EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000002660 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1774 bases
Position: chrUn_random:6768053-6769826
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005214	PseudoU_synth_2	PF00849.22	1.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005360	-	813	-	ENSTNIP00000005214	271 (aa)	-	H3CAE2

Gene Model

Click here to download ENSTNIG00000002660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002660's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002660	rpusd1	99	52.614	ENSG00000007376	RPUSD1	91	71.591	Homo_sapiens
ENSTNIG00000002660	rpusd1	99	72.277	ENSAPOG00000022221	rpusd1	99	72.277	Acanthochromis_polyacanthus
ENSTNIG00000002660	rpusd1	99	55.405	ENSAMEG00000007461	RPUSD1	98	55.405	Ailuropoda_melanoleuca
ENSTNIG00000002660	rpusd1	96	80.077	ENSACIG00000015863	rpusd1	99	71.010	Amphilophus_citrinellus
ENSTNIG00000002660	rpusd1	99	70.915	ENSAOCG00000021975	rpusd1	96	71.895	Amphiprion_ocellaris
ENSTNIG00000002660	rpusd1	99	71.242	ENSAPEG00000001316	rpusd1	96	72.222	Amphiprion_percula
ENSTNIG00000002660	rpusd1	99	70.033	ENSATEG00000002984	rpusd1	99	69.935	Anabas_testudineus
ENSTNIG00000002660	rpusd1	73	61.000	ENSAPLG00000012316	RPUSD1	83	61.000	Anas_platyrhynchos
ENSTNIG00000002660	rpusd1	99	61.279	ENSACAG00000008953	RPUSD1	99	61.279	Anolis_carolinensis
ENSTNIG00000002660	rpusd1	92	61.660	ENSANAG00000024709	RPUSD1	81	61.660	Aotus_nancymaae
ENSTNIG00000002660	rpusd1	99	70.779	ENSACLG00000013692	rpusd1	99	71.429	Astatotilapia_calliptera
ENSTNIG00000002660	rpusd1	99	65.068	ENSAMXG00000019802	rpusd1	99	65.068	Astyanax_mexicanus
ENSTNIG00000002660	rpusd1	99	56.623	ENSBTAG00000000179	RPUSD1	98	56.623	Bos_taurus
ENSTNIG00000002660	rpusd1	92	61.265	ENSCJAG00000012253	RPUSD1	81	61.265	Callithrix_jacchus
ENSTNIG00000002660	rpusd1	99	55.405	ENSCAFG00000019614	RPUSD1	98	55.405	Canis_familiaris
ENSTNIG00000002660	rpusd1	99	55.405	ENSCAFG00020008891	RPUSD1	98	55.405	Canis_lupus_dingo
ENSTNIG00000002660	rpusd1	99	56.291	ENSCHIG00000012872	RPUSD1	98	56.291	Capra_hircus
ENSTNIG00000002660	rpusd1	99	54.730	ENSTSYG00000036934	RPUSD1	78	76.471	Carlito_syrichta
ENSTNIG00000002660	rpusd1	92	62.055	ENSCAPG00000014219	RPUSD1	83	62.055	Cavia_aperea
ENSTNIG00000002660	rpusd1	92	62.055	ENSCPOG00000034604	RPUSD1	83	62.055	Cavia_porcellus
ENSTNIG00000002660	rpusd1	92	61.265	ENSCCAG00000034385	RPUSD1	81	61.265	Cebus_capucinus
ENSTNIG00000002660	rpusd1	99	53.595	ENSCATG00000042983	RPUSD1	78	75.490	Cercocebus_atys
