EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000002567 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 27071 bases
Position: chrUn_random:4062444-4089514
Accession: ZDB-GENE-040927-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005118	Fox-1_C	PF12414.8	5.8e-41	1	2
ENSTNIP00000005118	Fox-1_C	PF12414.8	5.8e-41	2	2
ENSTNIP00000005118	RRM_1	PF00076.22	5.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005264	-	765	-	ENSTNIP00000005118	255 (aa)	-	H3CA46

Gene Model

Click here to download ENSTNIG00000002567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000002567	rbfox1	93	45.578	ENSTNIG00000008088	rbfox1l	94	44.898
ENSTNIG00000002567	rbfox1	99	50.943	ENSTNIG00000011278	rbfox3b	68	48.276

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002567	rbfox1	100	64.460	ENSG00000078328	RBFOX1	65	62.718	Homo_sapiens
ENSTNIG00000002567	rbfox1	100	70.732	ENSAPOG00000003197	rbfox1	62	68.293	Acanthochromis_polyacanthus
ENSTNIG00000002567	rbfox1	100	62.718	ENSACIG00000005478	rbfox1	68	62.718	Amphilophus_citrinellus
ENSTNIG00000002567	rbfox1	58	79.558	ENSAOCG00000008283	rbfox1	62	79.558	Amphiprion_ocellaris
ENSTNIG00000002567	rbfox1	97	67.871	ENSAPEG00000010636	rbfox1	66	65.462	Amphiprion_percula
ENSTNIG00000002567	rbfox1	58	81.111	ENSATEG00000007513	rbfox1	61	81.111	Anabas_testudineus
ENSTNIG00000002567	rbfox1	100	58.917	ENSAPLG00000013263	RBFOX1	67	57.325	Anas_platyrhynchos
ENSTNIG00000002567	rbfox1	100	56.151	ENSACAG00000004013	RBFOX1	68	54.259	Anolis_carolinensis
ENSTNIG00000002567	rbfox1	100	64.808	ENSANAG00000029527	RBFOX1	64	63.066	Aotus_nancymaae
ENSTNIG00000002567	rbfox1	100	55.873	ENSBTAG00000007210	RBFOX1	67	54.286	Bos_taurus
ENSTNIG00000002567	rbfox1	100	62.500	ENSCJAG00000017351	RBFOX1	63	88.462	Callithrix_jacchus
ENSTNIG00000002567	rbfox1	100	56.825	ENSCAFG00000019082	RBFOX1	64	55.238	Canis_familiaris
ENSTNIG00000002567	rbfox1	50	60.428	ENSCAFG00020024881	RBFOX1	52	60.963	Canis_lupus_dingo
ENSTNIG00000002567	rbfox1	100	56.508	ENSCHIG00000023549	RBFOX1	67	54.921	Capra_hircus
ENSTNIG00000002567	rbfox1	100	64.460	ENSTSYG00000005334	RBFOX1	72	57.006	Carlito_syrichta
ENSTNIG00000002567	rbfox1	100	58.917	ENSCAPG00000017669	RBFOX1	69	57.325	Cavia_aperea
ENSTNIG00000002567	rbfox1	100	58.917	ENSCPOG00000011314	RBFOX1	68	57.325	Cavia_porcellus
ENSTNIG00000002567	rbfox1	100	64.808	ENSCCAG00000023031	RBFOX1	64	63.066	Cebus_capucinus
ENSTNIG00000002567	rbfox1	100	64.460	ENSCATG00000033816	RBFOX1	64	62.718	Cercocebus_atys
ENSTNIG00000002567	rbfox1	100	58.599	ENSCLAG00000012761	RBFOX1	67	57.006	Chinchilla_lanigera
