EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000002987 (Gene tree)
Gene ID: -
Gene Symbol: ddx27
Alias: cb843
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 6442 bases
Position: chrUn_random:55922529-55928970
Accession: ZDB-GENE-031001-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005556	ResIII	PF04851.15	4.7e-07	1	1
ENSTNIP00000003436	ResIII	PF04851.15	4.9e-07	1	1
ENSTNIP00000005556	DEAD	PF00270.29	4e-43	1	1
ENSTNIP00000003436	DEAD	PF00270.29	4.3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003076	-	2280	-	ENSTNIP00000003436	759 (aa)	-	H3C5B7
ENSTNIT00000005704	-	2319	-	ENSTNIP00000005556	773 (aa)	-	H3CBD4

Gene Model

Click here to download ENSTNIG00000002987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002987's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000002987	ddx27	50	30.118	ENSTNIG00000013593	ddx56	75	30.353
ENSTNIG00000002987	ddx27	57	36.303	ENSTNIG00000017834	ddx18	75	36.977
ENSTNIG00000002987	ddx27	50	31.662	ENSTNIG00000006865	-	96	31.662
ENSTNIG00000002987	ddx27	53	34.053	ENSTNIG00000010477	ddx10	55	33.111
ENSTNIG00000002987	ddx27	50	30.749	ENSTNIG00000019425	ddx20	50	30.749
ENSTNIG00000002987	ddx27	52	30.392	ENSTNIG00000009990	ddx52	67	30.392
ENSTNIG00000002987	ddx27	50	30.526	ENSTNIG00000002924	eif4a3	91	30.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002987	ddx27	100	68.394	ENSG00000124228	DDX27	99	72.202	Homo_sapiens
ENSTNIG00000002987	ddx27	99	80.784	ENSAPOG00000017645	ddx27	99	81.176	Acanthochromis_polyacanthus
ENSTNIG00000002987	ddx27	99	68.248	ENSAMEG00000013627	DDX27	98	68.523	Ailuropoda_melanoleuca
ENSTNIG00000002987	ddx27	87	90.345	ENSACIG00000014378	ddx27	98	90.189	Amphilophus_citrinellus
ENSTNIG00000002987	ddx27	100	81.283	ENSAOCG00000021035	ddx27	99	81.414	Amphiprion_ocellaris
ENSTNIG00000002987	ddx27	100	80.890	ENSAPEG00000022281	ddx27	99	81.283	Amphiprion_percula
ENSTNIG00000002987	ddx27	99	78.129	ENSATEG00000010093	ddx27	92	87.113	Anabas_testudineus
ENSTNIG00000002987	ddx27	94	66.397	ENSAPLG00000011377	DDX27	99	66.265	Anas_platyrhynchos
ENSTNIG00000002987	ddx27	100	68.482	ENSANAG00000036257	DDX27	99	69.001	Aotus_nancymaae
ENSTNIG00000002987	ddx27	99	81.159	ENSACLG00000014992	ddx27	99	81.447	Astatotilapia_calliptera
ENSTNIG00000002987	ddx27	100	68.564	ENSAMXG00000000911	ddx27	92	75.610	Astyanax_mexicanus
ENSTNIG00000002987	ddx27	100	68.264	ENSBTAG00000006671	DDX27	100	67.821	Bos_taurus
ENSTNIG00000002987	ddx27	94	44.037	WBGene00022148	ddx-27	97	44.561	Caenorhabditis_elegans
ENSTNIG00000002987	ddx27	100	68.742	ENSCJAG00000016135	DDX27	99	69.001	Callithrix_jacchus
ENSTNIG00000002987	ddx27	99	69.029	ENSCAFG00000011384	DDX27	100	67.771	Canis_familiaris
ENSTNIG00000002987	ddx27	99	69.120	ENSCAFG00020017143	DDX27	100	68.072	Canis_lupus_dingo