ENSTNIG00000002660	rpusd1	92	61.660	ENSCLAG00000013966	RPUSD1	83	61.660	Chinchilla_lanigera
ENSTNIG00000002660	rpusd1	99	53.595	ENSCSAG00000012121	RPUSD1	98	53.268	Chlorocebus_sabaeus
ENSTNIG00000002660	rpusd1	99	58.000	ENSCPBG00000021101	RPUSD1	99	58.000	Chrysemys_picta_bellii
ENSTNIG00000002660	rpusd1	92	61.265	ENSCANG00000028576	RPUSD1	78	75.490	Colobus_angolensis_palliatus
ENSTNIG00000002660	rpusd1	99	54.209	ENSCGRG00001014253	Rpusd1	98	54.209	Cricetulus_griseus_chok1gshd
ENSTNIG00000002660	rpusd1	99	54.209	ENSCGRG00000017995	Rpusd1	98	54.209	Cricetulus_griseus_crigri
ENSTNIG00000002660	rpusd1	96	79.231	ENSCSEG00000018512	rpusd1	99	71.918	Cynoglossus_semilaevis
ENSTNIG00000002660	rpusd1	99	71.429	ENSCVAG00000022746	rpusd1	99	71.429	Cyprinodon_variegatus
ENSTNIG00000002660	rpusd1	99	67.586	ENSDARG00000060192	rpusd1	99	67.586	Danio_rerio
ENSTNIG00000002660	rpusd1	95	59.387	ENSDNOG00000003721	RPUSD1	98	53.311	Dasypus_novemcinctus
ENSTNIG00000002660	rpusd1	99	55.219	ENSDORG00000026656	Rpusd1	98	55.219	Dipodomys_ordii
ENSTNIG00000002660	rpusd1	93	50.186	ENSEBUG00000008767	rpusd1	79	51.341	Eptatretus_burgeri
ENSTNIG00000002660	rpusd1	92	62.055	ENSEASG00005018421	RPUSD1	61	62.055	Equus_asinus_asinus
ENSTNIG00000002660	rpusd1	99	66.007	ENSELUG00000014307	rpusd1	88	66.667	Esox_lucius
ENSTNIG00000002660	rpusd1	99	54.054	ENSFCAG00000010359	RPUSD1	98	54.054	Felis_catus
ENSTNIG00000002660	rpusd1	99	60.943	ENSFALG00000003211	RPUSD1	99	60.943	Ficedula_albicollis
ENSTNIG00000002660	rpusd1	99	54.000	ENSFDAG00000013398	RPUSD1	98	54.000	Fukomys_damarensis
ENSTNIG00000002660	rpusd1	99	69.079	ENSFHEG00000004736	rpusd1	99	69.079	Fundulus_heteroclitus
ENSTNIG00000002660	rpusd1	99	67.213	ENSGMOG00000010756	rpusd1	99	67.213	Gadus_morhua
ENSTNIG00000002660	rpusd1	99	59.667	ENSGALG00000005315	RPUSD1	99	59.667	Gallus_gallus
ENSTNIG00000002660	rpusd1	99	70.764	ENSGAFG00000009886	rpusd1	99	70.764	Gambusia_affinis
ENSTNIG00000002660	rpusd1	99	72.222	ENSGACG00000014276	rpusd1	99	72.222	Gasterosteus_aculeatus
ENSTNIG00000002660	rpusd1	99	57.000	ENSGAGG00000004181	RPUSD1	99	57.000	Gopherus_agassizii
ENSTNIG00000002660	rpusd1	99	53.268	ENSGGOG00000013997	RPUSD1	78	75.490	Gorilla_gorilla
ENSTNIG00000002660	rpusd1	99	71.104	ENSHBUG00000023728	rpusd1	99	71.753	Haplochromis_burtoni
ENSTNIG00000002660	rpusd1	99	54.000	ENSHGLG00000002595	RPUSD1	98	54.000	Heterocephalus_glaber_female
ENSTNIG00000002660	rpusd1	99	54.000	ENSHGLG00100014303	RPUSD1	98	54.000	Heterocephalus_glaber_male
