EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000002991 (Gene tree)
Gene ID: -
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3217 bases
Position: chrUn_random:55951746-55954962
Accession: ZDB-GENE-040426-1819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005560	LSM	PF01423.22	4.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005708	-	900	-	ENSTNIP00000005560	238 (aa)	-	H3CBD8

Gene Model

Click here to download ENSTNIG00000002991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002991	snrpb	70	94.048	ENSG00000125835	SNRPB	74	98.077	Homo_sapiens
ENSTNIG00000002991	snrpb	100	98.750	ENSAPOG00000019606	snrpb	82	98.750	Acanthochromis_polyacanthus
ENSTNIG00000002991	snrpb	69	94.012	ENSAMEG00000011353	SNRPB	75	91.758	Ailuropoda_melanoleuca
ENSTNIG00000002991	snrpb	92	98.649	ENSACIG00000014480	snrpb	99	98.649	Amphilophus_citrinellus
ENSTNIG00000002991	snrpb	100	98.333	ENSAOCG00000006876	snrpb	100	98.333	Amphiprion_ocellaris
ENSTNIG00000002991	snrpb	100	98.333	ENSAPEG00000021585	snrpb	100	98.333	Amphiprion_percula
ENSTNIG00000002991	snrpb	100	97.917	ENSATEG00000009836	snrpb	100	97.917	Anabas_testudineus
ENSTNIG00000002991	snrpb	66	95.000	ENSACAG00000002053	SNRPB	75	91.954	Anolis_carolinensis
ENSTNIG00000002991	snrpb	70	94.048	ENSANAG00000024443	-	79	91.803	Aotus_nancymaae
ENSTNIG00000002991	snrpb	96	85.714	ENSANAG00000036271	-	74	84.699	Aotus_nancymaae
ENSTNIG00000002991	snrpb	100	98.750	ENSACLG00000014707	snrpb	100	98.750	Astatotilapia_calliptera
ENSTNIG00000002991	snrpb	99	98.305	ENSAMXG00000029434	snrpb	99	98.305	Astyanax_mexicanus
ENSTNIG00000002991	snrpb	91	81.448	ENSBTAG00000001038	SNRPB	79	91.803	Bos_taurus
ENSTNIG00000002991	snrpb	70	94.048	ENSCJAG00000020971	-	79	91.803	Callithrix_jacchus
ENSTNIG00000002991	snrpb	89	84.579	ENSCJAG00000023097	-	76	84.699	Callithrix_jacchus
ENSTNIG00000002991	snrpb	70	94.048	ENSCAFG00000006693	-	79	91.803	Canis_familiaris
ENSTNIG00000002991	snrpb	61	84.247	ENSCAFG00000031109	-	76	80.328	Canis_familiaris
ENSTNIG00000002991	snrpb	70	94.048	ENSCAFG00020016981	-	76	91.803	Canis_lupus_dingo
ENSTNIG00000002991	snrpb	70	94.048	ENSCHIG00000025449	-	79	91.803	Capra_hircus
ENSTNIG00000002991	snrpb	96	74.348	ENSTSYG00000032303	-	66	72.928	Carlito_syrichta
ENSTNIG00000002991	snrpb	70	94.048	ENSTSYG00000014498	-	79	91.803	Carlito_syrichta
ENSTNIG00000002991	snrpb	69	94.012	ENSCAPG00000012669	SNRPB	79	91.758	Cavia_aperea
ENSTNIG00000002991	snrpb	70	94.048	ENSCPOG00000039408	SNRPB	79	91.803	Cavia_porcellus
ENSTNIG00000002991	snrpb	70	94.048	ENSCCAG00000026002	SNRPB	79	91.803	Cebus_capucinus
