EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000002802 (Gene tree)
Gene ID: -
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7 nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 9529 bases
Position: chr15_random:35246-44774
Accession: ZDB-GENE-030131-9122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005364	EST1	PF10374.9	5.4e-25	1	1
ENSTNIP00000005364	EST1_DNA_bind	PF10373.9	5.3e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005782	-	2352	-	ENSTNIP00000005634	783 (aa)	-	H3CBL2
ENSTNIT00000005510	-	3465	-	ENSTNIP00000005364	1154 (aa)	-	H3CAU2

Gene Model

Click here to download ENSTNIG00000002802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002802's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002802	smg7	99	63.697	ENSG00000116698	SMG7	86	89.375	Homo_sapiens
ENSTNIG00000002802	smg7	83	78.095	ENSAPOG00000009611	smg7	94	78.550	Acanthochromis_polyacanthus
ENSTNIG00000002802	smg7	99	58.511	ENSAMEG00000002357	SMG7	100	60.884	Ailuropoda_melanoleuca
ENSTNIG00000002802	smg7	90	80.303	ENSACIG00000015152	smg7	99	74.324	Amphilophus_citrinellus
ENSTNIG00000002802	smg7	100	74.774	ENSAOCG00000013538	smg7	100	75.964	Amphiprion_ocellaris
ENSTNIG00000002802	smg7	100	74.631	ENSAPEG00000007851	smg7	100	75.820	Amphiprion_percula
ENSTNIG00000002802	smg7	100	71.499	ENSATEG00000006931	smg7	100	72.586	Anabas_testudineus
ENSTNIG00000002802	smg7	99	58.713	ENSAPLG00000015811	SMG7	99	58.891	Anas_platyrhynchos
ENSTNIG00000002802	smg7	99	59.660	ENSACAG00000014989	SMG7	99	60.065	Anolis_carolinensis
ENSTNIG00000002802	smg7	99	61.607	ENSANAG00000028114	SMG7	84	89.103	Aotus_nancymaae
ENSTNIG00000002802	smg7	100	74.465	ENSACLG00000022079	smg7	100	74.547	Astatotilapia_calliptera
ENSTNIG00000002802	smg7	100	68.317	ENSAMXG00000020809	smg7	100	69.073	Astyanax_mexicanus
ENSTNIG00000002802	smg7	99	63.291	ENSBTAG00000008003	SMG7	97	63.202	Bos_taurus
ENSTNIG00000002802	smg7	99	63.889	ENSCJAG00000005135	SMG7	85	89.103	Callithrix_jacchus
ENSTNIG00000002802	smg7	99	63.331	ENSCAFG00000013276	SMG7	97	63.705	Canis_familiaris
ENSTNIG00000002802	smg7	99	63.331	ENSCAFG00020015475	SMG7	89	85.455	Canis_lupus_dingo
ENSTNIG00000002802	smg7	100	63.238	ENSCHIG00000018192	SMG7	99	63.233	Capra_hircus
ENSTNIG00000002802	smg7	99	63.782	ENSTSYG00000002667	SMG7	80	89.103	Carlito_syrichta
ENSTNIG00000002802	smg7	99	63.331	ENSCPOG00000008906	SMG7	99	62.932	Cavia_porcellus
ENSTNIG00000002802	smg7	99	59.299	ENSCCAG00000028596	SMG7	84	89.103	Cebus_capucinus
ENSTNIG00000002802	smg7	99	63.613	ENSCATG00000011063	SMG7	84	89.103	Cercocebus_atys
ENSTNIG00000002802	smg7	99	64.111	ENSCLAG00000010751	SMG7	99	63.812	Chinchilla_lanigera
ENSTNIG00000002802	smg7	99	63.697	ENSCSAG00000012654	SMG7	97	63.735	Chlorocebus_sabaeus
ENSTNIG00000002802	smg7	86	61.271	ENSCHOG00000010522	SMG7	88	61.456	Choloepus_hoffmanni
ENSTNIG00000002802	smg7	99	61.985	ENSCPBG00000015724	SMG7	99	62.075	Chrysemys_picta_bellii
ENSTNIG00000002802	smg7	99	59.002	ENSCANG00000015680	SMG7	84	89.103	Colobus_angolensis_palliatus