ENSTNIG00000002660	rpusd1	99	76.056	ENSHCOG00000002390	rpusd1	99	76.056	Hippocampus_comes
ENSTNIG00000002660	rpusd1	99	61.538	ENSIPUG00000001570	rpusd1	99	61.873	Ictalurus_punctatus
ENSTNIG00000002660	rpusd1	99	55.333	ENSSTOG00000004276	RPUSD1	98	55.333	Ictidomys_tridecemlineatus
ENSTNIG00000002660	rpusd1	99	54.362	ENSJJAG00000015696	Rpusd1	98	54.362	Jaculus_jaculus
ENSTNIG00000002660	rpusd1	99	72.000	ENSKMAG00000017287	rpusd1	98	72.000	Kryptolebias_marmoratus
ENSTNIG00000002660	rpusd1	99	70.588	ENSLBEG00000022502	rpusd1	99	70.588	Labrus_bergylta
ENSTNIG00000002660	rpusd1	99	70.588	ENSLBEG00000013354	RPUSD1	99	70.588	Labrus_bergylta
ENSTNIG00000002660	rpusd1	99	57.383	ENSLACG00000008869	RPUSD1	99	57.383	Latimeria_chalumnae
ENSTNIG00000002660	rpusd1	79	78.972	ENSLOCG00000005682	rpusd1	94	78.922	Lepisosteus_oculatus
ENSTNIG00000002660	rpusd1	99	54.054	ENSLAFG00000002115	RPUSD1	98	54.054	Loxodonta_africana
ENSTNIG00000002660	rpusd1	99	53.595	ENSMFAG00000003961	RPUSD1	78	75.490	Macaca_fascicularis
ENSTNIG00000002660	rpusd1	99	53.595	ENSMMUG00000000842	RPUSD1	78	75.490	Macaca_mulatta
ENSTNIG00000002660	rpusd1	99	53.595	ENSMNEG00000042712	RPUSD1	78	75.490	Macaca_nemestrina
ENSTNIG00000002660	rpusd1	99	53.595	ENSMLEG00000030591	RPUSD1	78	75.490	Mandrillus_leucophaeus
ENSTNIG00000002660	rpusd1	99	72.638	ENSMAMG00000004735	rpusd1	99	72.638	Mastacembelus_armatus
ENSTNIG00000002660	rpusd1	99	70.779	ENSMZEG00005003214	rpusd1	99	71.429	Maylandia_zebra
ENSTNIG00000002660	rpusd1	97	59.864	ENSMGAG00000005447	RPUSD1	98	59.864	Meleagris_gallopavo
ENSTNIG00000002660	rpusd1	93	54.688	ENSMAUG00000019998	Rpusd1	98	54.688	Mesocricetus_auratus
ENSTNIG00000002660	rpusd1	99	53.667	ENSMICG00000017561	RPUSD1	78	75.490	Microcebus_murinus
ENSTNIG00000002660	rpusd1	99	54.333	ENSMOCG00000014082	Rpusd1	98	54.333	Microtus_ochrogaster
ENSTNIG00000002660	rpusd1	99	79.630	ENSMMOG00000012569	rpusd1	99	79.630	Mola_mola
ENSTNIG00000002660	rpusd1	99	57.807	ENSMODG00000016882	RPUSD1	98	57.616	Monodelphis_domestica
ENSTNIG00000002660	rpusd1	99	71.661	ENSMALG00000017818	rpusd1	99	71.987	Monopterus_albus
ENSTNIG00000002660	rpusd1	99	54.667	MGP_CAROLIEiJ_G0021244	Rpusd1	98	54.667	Mus_caroli
ENSTNIG00000002660	rpusd1	99	54.333	ENSMUSG00000041199	Rpusd1	98	54.333	Mus_musculus
ENSTNIG00000002660	rpusd1	99	53.642	MGP_PahariEiJ_G0023562	Rpusd1	98	53.642	Mus_pahari
ENSTNIG00000002660	rpusd1	99	54.333	MGP_SPRETEiJ_G0022155	Rpusd1	98	54.333	Mus_spretus
ENSTNIG00000002660	rpusd1	97	54.296	ENSMPUG00000015897	RPUSD1	96	54.296	Mustela_putorius_furo