ENSTNIG00000002987	ddx27	100	68.346	ENSCHIG00000007753	DDX27	100	68.205	Capra_hircus
ENSTNIG00000002987	ddx27	100	67.448	ENSTSYG00000030362	DDX27	100	67.181	Carlito_syrichta
ENSTNIG00000002987	ddx27	96	69.553	ENSCAPG00000010800	DDX27	100	68.800	Cavia_aperea
ENSTNIG00000002987	ddx27	100	68.442	ENSCPOG00000002009	DDX27	100	67.990	Cavia_porcellus
ENSTNIG00000002987	ddx27	100	68.223	ENSCCAG00000029782	DDX27	97	68.742	Cebus_capucinus
ENSTNIG00000002987	ddx27	100	68.217	ENSCATG00000034832	DDX27	99	68.872	Cercocebus_atys
ENSTNIG00000002987	ddx27	100	68.005	ENSCLAG00000008075	DDX27	100	67.696	Chinchilla_lanigera
ENSTNIG00000002987	ddx27	100	68.742	ENSCSAG00000014996	DDX27	99	69.001	Chlorocebus_sabaeus
ENSTNIG00000002987	ddx27	100	66.013	ENSCPBG00000026800	DDX27	98	66.449	Chrysemys_picta_bellii
ENSTNIG00000002987	ddx27	72	60.545	ENSCING00000004235	-	99	51.687	Ciona_intestinalis
ENSTNIG00000002987	ddx27	65	60.366	ENSCSAVG00000006949	-	100	60.366	Ciona_savignyi
ENSTNIG00000002987	ddx27	100	64.258	ENSCANG00000038431	DDX27	97	64.721	Colobus_angolensis_palliatus
ENSTNIG00000002987	ddx27	99	68.857	ENSCGRG00001015330	Ddx27	97	68.750	Cricetulus_griseus_chok1gshd
ENSTNIG00000002987	ddx27	99	68.857	ENSCGRG00000008199	Ddx27	99	68.750	Cricetulus_griseus_crigri
ENSTNIG00000002987	ddx27	100	78.941	ENSCSEG00000020260	ddx27	99	79.140	Cynoglossus_semilaevis
ENSTNIG00000002987	ddx27	99	79.605	ENSCVAG00000011736	ddx27	99	79.868	Cyprinodon_variegatus
ENSTNIG00000002987	ddx27	99	67.710	ENSDARG00000091831	ddx27	100	69.615	Danio_rerio
ENSTNIG00000002987	ddx27	100	68.264	ENSDNOG00000019453	DDX27	96	68.353	Dasypus_novemcinctus
ENSTNIG00000002987	ddx27	99	69.634	ENSDORG00000014137	Ddx27	100	67.807	Dipodomys_ordii
ENSTNIG00000002987	ddx27	95	47.619	FBgn0021995	Rs1	92	47.917	Drosophila_melanogaster
ENSTNIG00000002987	ddx27	90	56.753	ENSETEG00000018239	DDX27	96	53.093	Echinops_telfairi
ENSTNIG00000002987	ddx27	75	70.826	ENSEBUG00000004326	ddx27	93	68.833	Eptatretus_burgeri
ENSTNIG00000002987	ddx27	100	69.010	ENSEASG00005023342	DDX27	99	69.010	Equus_asinus_asinus
ENSTNIG00000002987	ddx27	100	68.831	ENSECAG00000020963	DDX27	99	68.880	Equus_caballus
ENSTNIG00000002987	ddx27	72	69.860	ENSEEUG00000012076	DDX27	70	70.259	Erinaceus_europaeus
ENSTNIG00000002987	ddx27	98	71.503	ENSELUG00000014535	ddx27	98	71.895	Esox_lucius
ENSTNIG00000002987	ddx27	100	68.229	ENSFCAG00000001448	DDX27	99	68.620	Felis_catus
ENSTNIG00000002987	ddx27	94	67.129	ENSFALG00000004884	DDX27	98	67.263	Ficedula_albicollis
ENSTNIG00000002987	ddx27	100	68.380	ENSFDAG00000018681	DDX27	100	67.738	Fukomys_damarensis
ENSTNIG00000002987	ddx27	73	88.869	ENSFHEG00000006419	ddx27	85	92.053	Fundulus_heteroclitus