ENSTNIG00000002802	smg7	99	63.038	ENSCGRG00001013705	Smg7	99	63.162	Cricetulus_griseus_chok1gshd
ENSTNIG00000002802	smg7	99	62.626	ENSCGRG00000018401	Smg7	99	62.752	Cricetulus_griseus_crigri
ENSTNIG00000002802	smg7	92	79.293	ENSCVAG00000011842	smg7	100	79.293	Cyprinodon_variegatus
ENSTNIG00000002802	smg7	100	67.951	ENSDARG00000060767	smg7	100	68.571	Danio_rerio
ENSTNIG00000002802	smg7	99	63.606	ENSDORG00000007331	Smg7	99	63.644	Dipodomys_ordii
ENSTNIG00000002802	smg7	96	63.249	ENSETEG00000002654	SMG7	99	63.085	Echinops_telfairi
ENSTNIG00000002802	smg7	99	64.497	ENSEASG00005006524	SMG7	99	64.238	Equus_asinus_asinus
ENSTNIG00000002802	smg7	94	82.081	ENSECAG00000004313	SMG7	97	81.609	Equus_caballus
ENSTNIG00000002802	smg7	96	62.554	ENSEEUG00000002024	SMG7	94	62.684	Erinaceus_europaeus
ENSTNIG00000002802	smg7	100	67.429	ENSELUG00000010293	smg7	100	67.779	Esox_lucius
ENSTNIG00000002802	smg7	99	63.997	ENSFCAG00000010900	SMG7	99	65.563	Felis_catus
ENSTNIG00000002802	smg7	99	59.457	ENSFALG00000003047	SMG7	100	59.852	Ficedula_albicollis
ENSTNIG00000002802	smg7	99	63.367	ENSFDAG00000012121	SMG7	99	63.189	Fukomys_damarensis
ENSTNIG00000002802	smg7	100	68.734	ENSFHEG00000011073	smg7	100	68.858	Fundulus_heteroclitus
ENSTNIG00000002802	smg7	97	60.192	ENSGMOG00000004916	smg7	100	60.192	Gadus_morhua
ENSTNIG00000002802	smg7	92	62.281	ENSGALG00000004667	SMG7	97	62.445	Gallus_gallus
ENSTNIG00000002802	smg7	100	69.130	ENSGAFG00000019000	smg7	100	69.540	Gambusia_affinis
ENSTNIG00000002802	smg7	98	75.919	ENSGACG00000001634	smg7	99	76.775	Gasterosteus_aculeatus
ENSTNIG00000002802	smg7	99	63.697	ENSGGOG00000002342	SMG7	82	86.957	Gorilla_gorilla
ENSTNIG00000002802	smg7	100	73.594	ENSHBUG00000003726	smg7	98	77.665	Haplochromis_burtoni
ENSTNIG00000002802	smg7	98	63.621	ENSHGLG00000009353	SMG7	100	63.698	Heterocephalus_glaber_female
ENSTNIG00000002802	smg7	99	58.263	ENSHGLG00100004878	-	99	58.179	Heterocephalus_glaber_male
ENSTNIG00000002802	smg7	98	62.222	ENSHGLG00100009637	-	100	62.309	Heterocephalus_glaber_male
ENSTNIG00000002802	smg7	100	68.096	ENSIPUG00000016997	smg7	97	73.604	Ictalurus_punctatus
ENSTNIG00000002802	smg7	99	63.990	ENSSTOG00000000401	SMG7	99	64.064	Ictidomys_tridecemlineatus
ENSTNIG00000002802	smg7	99	63.851	ENSJJAG00000012351	Smg7	99	63.926	Jaculus_jaculus
ENSTNIG00000002802	smg7	97	65.850	ENSKMAG00000004900	smg7	100	66.442	Kryptolebias_marmoratus
ENSTNIG00000002802	smg7	99	69.597	ENSLBEG00000002983	smg7	99	70.816	Labrus_bergylta
ENSTNIG00000002802	smg7	99	63.445	ENSLACG00000000972	SMG7	99	64.087	Latimeria_chalumnae
ENSTNIG00000002802	smg7	99	63.452	ENSLOCG00000002010	smg7	99	63.880	Lepisosteus_oculatus
ENSTNIG00000002802	smg7	99	64.129	ENSLAFG00000008186	SMG7	99	63.943	Loxodonta_africana
ENSTNIG00000002802	smg7	99	64.027	ENSMFAG00000031653	SMG7	84	89.103	Macaca_fascicularis
ENSTNIG00000002802	smg7	99	63.613	ENSMMUG00000018458	SMG7	97	63.652	Macaca_mulatta
ENSTNIG00000002802	smg7	99	59.135	ENSMNEG00000034798	SMG7	84	89.103	Macaca_nemestrina
ENSTNIG00000002802	smg7	99	63.613	ENSMLEG00000037170	SMG7	100	60.917	Mandrillus_leucophaeus