ENSTNIG00000002567	rbfox1	93	55.743	ENSCSAG00000008739	RBFOX1	66	54.054	Chlorocebus_sabaeus
ENSTNIG00000002567	rbfox1	100	65.157	ENSCPBG00000026626	RBFOX1	70	57.787	Chrysemys_picta_bellii
ENSTNIG00000002567	rbfox1	100	64.460	ENSCANG00000033125	RBFOX1	64	62.718	Colobus_angolensis_palliatus
ENSTNIG00000002567	rbfox1	100	58.599	ENSCGRG00001013729	Rbfox1	67	57.006	Cricetulus_griseus_chok1gshd
ENSTNIG00000002567	rbfox1	100	58.599	ENSCGRG00000003272	Rbfox1	67	57.006	Cricetulus_griseus_crigri
ENSTNIG00000002567	rbfox1	100	63.668	ENSCSEG00000008840	rbfox1	66	61.246	Cynoglossus_semilaevis
ENSTNIG00000002567	rbfox1	100	65.972	ENSDARG00000014746	rbfox1	85	59.426	Danio_rerio
ENSTNIG00000002567	rbfox1	100	58.599	ENSDNOG00000043612	RBFOX1	64	57.143	Dasypus_novemcinctus
ENSTNIG00000002567	rbfox1	100	57.962	ENSDORG00000010024	Rbfox1	69	56.369	Dipodomys_ordii
ENSTNIG00000002567	rbfox1	81	52.256	ENSETEG00000003771	RBFOX1	53	50.000	Echinops_telfairi
ENSTNIG00000002567	rbfox1	100	58.917	ENSEASG00005011599	RBFOX1	67	54.921	Equus_asinus_asinus
ENSTNIG00000002567	rbfox1	100	58.917	ENSECAG00000012667	RBFOX1	63	57.325	Equus_caballus
ENSTNIG00000002567	rbfox1	100	64.808	ENSFCAG00000025322	RBFOX1	59	63.066	Felis_catus
ENSTNIG00000002567	rbfox1	90	56.944	ENSFALG00000004027	RBFOX1	72	55.208	Ficedula_albicollis
ENSTNIG00000002567	rbfox1	100	58.599	ENSFDAG00000007388	RBFOX1	67	57.006	Fukomys_damarensis
ENSTNIG00000002567	rbfox1	100	55.556	ENSGALG00000034325	RBFOX1	66	54.054	Gallus_gallus
ENSTNIG00000002567	rbfox1	100	62.500	ENSGAGG00000023681	RBFOX1	71	57.643	Gopherus_agassizii
ENSTNIG00000002567	rbfox1	100	64.460	ENSGGOG00000016871	-	64	62.718	Gorilla_gorilla
ENSTNIG00000002567	rbfox1	100	58.599	ENSHGLG00000016944	RBFOX1	67	57.006	Heterocephalus_glaber_female
ENSTNIG00000002567	rbfox1	100	58.599	ENSHGLG00100003272	RBFOX1	67	57.006	Heterocephalus_glaber_male
ENSTNIG00000002567	rbfox1	100	64.605	ENSHCOG00000016419	rbfox1	69	62.457	Hippocampus_comes
ENSTNIG00000002567	rbfox1	100	66.202	ENSIPUG00000015215	rbfox1	61	92.000	Ictalurus_punctatus
ENSTNIG00000002567	rbfox1	100	58.917	ENSSTOG00000000322	RBFOX1	68	57.325	Ictidomys_tridecemlineatus
ENSTNIG00000002567	rbfox1	100	59.236	ENSJJAG00000002575	Rbfox1	69	57.643	Jaculus_jaculus
ENSTNIG00000002567	rbfox1	100	68.293	ENSLBEG00000014659	rbfox1	67	65.854	Labrus_bergylta
ENSTNIG00000002567	rbfox1	100	59.306	ENSLOCG00000006675	rbfox1	68	57.729	Lepisosteus_oculatus
ENSTNIG00000002567	rbfox1	100	58.730	ENSLAFG00000011480	RBFOX1	87	57.143	Loxodonta_africana
ENSTNIG00000002567	rbfox1	100	64.460	ENSMFAG00000036447	RBFOX1	64	62.718	Macaca_fascicularis