ENSTNIG00000002987	ddx27	74	69.740	ENSGMOG00000016662	ddx27	76	77.285	Gadus_morhua
ENSTNIG00000002987	ddx27	100	65.576	ENSGALG00000006974	DDX27	100	65.045	Gallus_gallus
ENSTNIG00000002987	ddx27	95	79.724	ENSGAFG00000020344	ddx27	96	80.276	Gambusia_affinis
ENSTNIG00000002987	ddx27	99	79.058	ENSGACG00000003177	ddx27	100	77.792	Gasterosteus_aculeatus
ENSTNIG00000002987	ddx27	100	65.535	ENSGAGG00000001296	DDX27	100	65.666	Gopherus_agassizii
ENSTNIG00000002987	ddx27	78	74.007	ENSGGOG00000015474	-	97	73.625	Gorilla_gorilla
ENSTNIG00000002987	ddx27	99	81.291	ENSHBUG00000008119	ddx27	100	81.579	Haplochromis_burtoni
ENSTNIG00000002987	ddx27	100	68.346	ENSHGLG00000008388	DDX27	99	68.605	Heterocephalus_glaber_female
ENSTNIG00000002987	ddx27	100	68.346	ENSHGLG00100000130	DDX27	99	68.605	Heterocephalus_glaber_male
ENSTNIG00000002987	ddx27	100	68.542	ENSIPUG00000024627	ddx27	100	68.414	Ictalurus_punctatus
ENSTNIG00000002987	ddx27	99	66.883	ENSSTOG00000003645	DDX27	100	66.667	Ictidomys_tridecemlineatus
ENSTNIG00000002987	ddx27	100	62.565	ENSJJAG00000009056	Ddx27	100	62.435	Jaculus_jaculus
ENSTNIG00000002987	ddx27	99	82.199	ENSKMAG00000014889	ddx27	100	82.523	Kryptolebias_marmoratus
ENSTNIG00000002987	ddx27	83	89.046	ENSLBEG00000022589	ddx27	92	86.532	Labrus_bergylta
ENSTNIG00000002987	ddx27	100	66.624	ENSLACG00000011592	DDX27	100	66.117	Latimeria_chalumnae
ENSTNIG00000002987	ddx27	99	71.206	ENSLOCG00000002659	ddx27	99	71.429	Lepisosteus_oculatus
ENSTNIG00000002987	ddx27	100	68.620	ENSLAFG00000012190	DDX27	99	68.880	Loxodonta_africana
ENSTNIG00000002987	ddx27	100	68.701	ENSMFAG00000045749	DDX27	100	68.252	Macaca_fascicularis
ENSTNIG00000002987	ddx27	100	68.701	ENSMMUG00000023621	DDX27	100	68.123	Macaca_mulatta
ENSTNIG00000002987	ddx27	100	68.701	ENSMNEG00000043931	DDX27	100	68.123	Macaca_nemestrina
ENSTNIG00000002987	ddx27	100	66.150	ENSMLEG00000028160	DDX27	97	66.796	Mandrillus_leucophaeus
ENSTNIG00000002987	ddx27	99	81.217	ENSMAMG00000009174	ddx27	95	87.874	Mastacembelus_armatus
ENSTNIG00000002987	ddx27	99	81.291	ENSMZEG00005008750	ddx27	99	81.579	Maylandia_zebra
ENSTNIG00000002987	ddx27	90	69.798	ENSMGAG00000008727	DDX27	99	68.143	Meleagris_gallopavo
ENSTNIG00000002987	ddx27	99	69.038	ENSMAUG00000000552	Ddx27	99	68.668	Mesocricetus_auratus
ENSTNIG00000002987	ddx27	100	67.834	ENSMICG00000002005	DDX27	100	67.092	Microcebus_murinus
ENSTNIG00000002987	ddx27	99	69.261	ENSMOCG00000019594	Ddx27	99	69.020	Microtus_ochrogaster
ENSTNIG00000002987	ddx27	98	79.608	ENSMMOG00000012754	ddx27	89	89.786	Mola_mola
ENSTNIG00000002987	ddx27	100	66.928	ENSMODG00000016285	DDX27	99	67.185	Monodelphis_domestica
ENSTNIG00000002987	ddx27	98	81.952	ENSMALG00000020942	ddx27	100	79.783	Monopterus_albus