ENSTNIG00000002991	snrpb	53	83.465	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSTNIG00000002991	snrpb	70	94.048	ENSCATG00000030230	SNRPB	79	91.803	Cercocebus_atys
ENSTNIG00000002991	snrpb	70	94.048	ENSCLAG00000012442	SNRPB	77	91.803	Chinchilla_lanigera
ENSTNIG00000002991	snrpb	70	94.048	ENSCSAG00000010840	SNRPB	79	91.803	Chlorocebus_sabaeus
ENSTNIG00000002991	snrpb	99	95.798	ENSCPBG00000026801	SNRPB	99	95.798	Chrysemys_picta_bellii
ENSTNIG00000002991	snrpb	70	94.048	ENSCANG00000019461	SNRPB	79	91.803	Colobus_angolensis_palliatus
ENSTNIG00000002991	snrpb	70	94.048	ENSCGRG00001023046	Snrpb	79	91.803	Cricetulus_griseus_chok1gshd
ENSTNIG00000002991	snrpb	68	93.865	ENSCGRG00000010423	Snrpb	78	91.429	Cricetulus_griseus_crigri
ENSTNIG00000002991	snrpb	100	98.739	ENSCSEG00000020328	snrpb	100	98.739	Cynoglossus_semilaevis
ENSTNIG00000002991	snrpb	100	97.490	ENSDARG00000011125	snrpb	100	97.490	Danio_rerio
ENSTNIG00000002991	snrpb	70	94.048	ENSDNOG00000015545	-	76	91.803	Dasypus_novemcinctus
ENSTNIG00000002991	snrpb	70	88.095	ENSDNOG00000007896	-	75	86.339	Dasypus_novemcinctus
ENSTNIG00000002991	snrpb	67	93.827	ENSDORG00000029558	Snrpb	77	91.525	Dipodomys_ordii
ENSTNIG00000002991	snrpb	77	62.437	FBgn0262601	SmB	73	69.388	Drosophila_melanogaster
ENSTNIG00000002991	snrpb	70	73.214	ENSETEG00000006830	SNRPB	80	72.678	Echinops_telfairi
ENSTNIG00000002991	snrpb	77	79.235	ENSEBUG00000007467	SNRPB	62	88.435	Eptatretus_burgeri
ENSTNIG00000002991	snrpb	70	93.452	ENSEASG00005012991	SNRPB	79	91.257	Equus_asinus_asinus
ENSTNIG00000002991	snrpb	70	94.048	ENSECAG00000011944	SNRPB	79	91.803	Equus_caballus
ENSTNIG00000002991	snrpb	70	94.048	ENSEEUG00000015568	SNRPB	64	91.803	Erinaceus_europaeus
ENSTNIG00000002991	snrpb	99	98.298	ENSELUG00000014564	snrpb	99	98.298	Esox_lucius
ENSTNIG00000002991	snrpb	70	94.048	ENSFCAG00000034090	-	79	91.803	Felis_catus
ENSTNIG00000002991	snrpb	95	95.217	ENSFALG00000004866	SNRPB	99	95.217	Ficedula_albicollis
ENSTNIG00000002991	snrpb	70	94.048	ENSFDAG00000009937	SNRPB	79	91.803	Fukomys_damarensis
ENSTNIG00000002991	snrpb	99	95.378	ENSGALG00000035421	SNRPN	99	95.378	Gallus_gallus
ENSTNIG00000002991	snrpb	94	96.903	ENSGAFG00000019558	snrpb	99	96.903	Gambusia_affinis
ENSTNIG00000002991	snrpb	100	98.739	ENSGACG00000003262	snrpb	100	98.739	Gasterosteus_aculeatus
ENSTNIG00000002991	snrpb	99	95.798	ENSGAGG00000001308	SNRPB	99	95.798	Gopherus_agassizii
ENSTNIG00000002991	snrpb	70	94.048	ENSGGOG00000016138	SNRPB	79	91.803	Gorilla_gorilla
ENSTNIG00000002991	snrpb	100	98.750	ENSHBUG00000008369	snrpb	100	98.750	Haplochromis_burtoni
