EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000002833 (Gene tree)
Gene ID: -
Gene Symbol: fam83c
Alias: im:7149063
Full Name: family with sequence similarity 83%2C member C
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2370 bases
Position: chrUn_random:54629475-54631844
Accession: ZDB-GENE-120201-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005398	FAM83	PF07894.12	4.3e-109	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005544	-	1068	-	ENSTNIP00000005398	356 (aa)	-	H3CAX6

Gene Model

Click here to download ENSTNIG00000002833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002833's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000002833	fam83c	50	37.363	ENSTNIG00000011260	fam83fa	68	34.783
ENSTNIG00000002833	fam83c	76	41.343	ENSTNIG00000019077	FAM83A	90	41.135
ENSTNIG00000002833	fam83c	73	38.636	ENSTNIG00000013100	-	91	38.636
ENSTNIG00000002833	fam83c	73	38.636	ENSTNIG00000007315	fam83d	97	38.636
ENSTNIG00000002833	fam83c	73	37.643	ENSTNIG00000003270	-	93	37.643
ENSTNIG00000002833	fam83c	66	34.177	ENSTNIG00000011604	-	92	34.177
ENSTNIG00000002833	fam83c	64	33.051	ENSTNIG00000014784	-	89	33.051
ENSTNIG00000002833	fam83c	88	33.645	ENSTNIG00000018819	fam83fb	78	33.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002833	fam83c	68	89.474	ENSAPOG00000006736	fam83c	64	89.474	Acanthochromis_polyacanthus
ENSTNIG00000002833	fam83c	100	78.630	ENSACIG00000015685	fam83c	61	79.224	Amphilophus_citrinellus
ENSTNIG00000002833	fam83c	100	82.432	ENSAPEG00000023028	fam83c	67	82.162	Amphiprion_percula
ENSTNIG00000002833	fam83c	99	80.217	ENSATEG00000008410	fam83c	61	79.675	Anabas_testudineus
ENSTNIG00000002833	fam83c	81	52.318	ENSAPLG00000007684	FAM83C	58	52.318	Anas_platyrhynchos
ENSTNIG00000002833	fam83c	83	54.276	ENSACAG00000005517	FAM83C	82	54.276	Anolis_carolinensis
ENSTNIG00000002833	fam83c	99	80.609	ENSACLG00000013293	fam83c	62	80.886	Astatotilapia_calliptera
ENSTNIG00000002833	fam83c	98	76.257	ENSAMXG00000018399	fam83c	59	76.536	Astyanax_mexicanus
ENSTNIG00000002833	fam83c	99	78.723	ENSCSEG00000017826	fam83c	61	78.457	Cynoglossus_semilaevis
ENSTNIG00000002833	fam83c	99	76.966	ENSCVAG00000010589	fam83c	61	76.966	Cyprinodon_variegatus
ENSTNIG00000002833	fam83c	99	69.421	ENSDARG00000075296	fam83c	54	73.802	Danio_rerio
ENSTNIG00000002833	fam83c	99	76.567	ENSELUG00000014439	fam83c	62	76.567	Esox_lucius
ENSTNIG00000002833	fam83c	82	52.459	ENSFALG00000012451	FAM83C	75	52.459	Ficedula_albicollis
ENSTNIG00000002833	fam83c	99	75.346	ENSFHEG00000017527	fam83c	62	74.792	Fundulus_heteroclitus
ENSTNIG00000002833	fam83c	84	74.754	ENSGMOG00000003558	fam83c	88	74.754	Gadus_morhua
ENSTNIG00000002833	fam83c	88	67.290	ENSGACG00000000006	fam83c	90	67.601	Gasterosteus_aculeatus
ENSTNIG00000002833	fam83c	82	54.934	ENSGAGG00000011761	FAM83C	63	54.636	Gopherus_agassizii
ENSTNIG00000002833	fam83c	99	80.609	ENSHBUG00000009655	fam83c	62	80.886	Haplochromis_burtoni