ENSTNIG00000002987	ddx27	99	68.609	MGP_CAROLIEiJ_G0024700	Ddx27	99	68.758	Mus_caroli
ENSTNIG00000002987	ddx27	99	68.609	ENSMUSG00000017999	Ddx27	99	68.758	Mus_musculus
ENSTNIG00000002987	ddx27	99	68.477	MGP_PahariEiJ_G0026142	Ddx27	99	68.497	Mus_pahari
ENSTNIG00000002987	ddx27	99	68.477	MGP_SPRETEiJ_G0025620	Ddx27	100	70.437	Mus_spretus
ENSTNIG00000002987	ddx27	100	67.010	ENSMPUG00000017572	DDX27	99	67.268	Mustela_putorius_furo
ENSTNIG00000002987	ddx27	100	67.834	ENSMLUG00000003186	DDX27	99	68.223	Myotis_lucifugus
ENSTNIG00000002987	ddx27	100	68.612	ENSNGAG00000023115	Ddx27	100	68.742	Nannospalax_galili
ENSTNIG00000002987	ddx27	90	63.386	ENSNLEG00000006961	DDX27	96	55.141	Nomascus_leucogenys
ENSTNIG00000002987	ddx27	100	64.230	ENSMEUG00000014412	DDX27	98	64.230	Notamacropus_eugenii
ENSTNIG00000002987	ddx27	100	67.358	ENSOPRG00000014589	DDX27	99	66.838	Ochotona_princeps
ENSTNIG00000002987	ddx27	99	69.170	ENSODEG00000006281	DDX27	99	68.961	Octodon_degus
ENSTNIG00000002987	ddx27	99	81.555	ENSONIG00000019473	ddx27	99	81.555	Oreochromis_niloticus
ENSTNIG00000002987	ddx27	98	66.048	ENSOANG00000006395	DDX27	97	65.755	Ornithorhynchus_anatinus
ENSTNIG00000002987	ddx27	99	65.459	ENSOCUG00000016108	DDX27	96	65.718	Oryctolagus_cuniculus
ENSTNIG00000002987	ddx27	100	80.103	ENSORLG00000013059	ddx27	100	80.438	Oryzias_latipes
ENSTNIG00000002987	ddx27	100	80.990	ENSORLG00020021215	ddx27	100	80.983	Oryzias_latipes_hni
ENSTNIG00000002987	ddx27	100	80.859	ENSORLG00015017588	ddx27	100	81.193	Oryzias_latipes_hsok
ENSTNIG00000002987	ddx27	99	81.974	ENSOMEG00000023896	ddx27	99	82.283	Oryzias_melastigma
ENSTNIG00000002987	ddx27	100	67.779	ENSOGAG00000002130	DDX27	100	67.474	Otolemur_garnettii
ENSTNIG00000002987	ddx27	92	70.323	ENSOARG00000012345	DDX27	100	69.722	Ovis_aries
ENSTNIG00000002987	ddx27	100	65.370	ENSPPAG00000035843	DDX27	94	70.954	Pan_paniscus
ENSTNIG00000002987	ddx27	100	68.318	ENSPPRG00000006728	DDX27	99	68.709	Panthera_pardus
ENSTNIG00000002987	ddx27	100	68.318	ENSPTIG00000011662	DDX27	99	68.709	Panthera_tigris_altaica
ENSTNIG00000002987	ddx27	100	68.394	ENSPTRG00000013602	DDX27	100	66.879	Pan_troglodytes
ENSTNIG00000002987	ddx27	100	62.824	ENSPANG00000000820	DDX27	99	63.083	Papio_anubis
ENSTNIG00000002987	ddx27	92	77.236	ENSPKIG00000002802	ddx27	100	68.655	Paramormyrops_kingsleyae
ENSTNIG00000002987	ddx27	90	67.826	ENSPSIG00000014493	DDX27	91	72.276	Pelodiscus_sinensis
ENSTNIG00000002987	ddx27	99	71.916	ENSPMGG00000013002	ddx27	100	71.875	Periophthalmus_magnuspinnatus
ENSTNIG00000002987	ddx27	99	68.997	ENSPEMG00000023215	Ddx27	99	68.627	Peromyscus_maniculatus_bairdii
ENSTNIG00000002987	ddx27	99	59.254	ENSPMAG00000003094	ddx27	96	60.563	Petromyzon_marinus
ENSTNIG00000002987	ddx27	77	75.424	ENSPCIG00000008052	DDX27	98	75.424	Phascolarctos_cinereus
