EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTNIG00000002617 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Minus strand
Length
3396 bases
Position
chr21:515135-518530
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000005170GTP_EFTUPF00009.271.8e-5511
ENSTNIP00000005170GTP_EFTU_D2PF03144.251.5e-1411
ENSTNIP00000005170GTP_EFTU_D3PF03143.173.6e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000005316-1570-ENSTNIP00000005170479 (aa)-H3CA98
Gene Model
Click here to download ENSTNIG00000002617's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002617's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000002617-9486.161ENSTNIG00000002618-9786.161
ENSTNIG00000002617-9230.088ENSTNIG00000011624tufm8830.088
ENSTNIG00000002617-9140.046ENSTNIG00000016320hbs1l6340.046
ENSTNIG00000002617-9138.041ENSTNIG00000010212gspt1l8538.041
ENSTNIG00000002617-9485.333ENSTNIG00000009821eef1a1b9785.333
ENSTNIG00000002617-9484.889ENSTNIG00000002619-9983.261
ENSTNIG00000002617-7667.120ENSTNIG00000014156EEF1A19767.120
ENSTNIG00000002617-9769.114ENSTNIG00000017138si:dkey-37o8.19969.114
ENSTNIG00000002617-9137.813ENSTNIG00000012926GSPT17337.813
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000002617-9482.000ENSAPOG00000004714-9980.435Acanthochromis_polyacanthus
ENSTNIG00000002617-8682.482ENSACIG00000001219-9982.482Amphilophus_citrinellus
ENSTNIG00000002617-8482.836ENSAOCG00000022002-9981.068Amphiprion_ocellaris
ENSTNIG00000002617-9483.519ENSAOCG00000022039-9783.519Amphiprion_ocellaris
ENSTNIG00000002617-9483.296ENSAPEG00000016361-9783.296Amphiprion_percula
ENSTNIG00000002617-9484.000ENSATEG00000003244-9782.391Anabas_testudineus
ENSTNIG00000002617-9683.442ENSACLG00000022560-9983.442Astatotilapia_calliptera
ENSTNIG00000002617-9482.444WBGene00001168eef-1A.19782.444Caenorhabditis_elegans
ENSTNIG00000002617-9482.444WBGene00001169eef-1A.28792.537Caenorhabditis_elegans
ENSTNIG00000002617-9380.313ENSCING00000018894-9680.313Ciona_intestinalis
ENSTNIG00000002617-9381.879ENSCING00000021478-9781.879Ciona_intestinalis
ENSTNIG00000002617-9478.319ENSCING00000007703-9678.319Ciona_intestinalis
ENSTNIG00000002617-9479.691ENSCING00000005126-9779.691Ciona_intestinalis
ENSTNIG00000002617-9376.417ENSCSAVG00000001085-8976.417Ciona_savignyi
ENSTNIG00000002617-9481.514ENSCSAVG00000006357-9594.000Ciona_savignyi
ENSTNIG00000002617-9277.679ENSCSAVG00000003196-9577.679Ciona_savignyi
ENSTNIG00000002617-9378.971ENSCSAVG00000009663-9678.971Ciona_savignyi
ENSTNIG00000002617-8780.482ENSCSEG00000007992-10080.482Cynoglossus_semilaevis
ENSTNIG00000002617-8484.080ENSCSEG00000007972-9784.080Cynoglossus_semilaevis
ENSTNIG00000002617-9483.111ENSCSEG00000008011-9981.522Cynoglossus_semilaevis
ENSTNIG00000002617-9484.633ENSCVAG00000019356-9982.826Cyprinodon_variegatus
ENSTNIG00000002617-9580.263FBgn0284245eEF1alpha19880.263Drosophila_melanogaster
ENSTNIG00000002617-9382.103FBgn0000557eEF1alpha29980.260Drosophila_melanogaster
ENSTNIG00000002617-9480.846ENSEBUG00000015814-9880.846Eptatretus_burgeri
ENSTNIG00000002617-9485.714ENSFHEG00000015054-9785.714Fundulus_heteroclitus
ENSTNIG00000002617-9483.742ENSGAFG00000014646-9981.957Gambusia_affinis
ENSTNIG00000002617-9483.556ENSGACG00000002182-9981.957Gasterosteus_aculeatus
ENSTNIG00000002617-9681.957ENSGACG00000002143-9981.957Gasterosteus_aculeatus
ENSTNIG00000002617-5279.200ENSHBUG00000017166-9479.200Haplochromis_burtoni
ENSTNIG00000002617-9483.556ENSHCOG00000008468-9981.957Hippocampus_comes
ENSTNIG00000002617-9483.036ENSHCOG00000008489-9783.036Hippocampus_comes
ENSTNIG00000002617-9683.478ENSLBEG00000002955-10083.478Labrus_bergylta
ENSTNIG00000002617-9482.667ENSLBEG00000002759-9981.087Labrus_bergylta
ENSTNIG00000002617-9484.855ENSMAMG00000007715-9983.043Mastacembelus_armatus
ENSTNIG00000002617-9484.410ENSMMOG00000001106-9784.410Mola_mola
ENSTNIG00000002617-9475.724ENSMMOG00000018160-10088.043Mola_mola
ENSTNIG00000002617-9484.444ENSMMOG00000001165-9993.182Mola_mola
ENSTNIG00000002617-9673.203ENSNBRG00000017346-9973.203Neolamprologus_brichardi
ENSTNIG00000002617-7383.807ENSONIG00000017760-9883.807Oreochromis_niloticus
ENSTNIG00000002617-9484.187ENSORLG00000007614eef1a9982.391Oryzias_latipes
ENSTNIG00000002617-9486.161ENSORLG00015002397-9786.161Oryzias_latipes_hsok
ENSTNIG00000002617-9484.410ENSOMEG00000018226-9982.609Oryzias_melastigma
ENSTNIG00000002617-9485.078ENSPMGG00000023911-9996.512Periophthalmus_magnuspinnatus
ENSTNIG00000002617-9049.302ENSPMGG00000022427-9661.250Periophthalmus_magnuspinnatus
ENSTNIG00000002617-9483.742ENSPFOG00000003924-9981.957Poecilia_formosa
ENSTNIG00000002617-9483.742ENSPLAG00000004316-9981.957Poecilia_latipinna
ENSTNIG00000002617-9483.964ENSPMEG00000001010-9982.174Poecilia_mexicana
ENSTNIG00000002617-9486.161ENSPREG00000008243-9786.161Poecilia_reticulata
ENSTNIG00000002617-9683.442ENSPNYG00000007263-9983.442Pundamilia_nyererei
ENSTNIG00000002617-9377.978YBR118WTEF29877.506Saccharomyces_cerevisiae
ENSTNIG00000002617-9377.978YPR080WTEF19877.506Saccharomyces_cerevisiae
ENSTNIG00000002617-5178.512ENSSMAG00000016277-9975.494Scophthalmus_maximus
ENSTNIG00000002617-9475.212ENSSMAG00000018469-9973.859Scophthalmus_maximus
ENSTNIG00000002617-9483.778ENSSDUG00000008198-9982.174Seriola_dumerili
ENSTNIG00000002617-9482.851ENSSPAG00000001710-9981.087Stegastes_partitus
ENSTNIG00000002617-9684.165ENSTRUG00000005066-10084.165Takifugu_rubripes
ENSTNIG00000002617-9484.889ENSTRUG00000005727ef-1a9983.261Takifugu_rubripes
ENSTNIG00000002617-9483.742ENSXCOG00000001542-9995.349Xiphophorus_couchianus

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