ENSTNIG00000002660	rpusd1	97	59.774	ENSMLUG00000001089	RPUSD1	86	59.774	Myotis_lucifugus
ENSTNIG00000002660	rpusd1	99	54.333	ENSNGAG00000003595	Rpusd1	98	54.333	Nannospalax_galili
ENSTNIG00000002660	rpusd1	99	74.237	ENSNBRG00000006457	rpusd1	99	73.559	Neolamprologus_brichardi
ENSTNIG00000002660	rpusd1	99	58.503	ENSMEUG00000016049	RPUSD1	98	58.503	Notamacropus_eugenii
ENSTNIG00000002660	rpusd1	99	50.171	ENSOPRG00000008340	RPUSD1	98	50.171	Ochotona_princeps
ENSTNIG00000002660	rpusd1	92	61.265	ENSODEG00000016945	RPUSD1	83	61.265	Octodon_degus
ENSTNIG00000002660	rpusd1	96	80.843	ENSONIG00000015672	rpusd1	99	71.895	Oreochromis_niloticus
ENSTNIG00000002660	rpusd1	99	70.569	ENSORLG00000013009	rpusd1	98	70.569	Oryzias_latipes
ENSTNIG00000002660	rpusd1	99	70.234	ENSORLG00020010382	rpusd1	98	70.234	Oryzias_latipes_hni
ENSTNIG00000002660	rpusd1	99	69.565	ENSORLG00015021354	rpusd1	98	69.565	Oryzias_latipes_hsok
ENSTNIG00000002660	rpusd1	99	71.477	ENSOMEG00000021426	rpusd1	99	71.477	Oryzias_melastigma
ENSTNIG00000002660	rpusd1	99	52.941	ENSOGAG00000003795	RPUSD1	98	52.941	Otolemur_garnettii
ENSTNIG00000002660	rpusd1	99	56.623	ENSOARG00000014254	RPUSD1	98	56.623	Ovis_aries
ENSTNIG00000002660	rpusd1	99	52.941	ENSPPAG00000034797	RPUSD1	78	75.490	Pan_paniscus
ENSTNIG00000002660	rpusd1	99	54.054	ENSPPRG00000012389	RPUSD1	98	54.054	Panthera_pardus
ENSTNIG00000002660	rpusd1	99	54.054	ENSPTIG00000008545	RPUSD1	77	72.277	Panthera_tigris_altaica
ENSTNIG00000002660	rpusd1	99	52.941	ENSPTRG00000007565	RPUSD1	78	75.490	Pan_troglodytes
ENSTNIG00000002660	rpusd1	99	53.595	ENSPANG00000024401	RPUSD1	78	75.490	Papio_anubis
ENSTNIG00000002660	rpusd1	99	65.886	ENSPKIG00000018890	rpusd1	90	65.886	Paramormyrops_kingsleyae
ENSTNIG00000002660	rpusd1	99	59.000	ENSPSIG00000013945	RPUSD1	99	59.000	Pelodiscus_sinensis
ENSTNIG00000002660	rpusd1	99	71.626	ENSPMGG00000014950	rpusd1	99	71.626	Periophthalmus_magnuspinnatus
ENSTNIG00000002660	rpusd1	99	54.333	ENSPEMG00000000497	Rpusd1	98	54.333	Peromyscus_maniculatus_bairdii
ENSTNIG00000002660	rpusd1	93	60.870	ENSPMAG00000001563	rpusd1	83	60.870	Petromyzon_marinus
ENSTNIG00000002660	rpusd1	99	58.923	ENSPCIG00000021216	-	92	58.923	Phascolarctos_cinereus
ENSTNIG00000002660	rpusd1	99	72.000	ENSPFOG00000007946	rpusd1	99	72.000	Poecilia_formosa
ENSTNIG00000002660	rpusd1	99	72.000	ENSPLAG00000011925	rpusd1	99	72.000	Poecilia_latipinna
ENSTNIG00000002660	rpusd1	99	71.667	ENSPMEG00000002910	rpusd1	99	71.667	Poecilia_mexicana
ENSTNIG00000002660	rpusd1	99	71.429	ENSPREG00000019851	rpusd1	99	71.429	Poecilia_reticulata
