EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000002994 (Gene tree)
Gene ID: -
Gene Symbol: polr2j
Alias: rpb11|zgc:110005
Full Name: polymerase (RNA) II (DNA directed) polypeptide J
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1320 bases
Position: chrUn_random:55959554-55960873
Accession: ZDB-GENE-050522-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005563	RNA_pol_L_2	PF13656.6	6.9e-30	1	1
ENSTNIP00000005563	RNA_pol_L	PF01193.24	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005711	-	570	-	ENSTNIP00000005563	117 (aa)	-	Q4TAB3

Gene Model

Click here to download ENSTNIG00000002994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000002994's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000002994	polr2j	100	94.872	ENSG00000005075	POLR2J	100	94.872	Homo_sapiens
ENSTNIG00000002994	polr2j	91	92.523	ENSG00000228049	POLR2J2	94	89.908	Homo_sapiens
ENSTNIG00000002994	polr2j	100	98.291	ENSAPOG00000019538	polr2j	100	98.291	Acanthochromis_polyacanthus
ENSTNIG00000002994	polr2j	100	87.402	ENSAMEG00000015480	-	100	87.402	Ailuropoda_melanoleuca
ENSTNIG00000002994	polr2j	93	75.455	ENSACIG00000014549	POLR2J2	91	75.455	Amphilophus_citrinellus
ENSTNIG00000002994	polr2j	100	97.436	ENSAOCG00000006937	polr2j	100	97.436	Amphiprion_ocellaris
ENSTNIG00000002994	polr2j	100	98.291	ENSAPEG00000021761	polr2j	100	98.291	Amphiprion_percula
ENSTNIG00000002994	polr2j	100	98.291	ENSATEG00000009731	polr2j	100	98.291	Anabas_testudineus
ENSTNIG00000002994	polr2j	100	98.291	ENSATEG00000013312	-	100	98.291	Anabas_testudineus
ENSTNIG00000002994	polr2j	86	92.079	ENSAPLG00000003744	-	100	92.079	Anas_platyrhynchos
ENSTNIG00000002994	polr2j	100	87.179	ENSACAG00000000251	POLR2J	100	87.179	Anolis_carolinensis
ENSTNIG00000002994	polr2j	100	98.291	ENSACLG00000014564	polr2j	100	98.291	Astatotilapia_calliptera
ENSTNIG00000002994	polr2j	100	96.581	ENSAMXG00000007517	polr2j	100	96.581	Astyanax_mexicanus
ENSTNIG00000002994	polr2j	62	63.014	ENSBTAG00000048046	-	61	63.014	Bos_taurus
ENSTNIG00000002994	polr2j	94	67.273	WBGene00012187	rpb-11	89	67.273	Caenorhabditis_elegans
ENSTNIG00000002994	polr2j	100	94.872	ENSCJAG00000016203	-	100	94.872	Callithrix_jacchus
ENSTNIG00000002994	polr2j	100	94.872	ENSCAFG00000013683	-	100	94.872	Canis_familiaris
ENSTNIG00000002994	polr2j	85	93.939	ENSTSYG00000029243	-	85	93.939	Carlito_syrichta
ENSTNIG00000002994	polr2j	100	94.872	ENSCPOG00000001401	-	100	94.872	Cavia_porcellus
ENSTNIG00000002994	polr2j	100	72.650	ENSCATG00000016595	-	96	83.516	Cercocebus_atys
ENSTNIG00000002994	polr2j	100	94.872	ENSCLAG00000005238	-	100	94.872	Chinchilla_lanigera
ENSTNIG00000002994	polr2j	100	94.872	ENSCSAG00000018092	-	100	94.872	Chlorocebus_sabaeus
ENSTNIG00000002994	polr2j	100	81.197	ENSCING00000020531	-	100	81.197	Ciona_intestinalis
ENSTNIG00000002994	polr2j	100	79.487	ENSCSAVG00000006948	-	100	79.487	Ciona_savignyi