ENSTNIG00000002802	smg7	88	72.171	ENSMAMG00000018733	smg7	86	73.284	Mastacembelus_armatus
ENSTNIG00000002802	smg7	100	74.465	ENSMZEG00005015247	smg7	100	74.465	Maylandia_zebra
ENSTNIG00000002802	smg7	90	61.921	ENSMGAG00000001561	SMG7	99	58.503	Meleagris_gallopavo
ENSTNIG00000002802	smg7	99	63.207	ENSMAUG00000019484	Smg7	99	63.331	Mesocricetus_auratus
ENSTNIG00000002802	smg7	99	63.499	ENSMICG00000007145	SMG7	81	89.103	Microcebus_murinus
ENSTNIG00000002802	smg7	99	63.118	ENSMOCG00000020748	Smg7	99	63.034	Microtus_ochrogaster
ENSTNIG00000002802	smg7	99	69.307	ENSMMOG00000001524	smg7	99	70.380	Mola_mola
ENSTNIG00000002802	smg7	93	58.158	ENSMODG00000007139	SMG7	99	58.275	Monodelphis_domestica
ENSTNIG00000002802	smg7	96	79.397	ENSMALG00000000061	smg7	93	79.397	Monopterus_albus
ENSTNIG00000002802	smg7	99	63.835	MGP_CAROLIEiJ_G0014704	Smg7	99	63.751	Mus_caroli
ENSTNIG00000002802	smg7	99	63.291	ENSMUSG00000042772	Smg7	99	63.415	Mus_musculus
ENSTNIG00000002802	smg7	99	63.460	MGP_PahariEiJ_G0027940	Smg7	99	63.583	Mus_pahari
ENSTNIG00000002802	smg7	99	63.376	MGP_SPRETEiJ_G0015511	Smg7	99	63.499	Mus_spretus
ENSTNIG00000002802	smg7	98	63.225	ENSMPUG00000011732	SMG7	97	63.690	Mustela_putorius_furo
ENSTNIG00000002802	smg7	99	63.429	ENSMLUG00000015417	SMG7	99	63.636	Myotis_lucifugus
ENSTNIG00000002802	smg7	99	63.056	ENSNGAG00000009836	Smg7	99	63.224	Nannospalax_galili
ENSTNIG00000002802	smg7	91	78.283	ENSNBRG00000024343	smg7	97	77.778	Neolamprologus_brichardi
ENSTNIG00000002802	smg7	99	63.782	ENSNLEG00000018018	SMG7	100	61.083	Nomascus_leucogenys
ENSTNIG00000002802	smg7	72	100.000	ENSMEUG00000004681	SMG7	72	100.000	Notamacropus_eugenii
ENSTNIG00000002802	smg7	96	59.469	ENSOPRG00000013942	SMG7	96	59.386	Ochotona_princeps
ENSTNIG00000002802	smg7	99	63.835	ENSODEG00000010390	SMG7	99	63.873	Octodon_degus
ENSTNIG00000002802	smg7	100	71.417	ENSONIG00000000277	smg7	100	71.664	Oreochromis_niloticus
ENSTNIG00000002802	smg7	99	63.297	ENSOANG00000000994	SMG7	100	63.381	Ornithorhynchus_anatinus
ENSTNIG00000002802	smg7	99	61.017	ENSOCUG00000005887	SMG7	93	61.023	Oryctolagus_cuniculus
ENSTNIG00000002802	smg7	100	70.248	ENSORLG00000007314	smg7	100	71.263	Oryzias_latipes
ENSTNIG00000002802	smg7	93	77.889	ENSORLG00020015779	smg7	100	71.511	Oryzias_latipes_hni
ENSTNIG00000002802	smg7	99	72.131	ENSORLG00015012289	smg7	100	71.181	Oryzias_latipes_hsok
ENSTNIG00000002802	smg7	100	70.992	ENSOMEG00000002328	smg7	100	71.865	Oryzias_melastigma
ENSTNIG00000002802	smg7	96	62.489	ENSOGAG00000003107	SMG7	93	62.587	Otolemur_garnettii
ENSTNIG00000002802	smg7	99	63.291	ENSOARG00000001352	SMG7	100	61.026	Ovis_aries
ENSTNIG00000002802	smg7	99	59.299	ENSPPAG00000031619	SMG7	84	89.103	Pan_paniscus
ENSTNIG00000002802	smg7	99	63.583	ENSPPRG00000011222	SMG7	97	63.621	Panthera_pardus
ENSTNIG00000002802	smg7	97	62.815	ENSPTIG00000007242	SMG7	100	60.884	Panthera_tigris_altaica
ENSTNIG00000002802	smg7	96	63.304	ENSPTRG00000001764	SMG7	84	89.103	Pan_troglodytes
ENSTNIG00000002802	smg7	99	63.613	ENSPANG00000004520	SMG7	97	63.652	Papio_anubis