ENSTNIG00000002833	fam83c	99	66.154	ENSHCOG00000014079	fam83c	57	67.179	Hippocampus_comes
ENSTNIG00000002833	fam83c	98	70.670	ENSIPUG00000002046	FAM83C	62	71.067	Ictalurus_punctatus
ENSTNIG00000002833	fam83c	99	80.645	ENSKMAG00000015504	fam83c	61	80.376	Kryptolebias_marmoratus
ENSTNIG00000002833	fam83c	99	81.994	ENSLBEG00000017799	fam83c	62	81.994	Labrus_bergylta
ENSTNIG00000002833	fam83c	88	59.938	ENSLACG00000005534	FAM83C	59	61.812	Latimeria_chalumnae
ENSTNIG00000002833	fam83c	99	68.120	ENSLOCG00000007724	fam83c	51	75.000	Lepisosteus_oculatus
ENSTNIG00000002833	fam83c	100	77.926	ENSMAMG00000010316	fam83c	62	77.660	Mastacembelus_armatus
ENSTNIG00000002833	fam83c	99	80.609	ENSMZEG00005009063	fam83c	62	80.886	Maylandia_zebra
ENSTNIG00000002833	fam83c	82	52.649	ENSMGAG00000001956	FAM83C	58	52.649	Meleagris_gallopavo
ENSTNIG00000002833	fam83c	99	78.723	ENSMALG00000020114	fam83c	62	78.457	Monopterus_albus
ENSTNIG00000002833	fam83c	82	55.000	ENSMLUG00000004473	FAM83C	61	52.978	Myotis_lucifugus
ENSTNIG00000002833	fam83c	99	79.614	ENSONIG00000018564	fam83c	71	79.614	Oreochromis_niloticus
ENSTNIG00000002833	fam83c	99	72.654	ENSORLG00000002950	fam83c	63	72.654	Oryzias_latipes
ENSTNIG00000002833	fam83c	99	72.654	ENSORLG00020001822	fam83c	63	72.654	Oryzias_latipes_hni
ENSTNIG00000002833	fam83c	99	72.995	ENSORLG00015019398	fam83c	63	72.995	Oryzias_latipes_hsok
ENSTNIG00000002833	fam83c	99	73.190	ENSOMEG00000003633	fam83c	63	73.190	Oryzias_melastigma
ENSTNIG00000002833	fam83c	99	70.914	ENSPKIG00000023250	fam83c	55	74.760	Paramormyrops_kingsleyae
ENSTNIG00000002833	fam83c	99	80.716	ENSPMGG00000003433	fam83c	65	80.495	Periophthalmus_magnuspinnatus
ENSTNIG00000002833	fam83c	99	79.282	ENSPFOG00000014676	fam83c	61	78.729	Poecilia_formosa
ENSTNIG00000002833	fam83c	99	77.568	ENSPLAG00000023095	fam83c	61	78.108	Poecilia_latipinna
ENSTNIG00000002833	fam83c	99	77.568	ENSPMEG00000012791	fam83c	61	78.108	Poecilia_mexicana
ENSTNIG00000002833	fam83c	99	79.718	ENSPREG00000021668	fam83c	64	79.494	Poecilia_reticulata
ENSTNIG00000002833	fam83c	99	71.191	ENSPNYG00000019386	fam83c	60	71.468	Pundamilia_nyererei
ENSTNIG00000002833	fam83c	99	72.162	ENSPNAG00000011432	fam83c	62	74.797	Pygocentrus_nattereri
ENSTNIG00000002833	fam83c	99	79.893	ENSSMAG00000005706	fam83c	61	79.625	Scophthalmus_maximus
ENSTNIG00000002833	fam83c	99	80.780	ENSSDUG00000017583	fam83c	66	80.556	Seriola_dumerili
ENSTNIG00000002833	fam83c	99	76.943	ENSSLDG00000011527	fam83c	62	76.943	Seriola_lalandi_dorsalis
ENSTNIG00000002833	fam83c	88	53.846	ENSSPUG00000012470	FAM83C	50	56.623	Sphenodon_punctatus
ENSTNIG00000002833	fam83c	100	80.319	ENSSPAG00000017752	fam83c	62	80.053	Stegastes_partitus
ENSTNIG00000002833	fam83c	84	55.519	ENSXETG00000019789	fam83c	78	55.814	Xenopus_tropicalis
ENSTNIG00000002833	fam83c	99	78.108	ENSXMAG00000023922	fam83c	61	78.108	Xiphophorus_maculatus