ENSTNIG00000002991	snrpb	70	94.048	ENSHGLG00000016241	-	79	91.803	Heterocephalus_glaber_female
ENSTNIG00000002991	snrpb	63	86.000	ENSHGLG00000016505	-	86	81.667	Heterocephalus_glaber_female
ENSTNIG00000002991	snrpb	70	94.048	ENSHGLG00100012877	-	79	91.803	Heterocephalus_glaber_male
ENSTNIG00000002991	snrpb	63	86.000	ENSHGLG00100004178	-	86	81.667	Heterocephalus_glaber_male
ENSTNIG00000002991	snrpb	100	99.160	ENSHCOG00000014888	snrpb	100	99.160	Hippocampus_comes
ENSTNIG00000002991	snrpb	99	97.881	ENSIPUG00000024569	SNRPB	99	97.881	Ictalurus_punctatus
ENSTNIG00000002991	snrpb	70	92.262	ENSSTOG00000033664	-	76	90.164	Ictidomys_tridecemlineatus
ENSTNIG00000002991	snrpb	89	78.404	ENSSTOG00000027821	-	62	94.853	Ictidomys_tridecemlineatus
ENSTNIG00000002991	snrpb	70	94.048	ENSJJAG00000024170	Snrpb	79	91.803	Jaculus_jaculus
ENSTNIG00000002991	snrpb	95	97.368	ENSKMAG00000014494	snrpb	93	97.368	Kryptolebias_marmoratus
ENSTNIG00000002991	snrpb	100	99.580	ENSLBEG00000005678	snrpb	100	99.580	Labrus_bergylta
ENSTNIG00000002991	snrpb	99	94.958	ENSLACG00000011459	SNRPB	99	94.958	Latimeria_chalumnae
ENSTNIG00000002991	snrpb	99	98.305	ENSLOCG00000002687	snrpb	99	98.305	Lepisosteus_oculatus
ENSTNIG00000002991	snrpb	69	89.820	ENSLAFG00000017588	SNRPB	78	87.912	Loxodonta_africana
ENSTNIG00000002991	snrpb	70	94.048	ENSMFAG00000038756	SNRPB	79	91.803	Macaca_fascicularis
ENSTNIG00000002991	snrpb	70	94.048	ENSMMUG00000010050	SNRPB	79	91.803	Macaca_mulatta
ENSTNIG00000002991	snrpb	70	94.048	ENSMNEG00000027954	SNRPB	79	91.803	Macaca_nemestrina
ENSTNIG00000002991	snrpb	70	94.048	ENSMLEG00000022346	SNRPB	79	91.803	Mandrillus_leucophaeus
ENSTNIG00000002991	snrpb	99	98.745	ENSMAMG00000009294	snrpb	97	98.745	Mastacembelus_armatus
ENSTNIG00000002991	snrpb	100	98.750	ENSMZEG00005011856	snrpb	100	98.750	Maylandia_zebra
ENSTNIG00000002991	snrpb	75	83.425	ENSMICG00000015983	-	84	81.967	Microcebus_murinus
ENSTNIG00000002991	snrpb	70	94.048	ENSMICG00000016519	SNRPB	79	91.803	Microcebus_murinus
ENSTNIG00000002991	snrpb	58	78.417	ENSMOCG00000021362	-	76	74.586	Microtus_ochrogaster
ENSTNIG00000002991	snrpb	70	93.452	ENSMOCG00000002892	-	79	91.257	Microtus_ochrogaster
ENSTNIG00000002991	snrpb	95	99.556	ENSMMOG00000013226	snrpb	97	99.556	Mola_mola
ENSTNIG00000002991	snrpb	100	97.917	ENSMALG00000020839	snrpb	81	97.917	Monopterus_albus
ENSTNIG00000002991	snrpb	70	94.048	MGP_CAROLIEiJ_G0024293	Snrpb	74	98.077	Mus_caroli
ENSTNIG00000002991	snrpb	70	94.048	ENSMUSG00000027404	Snrpb	74	98.077	Mus_musculus
