSPPRG00000001009	BCL6B	96	54.167	Panthera_pardus
ENSTNIG00000002560	-	80	54.362	ENSPTRG00000008656	BCL6B	97	54.362	Pan_troglodytes
ENSTNIG00000002560	-	80	54.362	ENSPANG00000024201	BCL6B	97	54.362	Papio_anubis
ENSTNIG00000002560	-	99	40.064	ENSPKIG00000004089	bcl6b	97	43.750	Paramormyrops_kingsleyae
ENSTNIG00000002560	-	95	38.846	ENSPSIG00000013071	BCL6B	86	50.000	Pelodiscus_sinensis
ENSTNIG00000002560	-	58	91.367	ENSPMGG00000004285	bcl6b	84	91.367	Periophthalmus_magnuspinnatus
ENSTNIG00000002560	-	79	54.362	ENSPEMG00000016932	Bcl6b	97	54.362	Peromyscus_maniculatus_bairdii
ENSTNIG00000002560	-	99	50.698	ENSPFOG00000009503	bcl6b	97	50.698	Poecilia_formosa
ENSTNIG00000002560	-	97	56.807	ENSPLAG00000003629	bcl6b	96	56.807	Poecilia_latipinna
ENSTNIG00000002560	-	99	57.447	ENSPMEG00000016714	bcl6b	97	57.447	Poecilia_mexicana
ENSTNIG00000002560	-	80	54.362	ENSPPYG00000007891	BCL6B	97	54.362	Pongo_abelii
ENSTNIG00000002560	-	79	54.167	ENSPCOG00000026491	BCL6B	96	54.167	Propithecus_coquereli
ENSTNIG00000002560	-	98	49.596	ENSPNAG00000025921	bcl6b	95	49.596	Pygocentrus_nattereri
ENSTNIG00000002560	-	87	46.903	ENSRNOG00000059956	Bcl6b	97	54.362	Rattus_norvegicus
ENSTNIG00000002560	-	80	54.362	ENSRROG00000044570	BCL6B	97	54.362	Rhinopithecus_roxellana
ENSTNIG00000002560	-	80	54.362	ENSSBOG00000025653	BCL6B	97	54.362	Saimiri_boliviensis_boliviensis
ENSTNIG00000002560	-	81	53.147	ENSSHAG00000000166	BCL6B	98	52.703	Sarcophilus_harrisii
ENSTNIG00000002560	-	99	58.775	ENSSMAG00000008428	bcl6b	96	58.775	Scophthalmus_maximus
ENSTNIG00000002560	-	99	60.768	ENSSDUG00000020890	bcl6b	97	60.768	Seriola_dumerili
ENSTNIG00000002560	-	99	43.994	ENSSLDG00000021148	bcl6b	61	88.194	Seriola_lalandi_dorsalis
ENSTNIG00000002560	-	56	55.072	ENSSARG00000014055	BCL6B	97	54.054	Sorex_araneus
ENSTNIG00000002560	-	99	60.992	ENSSPAG00000017215	bcl6b	97	60.992	Stegastes_partitus
ENSTNIG00000002560	-	79	54.167	ENSSSCG00000017927	BCL6B	96	54.167	Sus_scrofa
ENSTNIG00000002560	-	99	47.826	ENSTRUG00000013220	bcl6b	98	53.719	Takifugu_rubripes
ENSTNIG00000002560	-	80	54.362	ENSTBEG00000005792	BCL6B	97	54.362	Tupaia_belangeri
ENSTNIG00000002560	-	74	47.321	ENSTTRG00000003982	BCL6B	98	47.321	Tursiops_truncatus
ENSTNIG00000002560	-	79	54.167	ENSUAMG00000021378	BCL6B	96	54.167	Ursus_americanus
ENSTNIG00000002560	-	77	43.939	ENSUMAG00000014629	BCL6B	94	41.060	Ursus_maritimus
ENSTNIG00000002560	-	99	54.950	ENSXCOG00000001753	bcl6b	62	94.853	Xiphophorus_couchianus
ENSTNIG00000002560	-	99	54.262	ENSXMAG00000015613	bcl6b	96	54.262	Xiphophorus_maculatus