ENSTNIG00000002567	rbfox1	100	64.460	ENSMMUG00000003458	RBFOX1	64	62.718	Macaca_mulatta
ENSTNIG00000002567	rbfox1	100	58.599	ENSMNEG00000032034	RBFOX1	66	57.006	Macaca_nemestrina
ENSTNIG00000002567	rbfox1	100	64.460	ENSMLEG00000015382	RBFOX1	64	62.718	Mandrillus_leucophaeus
ENSTNIG00000002567	rbfox1	100	66.551	ENSMAMG00000003142	rbfox1	62	77.348	Mastacembelus_armatus
ENSTNIG00000002567	rbfox1	55	62.500	ENSMGAG00000008606	RBFOX1	67	62.051	Meleagris_gallopavo
ENSTNIG00000002567	rbfox1	100	64.460	ENSMICG00000034286	RBFOX1	64	62.718	Microcebus_murinus
ENSTNIG00000002567	rbfox1	100	58.599	ENSMOCG00000020932	Rbfox1	70	57.006	Microtus_ochrogaster
ENSTNIG00000002567	rbfox1	100	63.066	ENSMMOG00000009716	rbfox1	66	63.066	Mola_mola
ENSTNIG00000002567	rbfox1	93	56.419	ENSMODG00000005826	RBFOX1	70	54.730	Monodelphis_domestica
ENSTNIG00000002567	rbfox1	100	67.247	ENSMALG00000003337	rbfox1	63	65.505	Monopterus_albus
ENSTNIG00000002567	rbfox1	100	58.599	MGP_CAROLIEiJ_G0020427	Rbfox1	67	57.006	Mus_caroli
ENSTNIG00000002567	rbfox1	100	59.797	ENSMUSG00000008658	Rbfox1	67	62.051	Mus_musculus
ENSTNIG00000002567	rbfox1	100	58.599	MGP_PahariEiJ_G0016135	Rbfox1	67	57.006	Mus_pahari
ENSTNIG00000002567	rbfox1	100	58.599	MGP_SPRETEiJ_G0021321	Rbfox1	67	57.006	Mus_spretus
ENSTNIG00000002567	rbfox1	93	55.405	ENSMPUG00000014822	RBFOX1	63	53.716	Mustela_putorius_furo
ENSTNIG00000002567	rbfox1	100	58.917	ENSMLUG00000015896	RBFOX1	87	57.325	Myotis_lucifugus
ENSTNIG00000002567	rbfox1	100	58.599	ENSNGAG00000023276	Rbfox1	69	57.006	Nannospalax_galili
ENSTNIG00000002567	rbfox1	98	49.831	ENSNBRG00000011084	rbfox1	61	50.847	Neolamprologus_brichardi
ENSTNIG00000002567	rbfox1	100	64.111	ENSNLEG00000010017	-	64	62.369	Nomascus_leucogenys
ENSTNIG00000002567	rbfox1	100	58.599	ENSODEG00000013166	RBFOX1	67	57.006	Octodon_degus
ENSTNIG00000002567	rbfox1	93	55.743	ENSOANG00000002379	RBFOX1	66	54.054	Ornithorhynchus_anatinus
ENSTNIG00000002567	rbfox1	100	58.599	ENSOGAG00000025535	RBFOX1	67	57.006	Otolemur_garnettii
ENSTNIG00000002567	rbfox1	100	64.460	ENSPPAG00000036238	-	66	62.718	Pan_paniscus
ENSTNIG00000002567	rbfox1	100	64.808	ENSPPRG00000006546	RBFOX1	64	63.066	Panthera_pardus
ENSTNIG00000002567	rbfox1	99	54.930	ENSPTIG00000021154	RBFOX1	66	54.225	Panthera_tigris_altaica
ENSTNIG00000002567	rbfox1	100	64.460	ENSPTRG00000007744	RBFOX1	64	62.718	Pan_troglodytes
ENSTNIG00000002567	rbfox1	100	64.460	ENSPANG00000026500	RBFOX1	64	62.718	Papio_anubis
ENSTNIG00000002567	rbfox1	59	74.725	ENSPKIG00000019353	rbfox1	69	67.136	Paramormyrops_kingsleyae
ENSTNIG00000002567	rbfox1	100	65.505	ENSPKIG00000009667	-	67	63.763	Paramormyrops_kingsleyae