ENSTNIG00000002660	rpusd1	99	41.017	ENSPCAG00000002258	RPUSD1	98	41.017	Procavia_capensis
ENSTNIG00000002660	rpusd1	99	52.614	ENSPCOG00000022582	RPUSD1	78	76.471	Propithecus_coquereli
ENSTNIG00000002660	rpusd1	99	49.673	ENSPVAG00000013104	RPUSD1	98	49.673	Pteropus_vampyrus
ENSTNIG00000002660	rpusd1	99	80.147	ENSPNYG00000024076	rpusd1	99	80.515	Pundamilia_nyererei
ENSTNIG00000002660	rpusd1	99	63.230	ENSPNAG00000013806	rpusd1	99	63.230	Pygocentrus_nattereri
ENSTNIG00000002660	rpusd1	99	54.333	ENSRNOG00000023639	Rpusd1	98	54.333	Rattus_norvegicus
ENSTNIG00000002660	rpusd1	99	53.922	ENSRBIG00000030238	RPUSD1	78	75.490	Rhinopithecus_bieti
ENSTNIG00000002660	rpusd1	99	53.922	ENSRROG00000036663	RPUSD1	78	75.490	Rhinopithecus_roxellana
ENSTNIG00000002660	rpusd1	99	54.730	ENSSBOG00000033063	RPUSD1	98	54.730	Saimiri_boliviensis_boliviensis
ENSTNIG00000002660	rpusd1	99	57.912	ENSSHAG00000013500	RPUSD1	98	57.912	Sarcophilus_harrisii
ENSTNIG00000002660	rpusd1	99	66.667	ENSSFOG00015014394	rpusd1	99	66.667	Scleropages_formosus
ENSTNIG00000002660	rpusd1	99	70.915	ENSSMAG00000008045	rpusd1	92	70.915	Scophthalmus_maximus
ENSTNIG00000002660	rpusd1	96	82.759	ENSSDUG00000001829	rpusd1	96	73.529	Seriola_dumerili
ENSTNIG00000002660	rpusd1	96	82.759	ENSSLDG00000020853	rpusd1	96	73.529	Seriola_lalandi_dorsalis
ENSTNIG00000002660	rpusd1	61	67.665	ENSSARG00000011187	-	95	68.354	Sorex_araneus
ENSTNIG00000002660	rpusd1	58	53.476	ENSSPUG00000005119	-	98	53.476	Sphenodon_punctatus
ENSTNIG00000002660	rpusd1	99	73.203	ENSSPAG00000012708	rpusd1	99	73.203	Stegastes_partitus
ENSTNIG00000002660	rpusd1	93	63.780	ENSSSCG00000008000	RPUSD1	98	63.780	Sus_scrofa
ENSTNIG00000002660	rpusd1	92	67.729	ENSTGUG00000015375	RPUSD1	99	67.729	Taeniopygia_guttata
ENSTNIG00000002660	rpusd1	99	75.817	ENSTRUG00000003041	rpusd1	98	75.817	Takifugu_rubripes
ENSTNIG00000002660	rpusd1	99	54.902	ENSTTRG00000010167	RPUSD1	98	54.902	Tursiops_truncatus
ENSTNIG00000002660	rpusd1	99	55.068	ENSUAMG00000012736	RPUSD1	98	55.068	Ursus_americanus
ENSTNIG00000002660	rpusd1	99	55.068	ENSUMAG00000021174	RPUSD1	98	55.068	Ursus_maritimus
ENSTNIG00000002660	rpusd1	99	55.405	ENSVVUG00000012357	RPUSD1	98	55.405	Vulpes_vulpes
ENSTNIG00000002660	rpusd1	99	59.122	ENSXETG00000007184	rpusd1	98	59.122	Xenopus_tropicalis
ENSTNIG00000002660	rpusd1	99	71.429	ENSXCOG00000017930	rpusd1	99	71.429	Xiphophorus_couchianus
ENSTNIG00000002660	rpusd1	99	71.761	ENSXMAG00000024084	rpusd1	99	71.761	Xiphophorus_maculatus