ENSTNIG00000002994	polr2j	100	94.872	ENSCGRG00001012814	Polr2j	100	94.872	Cricetulus_griseus_chok1gshd
ENSTNIG00000002994	polr2j	100	80.342	ENSCGRG00000008433	Polr2j	100	80.342	Cricetulus_griseus_crigri
ENSTNIG00000002994	polr2j	100	95.726	ENSCSEG00000020352	polr2j	100	95.726	Cynoglossus_semilaevis
ENSTNIG00000002994	polr2j	100	97.436	ENSCVAG00000014267	polr2j	100	97.436	Cyprinodon_variegatus
ENSTNIG00000002994	polr2j	100	95.726	ENSDARG00000035146	polr2j	100	95.726	Danio_rerio
ENSTNIG00000002994	polr2j	100	94.872	ENSDORG00000005934	Polr2j	100	94.872	Dipodomys_ordii
ENSTNIG00000002994	polr2j	98	78.261	FBgn0032634	Rpb11	98	78.261	Drosophila_melanogaster
ENSTNIG00000002994	polr2j	100	64.103	ENSEBUG00000016100	polr2j	100	64.103	Eptatretus_burgeri
ENSTNIG00000002994	polr2j	100	94.872	ENSEASG00005016864	-	100	94.872	Equus_asinus_asinus
ENSTNIG00000002994	polr2j	100	96.581	ENSELUG00000012822	polr2j	100	96.581	Esox_lucius
ENSTNIG00000002994	polr2j	100	94.872	ENSFCAG00000000377	-	100	94.872	Felis_catus
ENSTNIG00000002994	polr2j	100	94.872	ENSFALG00000009523	POLR2J	100	94.872	Ficedula_albicollis
ENSTNIG00000002994	polr2j	100	94.872	ENSFDAG00000010507	-	100	94.872	Fukomys_damarensis
ENSTNIG00000002994	polr2j	100	98.291	ENSFHEG00000006625	polr2j	100	98.291	Fundulus_heteroclitus
ENSTNIG00000002994	polr2j	100	96.581	ENSGMOG00000018207	polr2j	100	96.581	Gadus_morhua
ENSTNIG00000002994	polr2j	100	94.872	ENSGALG00000030808	-	100	94.872	Gallus_gallus
ENSTNIG00000002994	polr2j	100	98.291	ENSGAFG00000019555	polr2j	100	98.291	Gambusia_affinis
ENSTNIG00000002994	polr2j	100	98.291	ENSGACG00000003310	polr2j	100	98.291	Gasterosteus_aculeatus
ENSTNIG00000002994	polr2j	97	84.956	ENSGAGG00000018304	-	96	84.956	Gopherus_agassizii
ENSTNIG00000002994	polr2j	85	89.000	ENSGGOG00000004519	-	80	89.000	Gorilla_gorilla
ENSTNIG00000002994	polr2j	100	98.291	ENSHBUG00000008467	polr2j	100	98.291	Haplochromis_burtoni
ENSTNIG00000002994	polr2j	100	94.872	ENSHGLG00000013598	POLR2J	100	94.872	Heterocephalus_glaber_female
ENSTNIG00000002994	polr2j	100	94.872	ENSHGLG00100011242	POLR2J	100	94.872	Heterocephalus_glaber_male
ENSTNIG00000002994	polr2j	100	96.581	ENSHCOG00000014827	polr2j	68	96.581	Hippocampus_comes
ENSTNIG00000002994	polr2j	100	96.581	ENSIPUG00000023960	polr2j	100	96.581	Ictalurus_punctatus
ENSTNIG00000002994	polr2j	100	94.872	ENSSTOG00000006377	POLR2J	100	94.872	Ictidomys_tridecemlineatus
ENSTNIG00000002994	polr2j	100	94.872	ENSJJAG00000013854	-	100	94.872	Jaculus_jaculus
ENSTNIG00000002994	polr2j	100	89.744	ENSJJAG00000018834	-	100	89.744	Jaculus_jaculus
ENSTNIG00000002994	polr2j	100	98.291	ENSKMAG00000014581	polr2j	79	98.291	Kryptolebias_marmoratus
ENSTNIG00000002994	polr2j	100	98.291	ENSLBEG00000005885	polr2j	100	98.291	Labrus_bergylta
ENSTNIG00000002994	polr2j	100	96.581	ENSLOCG00000001885	polr2j	89	96.581	Lepisosteus_oculatus