ENSTNIG00000002991	snrpb	70	94.048	MGP_PahariEiJ_G0025738	Snrpb	74	98.077	Mus_pahari
ENSTNIG00000002991	snrpb	70	94.048	MGP_SPRETEiJ_G0025213	Snrpb	73	98.077	Mus_spretus
ENSTNIG00000002991	snrpb	70	94.048	ENSMPUG00000009283	SNRPB	79	91.803	Mustela_putorius_furo
ENSTNIG00000002991	snrpb	92	87.783	ENSMLUG00000016951	SNRPB	77	88.770	Myotis_lucifugus
ENSTNIG00000002991	snrpb	70	94.048	ENSNGAG00000012051	Snrpb	79	91.803	Nannospalax_galili
ENSTNIG00000002991	snrpb	95	96.491	ENSNBRG00000006353	snrpb	87	96.491	Neolamprologus_brichardi
ENSTNIG00000002991	snrpb	70	94.048	ENSNLEG00000029067	SNRPB	77	91.758	Nomascus_leucogenys
ENSTNIG00000002991	snrpb	69	94.012	ENSMEUG00000015625	SNRPB	81	91.758	Notamacropus_eugenii
ENSTNIG00000002991	snrpb	70	94.048	ENSODEG00000004305	-	79	91.803	Octodon_degus
ENSTNIG00000002991	snrpb	70	88.690	ENSODEG00000016060	-	77	86.885	Octodon_degus
ENSTNIG00000002991	snrpb	100	98.750	ENSONIG00000000248	snrpb	100	98.750	Oreochromis_niloticus
ENSTNIG00000002991	snrpb	88	89.671	ENSOCUG00000028215	-	76	89.617	Oryctolagus_cuniculus
ENSTNIG00000002991	snrpb	70	94.048	ENSOCUG00000014042	-	76	91.803	Oryctolagus_cuniculus
ENSTNIG00000002991	snrpb	74	88.268	ENSOCUG00000022423	-	92	86.592	Oryctolagus_cuniculus
ENSTNIG00000002991	snrpb	88	65.094	ENSOCUG00000026813	-	78	63.889	Oryctolagus_cuniculus
ENSTNIG00000002991	snrpb	89	87.907	ENSOCUG00000021456	-	76	87.978	Oryctolagus_cuniculus
ENSTNIG00000002991	snrpb	100	97.917	ENSORLG00000021862	snrpb	100	97.917	Oryzias_latipes
ENSTNIG00000002991	snrpb	70	94.048	ENSOGAG00000016149	SNRPB	76	91.803	Otolemur_garnettii
ENSTNIG00000002991	snrpb	70	94.048	ENSOARG00000006740	SNRPB	79	91.803	Ovis_aries
ENSTNIG00000002991	snrpb	70	94.048	ENSPPAG00000036314	SNRPB	79	91.803	Pan_paniscus
ENSTNIG00000002991	snrpb	70	94.048	ENSPPRG00000003233	-	79	91.803	Panthera_pardus
ENSTNIG00000002991	snrpb	69	94.012	ENSPTIG00000007468	SNRPB	79	91.758	Panthera_tigris_altaica
ENSTNIG00000002991	snrpb	70	94.048	ENSPTRG00000013176	SNRPB	79	91.803	Pan_troglodytes
ENSTNIG00000002991	snrpb	70	94.048	ENSPANG00000020362	SNRPB	76	91.803	Papio_anubis
ENSTNIG00000002991	snrpb	99	97.034	ENSPKIG00000002865	snrpb	99	97.034	Paramormyrops_kingsleyae
ENSTNIG00000002991	snrpb	98	95.781	ENSPSIG00000014125	SNRPB	98	95.781	Pelodiscus_sinensis
ENSTNIG00000002991	snrpb	74	97.143	ENSPMGG00000016349	snrpb	75	97.143	Periophthalmus_magnuspinnatus
ENSTNIG00000002991	snrpb	70	94.048	ENSPEMG00000007948	Snrpb	79	91.803	Peromyscus_maniculatus_bairdii
ENSTNIG00000002991	snrpb	69	93.413	ENSPCIG00000004694	SNRPB	76	91.209	Phascolarctos_cinereus