ENSTNIG00000002802	smg7	100	63.479	ENSPKIG00000007242	smg7	99	67.526	Paramormyrops_kingsleyae
ENSTNIG00000002802	smg7	99	64.860	ENSPSIG00000012201	SMG7	99	64.776	Pelodiscus_sinensis
ENSTNIG00000002802	smg7	55	55.024	ENSPMGG00000021833	smg7	97	53.810	Periophthalmus_magnuspinnatus
ENSTNIG00000002802	smg7	99	63.038	ENSPEMG00000011315	Smg7	99	63.162	Peromyscus_maniculatus_bairdii
ENSTNIG00000002802	smg7	99	61.808	ENSPCIG00000003786	SMG7	89	88.820	Phascolarctos_cinereus
ENSTNIG00000002802	smg7	100	72.570	ENSPFOG00000019219	smg7	100	72.727	Poecilia_formosa
ENSTNIG00000002802	smg7	100	68.900	ENSPLAG00000001446	smg7	100	69.262	Poecilia_latipinna
ENSTNIG00000002802	smg7	97	67.918	ENSPMEG00000005218	smg7	99	68.846	Poecilia_mexicana
ENSTNIG00000002802	smg7	87	68.920	ENSPREG00000019039	smg7	92	69.418	Poecilia_reticulata
ENSTNIG00000002802	smg7	99	59.299	ENSPPYG00000000427	SMG7	99	59.350	Pongo_abelii
ENSTNIG00000002802	smg7	89	69.165	ENSPCAG00000008360	SMG7	88	68.951	Procavia_capensis
ENSTNIG00000002802	smg7	99	63.667	ENSPCOG00000011996	SMG7	76	89.103	Propithecus_coquereli
ENSTNIG00000002802	smg7	91	59.743	ENSPVAG00000000851	SMG7	89	59.982	Pteropus_vampyrus
ENSTNIG00000002802	smg7	100	73.633	ENSPNYG00000007643	smg7	100	74.505	Pundamilia_nyererei
ENSTNIG00000002802	smg7	80	75.441	ENSPNAG00000011374	smg7	98	74.384	Pygocentrus_nattereri
ENSTNIG00000002802	smg7	99	63.797	ENSRNOG00000027962	Smg7	99	66.667	Rattus_norvegicus
ENSTNIG00000002802	smg7	99	63.613	ENSRBIG00000036316	SMG7	100	60.917	Rhinopithecus_bieti
ENSTNIG00000002802	smg7	99	64.027	ENSRROG00000035719	SMG7	99	64.064	Rhinopithecus_roxellana
ENSTNIG00000002802	smg7	99	64.219	ENSSBOG00000023454	SMG7	86	89.375	Saimiri_boliviensis_boliviensis
ENSTNIG00000002802	smg7	100	58.809	ENSSHAG00000013147	SMG7	99	59.317	Sarcophilus_harrisii
ENSTNIG00000002802	smg7	100	66.447	ENSSFOG00015017252	smg7	99	74.869	Scleropages_formosus
ENSTNIG00000002802	smg7	100	73.036	ENSSMAG00000006067	smg7	100	74.608	Scophthalmus_maximus
ENSTNIG00000002802	smg7	96	80.299	ENSSDUG00000017543	smg7	100	72.735	Seriola_dumerili
ENSTNIG00000002802	smg7	92	63.596	ENSSPUG00000002064	SMG7	97	63.596	Sphenodon_punctatus
ENSTNIG00000002802	smg7	95	75.342	ENSSPAG00000008733	smg7	99	65.289	Stegastes_partitus
ENSTNIG00000002802	smg7	99	64.195	ENSSSCG00000015558	SMG7	99	64.400	Sus_scrofa
ENSTNIG00000002802	smg7	99	58.742	ENSTGUG00000003928	SMG7	100	59.091	Taeniopygia_guttata
ENSTNIG00000002802	smg7	78	64.205	ENSTBEG00000003220	SMG7	75	64.205	Tupaia_belangeri
ENSTNIG00000002802	smg7	96	62.827	ENSTTRG00000014778	SMG7	94	63.043	Tursiops_truncatus
ENSTNIG00000002802	smg7	96	60.245	ENSUAMG00000017473	SMG7	100	60.836	Ursus_americanus
ENSTNIG00000002802	smg7	96	62.924	ENSUMAG00000016389	SMG7	100	63.400	Ursus_maritimus
ENSTNIG00000002802	smg7	99	63.659	ENSVVUG00000008976	SMG7	99	65.829	Vulpes_vulpes
ENSTNIG00000002802	smg7	99	54.919	ENSXETG00000012528	smg7	99	54.766	Xenopus_tropicalis
ENSTNIG00000002802	smg7	100	68.957	ENSXMAG00000007123	smg7	100	69.694	Xiphophorus_maculatus