ENSTNIG00000002567	rbfox1	100	59.236	ENSPSIG00000006523	RBFOX1	67	57.643	Pelodiscus_sinensis
ENSTNIG00000002567	rbfox1	100	58.599	ENSPEMG00000017607	Rbfox1	67	57.006	Peromyscus_maniculatus_bairdii
ENSTNIG00000002567	rbfox1	70	72.131	ENSPCIG00000026887	RBFOX1	86	53.378	Phascolarctos_cinereus
ENSTNIG00000002567	rbfox1	93	55.743	ENSPPYG00000007079	-	63	54.054	Pongo_abelii
ENSTNIG00000002567	rbfox1	100	56.508	ENSPCAG00000002630	RBFOX1	71	54.921	Procavia_capensis
ENSTNIG00000002567	rbfox1	100	64.460	ENSPCOG00000025687	RBFOX1	64	62.718	Propithecus_coquereli
ENSTNIG00000002567	rbfox1	100	52.063	ENSPVAG00000013467	RBFOX1	64	50.159	Pteropus_vampyrus
ENSTNIG00000002567	rbfox1	100	67.247	ENSPNAG00000023109	rbfox1	65	65.157	Pygocentrus_nattereri
ENSTNIG00000002567	rbfox1	100	58.280	ENSRNOG00000002827	Rbfox1	64	56.688	Rattus_norvegicus
ENSTNIG00000002567	rbfox1	100	64.460	ENSRBIG00000044478	RBFOX1	66	62.718	Rhinopithecus_bieti
ENSTNIG00000002567	rbfox1	100	64.460	ENSRROG00000044411	RBFOX1	64	62.718	Rhinopithecus_roxellana
ENSTNIG00000002567	rbfox1	100	64.808	ENSSBOG00000033726	RBFOX1	64	63.066	Saimiri_boliviensis_boliviensis
ENSTNIG00000002567	rbfox1	100	59.554	ENSSHAG00000009257	RBFOX1	68	57.778	Sarcophilus_harrisii
ENSTNIG00000002567	rbfox1	100	62.718	ENSSFOG00015009955	-	61	60.976	Scleropages_formosus
ENSTNIG00000002567	rbfox1	60	89.362	ENSSFOG00015023675	rbfox1	53	89.362	Scleropages_formosus
ENSTNIG00000002567	rbfox1	100	69.444	ENSSMAG00000015505	rbfox1	67	67.014	Scophthalmus_maximus
ENSTNIG00000002567	rbfox1	100	63.415	ENSSDUG00000016413	rbfox1	64	63.415	Seriola_dumerili
ENSTNIG00000002567	rbfox1	100	63.415	ENSSLDG00000009353	rbfox1	67	63.415	Seriola_lalandi_dorsalis
ENSTNIG00000002567	rbfox1	72	87.234	ENSSPUG00000009732	RBFOX1	66	59.028	Sphenodon_punctatus
ENSTNIG00000002567	rbfox1	100	69.338	ENSSPAG00000009723	rbfox1	63	67.247	Stegastes_partitus
ENSTNIG00000002567	rbfox1	100	58.280	ENSSSCG00000007917	RBFOX1	70	53.716	Sus_scrofa
ENSTNIG00000002567	rbfox1	100	59.236	ENSTGUG00000004562	RBFOX1	69	57.643	Taeniopygia_guttata
ENSTNIG00000002567	rbfox1	100	72.727	ENSTRUG00000020940	rbfox1	67	70.280	Takifugu_rubripes
ENSTNIG00000002567	rbfox1	100	56.190	ENSTTRG00000005700	RBFOX1	64	54.603	Tursiops_truncatus
ENSTNIG00000002567	rbfox1	72	87.234	ENSUAMG00000024633	RBFOX1	68	53.041	Ursus_americanus
ENSTNIG00000002567	rbfox1	100	51.049	ENSUMAG00000003579	RBFOX1	65	50.350	Ursus_maritimus
ENSTNIG00000002567	rbfox1	100	56.190	ENSVPAG00000001284	RBFOX1	64	54.603	Vicugna_pacos
ENSTNIG00000002567	rbfox1	100	64.808	ENSVVUG00000017311	RBFOX1	53	72.826	Vulpes_vulpes