ENSTNIG00000002991	snrpb	63	100.000	ENSPFOG00000011802	snrpb	62	100.000	Poecilia_formosa
ENSTNIG00000002991	snrpb	89	71.698	ENSPREG00000015515	snrpb	62	100.000	Poecilia_reticulata
ENSTNIG00000002991	snrpb	70	94.048	ENSPPYG00000010841	SNRPB	79	91.803	Pongo_abelii
ENSTNIG00000002991	snrpb	70	94.048	ENSPCOG00000013686	SNRPB	79	91.803	Propithecus_coquereli
ENSTNIG00000002991	snrpb	70	92.857	ENSPVAG00000017013	SNRPB	64	90.710	Pteropus_vampyrus
ENSTNIG00000002991	snrpb	100	98.750	ENSPNYG00000014788	snrpb	100	98.750	Pundamilia_nyererei
ENSTNIG00000002991	snrpb	99	97.881	ENSPNAG00000016126	snrpb	99	97.881	Pygocentrus_nattereri
ENSTNIG00000002991	snrpb	70	94.048	ENSRNOG00000006961	Snrpb	73	98.077	Rattus_norvegicus
ENSTNIG00000002991	snrpb	70	94.048	ENSRBIG00000040505	SNRPB	79	92.308	Rhinopithecus_bieti
ENSTNIG00000002991	snrpb	70	94.048	ENSRROG00000036094	SNRPB	79	91.803	Rhinopithecus_roxellana
ENSTNIG00000002991	snrpb	70	94.048	ENSSBOG00000027310	SNRPB	79	91.803	Saimiri_boliviensis_boliviensis
ENSTNIG00000002991	snrpb	99	94.958	ENSSHAG00000010394	SNRPB	99	94.958	Sarcophilus_harrisii
ENSTNIG00000002991	snrpb	99	96.610	ENSSFOG00015002870	snrpb	99	96.610	Scleropages_formosus
ENSTNIG00000002991	snrpb	100	99.580	ENSSMAG00000006766	snrpb	100	99.580	Scophthalmus_maximus
ENSTNIG00000002991	snrpb	100	98.750	ENSSDUG00000018539	snrpb	100	98.750	Seriola_dumerili
ENSTNIG00000002991	snrpb	100	98.750	ENSSLDG00000022391	snrpb	100	98.750	Seriola_lalandi_dorsalis
ENSTNIG00000002991	snrpb	69	78.443	ENSSARG00000003084	SNRPB	78	77.473	Sorex_araneus
ENSTNIG00000002991	snrpb	98	95.781	ENSSPUG00000015659	SNRPB	99	95.781	Sphenodon_punctatus
ENSTNIG00000002991	snrpb	100	98.750	ENSSPAG00000021992	snrpb	100	98.750	Stegastes_partitus
ENSTNIG00000002991	snrpb	70	94.048	ENSSSCG00000040857	-	79	91.803	Sus_scrofa
ENSTNIG00000002991	snrpb	95	72.926	ENSSSCG00000011966	-	77	69.399	Sus_scrofa
ENSTNIG00000002991	snrpb	59	97.143	ENSTGUG00000005684	SNRPB	59	97.143	Taeniopygia_guttata
ENSTNIG00000002991	snrpb	95	100.000	ENSTRUG00000023094	snrpb	99	100.000	Takifugu_rubripes
ENSTNIG00000002991	snrpb	70	94.048	ENSUAMG00000005984	-	88	91.803	Ursus_americanus
ENSTNIG00000002991	snrpb	90	78.037	ENSUMAG00000002123	-	63	94.891	Ursus_maritimus
ENSTNIG00000002991	snrpb	70	93.452	ENSVVUG00000025654	-	76	91.257	Vulpes_vulpes
ENSTNIG00000002991	snrpb	93	74.890	ENSVVUG00000010086	-	78	74.176	Vulpes_vulpes
ENSTNIG00000002991	snrpb	63	98.000	ENSXETG00000027266	snrpb	77	92.350	Xenopus_tropicalis
ENSTNIG00000002991	snrpb	71	82.456	ENSXMAG00000028767	snrpb	58	100.000	Xiphophorus_maculatus