ENSTNIG00000002994	polr2j	100	94.872	ENSLAFG00000021507	-	100	94.872	Loxodonta_africana
ENSTNIG00000002994	polr2j	100	85.385	ENSMMUG00000012019	POLR2J	100	85.385	Macaca_mulatta
ENSTNIG00000002994	polr2j	100	98.291	ENSMAMG00000009374	polr2j	100	98.291	Mastacembelus_armatus
ENSTNIG00000002994	polr2j	100	98.291	ENSMZEG00005011932	polr2j	100	98.291	Maylandia_zebra
ENSTNIG00000002994	polr2j	100	94.872	ENSMGAG00000003534	POLR2J	100	94.872	Meleagris_gallopavo
ENSTNIG00000002994	polr2j	100	94.872	ENSMAUG00000013049	Polr2j	100	94.872	Mesocricetus_auratus
ENSTNIG00000002994	polr2j	80	89.362	ENSMICG00000026811	-	94	89.362	Microcebus_murinus
ENSTNIG00000002994	polr2j	100	94.872	ENSMOCG00000001294	Polr2j	100	94.872	Microtus_ochrogaster
ENSTNIG00000002994	polr2j	100	97.436	ENSMMOG00000013265	polr2j	100	97.436	Mola_mola
ENSTNIG00000002994	polr2j	100	86.719	ENSMODG00000013617	-	100	86.719	Monodelphis_domestica
ENSTNIG00000002994	polr2j	100	98.291	ENSMALG00000020749	polr2j	100	98.291	Monopterus_albus
ENSTNIG00000002994	polr2j	100	94.872	MGP_CAROLIEiJ_G0027851	Polr2j	100	94.872	Mus_caroli
ENSTNIG00000002994	polr2j	100	94.872	ENSMUSG00000039771	Polr2j	100	94.872	Mus_musculus
ENSTNIG00000002994	polr2j	100	94.872	MGP_PahariEiJ_G0024434	Polr2j	100	94.872	Mus_pahari
ENSTNIG00000002994	polr2j	100	94.872	MGP_SPRETEiJ_G0028853	Polr2j	100	94.872	Mus_spretus
ENSTNIG00000002994	polr2j	100	94.872	ENSMLUG00000010467	POLR2J	100	94.872	Myotis_lucifugus
ENSTNIG00000002994	polr2j	100	94.872	ENSNGAG00000023412	Polr2j	100	94.872	Nannospalax_galili
ENSTNIG00000002994	polr2j	66	94.805	ENSNBRG00000006580	polr2j	59	94.805	Neolamprologus_brichardi
ENSTNIG00000002994	polr2j	100	94.872	ENSODEG00000015648	-	100	94.872	Octodon_degus
ENSTNIG00000002994	polr2j	100	73.504	ENSODEG00000008559	-	100	73.504	Octodon_degus
ENSTNIG00000002994	polr2j	100	98.291	ENSONIG00000000259	polr2j	100	98.291	Oreochromis_niloticus
ENSTNIG00000002994	polr2j	100	92.308	ENSOANG00000020912	POLR2J	100	92.308	Ornithorhynchus_anatinus
ENSTNIG00000002994	polr2j	100	87.402	ENSOCUG00000023609	POLR2J	100	87.402	Oryctolagus_cuniculus
ENSTNIG00000002994	polr2j	100	98.291	ENSORLG00000029046	polr2j	83	98.291	Oryzias_latipes
ENSTNIG00000002994	polr2j	100	98.291	ENSORLG00020007625	polr2j	83	98.291	Oryzias_latipes_hni
ENSTNIG00000002994	polr2j	100	98.291	ENSORLG00015003457	polr2j	83	98.291	Oryzias_latipes_hsok
ENSTNIG00000002994	polr2j	100	97.436	ENSOMEG00000002097	polr2j	100	97.436	Oryzias_melastigma
ENSTNIG00000002994	polr2j	100	71.094	ENSOGAG00000008250	-	100	71.094	Otolemur_garnettii
ENSTNIG00000002994	polr2j	100	94.872	ENSOARG00000014204	-	98	94.872	Ovis_aries
ENSTNIG00000002994	polr2j	100	94.872	ENSPPRG00000012439	-	100	94.872	Panthera_pardus
ENSTNIG00000002994	polr2j	97	85.965	ENSPTIG00000018714	-	100	91.262	Panthera_tigris_altaica