ENSTNIG00000002987	ddx27	96	82.904	ENSPFOG00000012217	ddx27	100	82.904	Poecilia_formosa
ENSTNIG00000002987	ddx27	99	81.770	ENSPLAG00000005431	ddx27	99	81.770	Poecilia_latipinna
ENSTNIG00000002987	ddx27	68	89.494	ENSPMEG00000005563	ddx27	99	89.494	Poecilia_mexicana
ENSTNIG00000002987	ddx27	100	67.834	ENSPPYG00000011113	DDX27	99	68.653	Pongo_abelii
ENSTNIG00000002987	ddx27	100	67.917	ENSPCOG00000025327	DDX27	97	67.662	Propithecus_coquereli
ENSTNIG00000002987	ddx27	100	68.005	ENSPVAG00000006308	DDX27	97	68.182	Pteropus_vampyrus
ENSTNIG00000002987	ddx27	83	82.334	ENSPNYG00000014670	ddx27	98	82.677	Pundamilia_nyererei
ENSTNIG00000002987	ddx27	100	68.678	ENSPNAG00000016043	ddx27	100	68.638	Pygocentrus_nattereri
ENSTNIG00000002987	ddx27	99	69.404	ENSRNOG00000008081	Ddx27	99	69.412	Rattus_norvegicus
ENSTNIG00000002987	ddx27	100	65.941	ENSRBIG00000024112	DDX27	98	65.982	Rhinopithecus_bieti
ENSTNIG00000002987	ddx27	100	68.346	ENSRROG00000024811	DDX27	99	69.001	Rhinopithecus_roxellana
ENSTNIG00000002987	ddx27	59	45.238	YLL008W	-	68	43.023	Saccharomyces_cerevisiae
ENSTNIG00000002987	ddx27	100	68.387	ENSSBOG00000034281	DDX27	99	69.041	Saimiri_boliviensis_boliviensis
ENSTNIG00000002987	ddx27	100	78.655	ENSSMAG00000006972	ddx27	99	79.400	Scophthalmus_maximus
ENSTNIG00000002987	ddx27	100	80.258	ENSSDUG00000018855	ddx27	95	80.516	Seriola_dumerili
ENSTNIG00000002987	ddx27	100	77.893	ENSSLDG00000004114	ddx27	91	88.562	Seriola_lalandi_dorsalis
ENSTNIG00000002987	ddx27	83	70.866	ENSSPUG00000015687	DDX27	92	72.026	Sphenodon_punctatus
ENSTNIG00000002987	ddx27	86	89.184	ENSSPAG00000007670	ddx27	100	79.104	Stegastes_partitus
ENSTNIG00000002987	ddx27	100	67.908	ENSSSCG00000022915	DDX27	100	67.730	Sus_scrofa
ENSTNIG00000002987	ddx27	99	65.924	ENSTGUG00000005649	DDX27	100	66.053	Taeniopygia_guttata
ENSTNIG00000002987	ddx27	94	85.955	ENSTRUG00000002089	ddx27	99	85.955	Takifugu_rubripes
ENSTNIG00000002987	ddx27	100	61.619	ENSTBEG00000005320	DDX27	97	60.991	Tupaia_belangeri
ENSTNIG00000002987	ddx27	100	67.315	ENSTTRG00000004288	DDX27	97	66.836	Tursiops_truncatus
ENSTNIG00000002987	ddx27	84	69.892	ENSUAMG00000025519	DDX27	90	69.806	Ursus_americanus
ENSTNIG00000002987	ddx27	99	68.643	ENSUMAG00000024473	DDX27	100	67.821	Ursus_maritimus
ENSTNIG00000002987	ddx27	85	69.355	ENSVPAG00000001314	DDX27	86	69.355	Vicugna_pacos
ENSTNIG00000002987	ddx27	99	69.160	ENSVVUG00000022331	DDX27	99	69.091	Vulpes_vulpes
ENSTNIG00000002987	ddx27	99	66.097	ENSXETG00000017231	ddx27	99	66.623	Xenopus_tropicalis
ENSTNIG00000002987	ddx27	99	80.744	ENSXCOG00000017180	ddx27	100	81.349	Xiphophorus_couchianus
ENSTNIG00000002987	ddx27	99	82.252	ENSXMAG00000012284	ddx27	99	82.252	Xiphophorus_maculatus