ENSTNIG00000002994	polr2j	85	93.000	ENSPSIG00000010173	-	100	93.000	Pelodiscus_sinensis
ENSTNIG00000002994	polr2j	100	98.291	ENSPMGG00000021256	polr2j	100	98.291	Periophthalmus_magnuspinnatus
ENSTNIG00000002994	polr2j	100	94.872	ENSPEMG00000015733	Polr2j	100	94.872	Peromyscus_maniculatus_bairdii
ENSTNIG00000002994	polr2j	100	94.872	ENSPCIG00000009026	-	100	94.872	Phascolarctos_cinereus
ENSTNIG00000002994	polr2j	100	98.291	ENSPFOG00000012001	polr2j	99	98.291	Poecilia_formosa
ENSTNIG00000002994	polr2j	100	98.291	ENSPLAG00000014075	polr2j	100	98.291	Poecilia_latipinna
ENSTNIG00000002994	polr2j	100	98.291	ENSPMEG00000020585	polr2j	100	98.291	Poecilia_mexicana
ENSTNIG00000002994	polr2j	100	98.291	ENSPREG00000015255	polr2j	100	98.291	Poecilia_reticulata
ENSTNIG00000002994	polr2j	100	94.872	ENSPCOG00000024573	-	100	94.872	Propithecus_coquereli
ENSTNIG00000002994	polr2j	99	88.793	ENSPVAG00000017770	-	66	88.793	Pteropus_vampyrus
ENSTNIG00000002994	polr2j	100	98.291	ENSPNYG00000014832	polr2j	100	98.291	Pundamilia_nyererei
ENSTNIG00000002994	polr2j	100	94.017	ENSPNAG00000016595	polr2j	100	94.017	Pygocentrus_nattereri
ENSTNIG00000002994	polr2j	100	94.872	ENSRNOG00000001430	Polr2j	100	94.872	Rattus_norvegicus
ENSTNIG00000002994	polr2j	100	94.872	ENSSBOG00000025579	-	100	94.872	Saimiri_boliviensis_boliviensis
ENSTNIG00000002994	polr2j	59	97.101	ENSSHAG00000010443	-	81	97.101	Sarcophilus_harrisii
ENSTNIG00000002994	polr2j	93	94.495	ENSSFOG00015003371	polr2j	83	94.495	Scleropages_formosus
ENSTNIG00000002994	polr2j	100	98.291	ENSSMAG00000006729	polr2j	100	98.291	Scophthalmus_maximus
ENSTNIG00000002994	polr2j	100	98.291	ENSSDUG00000018490	polr2j	100	98.291	Seriola_dumerili
ENSTNIG00000002994	polr2j	100	98.291	ENSSLDG00000022354	polr2j	100	98.291	Seriola_lalandi_dorsalis
ENSTNIG00000002994	polr2j	100	94.872	ENSSPUG00000010802	-	100	94.872	Sphenodon_punctatus
ENSTNIG00000002994	polr2j	100	98.291	ENSSPAG00000021953	polr2j	100	98.291	Stegastes_partitus
ENSTNIG00000002994	polr2j	100	77.778	ENSSSCG00000003703	-	83	77.778	Sus_scrofa
ENSTNIG00000002994	polr2j	100	94.872	ENSSSCG00000007688	-	100	94.872	Sus_scrofa
ENSTNIG00000002994	polr2j	59	97.101	ENSTGUG00000004510	-	100	97.101	Taeniopygia_guttata
ENSTNIG00000002994	polr2j	85	93.000	ENSTGUG00000004501	-	100	93.000	Taeniopygia_guttata
ENSTNIG00000002994	polr2j	100	99.145	ENSTRUG00000020842	polr2j	100	99.145	Takifugu_rubripes
ENSTNIG00000002994	polr2j	91	79.439	ENSTBEG00000005797	-	70	79.439	Tupaia_belangeri
ENSTNIG00000002994	polr2j	100	94.872	ENSUAMG00000011310	-	100	94.872	Ursus_americanus
ENSTNIG00000002994	polr2j	100	94.872	ENSUMAG00000012594	-	100	94.872	Ursus_maritimus
ENSTNIG00000002994	polr2j	100	93.162	ENSXETG00000001108	polr2j	100	93.162	Xenopus_tropicalis
ENSTNIG00000002994	polr2j	100	98.291	ENSXMAG00000012422	polr2j	100	98.291	Xiphophorus_maculatus