EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000003015 (Gene tree)
Gene ID: -
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1572 bases
Position: chr3:13577197-13578768
Accession: ZDB-GENE-040426-1866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005585	MMR_HSR1	PF01926.23	3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005733	-	543	-	ENSTNIP00000005585	180 (aa)	-	H3CBG3

Gene Model

Click here to download ENSTNIG00000003015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000003015	arl5c	82	46.309	ENSTNIG00000010605	arl11	82	46.309
ENSTNIG00000003015	arl5c	88	37.107	ENSTNIG00000014233	arl3l2	85	37.107
ENSTNIG00000003015	arl5c	82	43.791	ENSTNIG00000015242	-	79	43.791
ENSTNIG00000003015	arl5c	98	46.328	ENSTNIG00000002029	arf2b	98	46.328
ENSTNIG00000003015	arl5c	66	45.669	ENSTNIG00000005278	arfrp1	92	45.669
ENSTNIG00000003015	arl5c	97	67.045	ENSTNIG00000005852	arl8	97	67.045
ENSTNIG00000003015	arl5c	96	41.040	ENSTNIG00000017954	-	97	41.040
ENSTNIG00000003015	arl5c	92	41.212	ENSTNIG00000013830	arl2	90	41.212
ENSTNIG00000003015	arl5c	90	38.323	ENSTNIG00000009430	ARL6	90	38.323
ENSTNIG00000003015	arl5c	72	44.615	ENSTNIG00000000796	-	57	44.615
ENSTNIG00000003015	arl5c	71	42.188	ENSTNIG00000018302	-	56	42.188
ENSTNIG00000003015	arl5c	98	47.159	ENSTNIG00000011685	-	98	47.159
ENSTNIG00000003015	arl5c	98	45.763	ENSTNIG00000014595	arf3b	98	45.763
ENSTNIG00000003015	arl5c	88	38.994	ENSTNIG00000009030	-	87	38.994
ENSTNIG00000003015	arl5c	71	44.882	ENSTNIG00000001632	-	56	44.882
ENSTNIG00000003015	arl5c	98	45.198	ENSTNIG00000015063	-	98	45.198
ENSTNIG00000003015	arl5c	97	38.384	ENSTNIG00000004395	ARL6	94	38.384
ENSTNIG00000003015	arl5c	98	68.182	ENSTNIG00000000814	arl5a	97	68.182
ENSTNIG00000003015	arl5c	52	47.872	ENSTNIG00000005043	-	83	47.872
ENSTNIG00000003015	arl5c	95	45.029	ENSTNIG00000006920	arl1	94	45.029
ENSTNIG00000003015	arl5c	88	41.667	ENSTNIG00000003426	-	83	41.667
ENSTNIG00000003015	arl5c	98	40.110	ENSTNIG00000000601	arl4aa	89	40.110
ENSTNIG00000003015	arl5c	96	42.442	ENSTNIG00000019582	arf6b	97	42.442
ENSTNIG00000003015	arl5c	96	39.306	ENSTNIG00000004344	arl3	95	39.306
ENSTNIG00000003015	arl5c	98	44.068	ENSTNIG00000003348	arf5	99	44.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003015	arl5c	99	87.709	ENSAPOG00000005821	arl5c	100	87.709	Acanthochromis_polyacanthus
ENSTNIG00000003015	arl5c	91	91.463	ENSACIG00000008975	arl5c	91	91.463	Amphilophus_citrinellus
ENSTNIG00000003015	arl5c	99	88.827	ENSAOCG00000010448	arl5c	100	88.827	Amphiprion_ocellaris
ENSTNIG00000003015	arl5c	99	88.827	ENSAPEG00000002699	arl5c	100	88.827	Amphiprion_percula
ENSTNIG00000003015	arl5c	99	85.475	ENSATEG00000000181	arl5c	100	85.475	Anabas_testudineus
ENSTNIG00000003015	arl5c	100	88.333	ENSACLG00000000922	arl5c	100	89.024	Astatotilapia_calliptera
ENSTNIG00000003015	arl5c	99	80.447	ENSAMXG00000031771	arl5c	100	80.447	Astyanax_mexicanus
ENSTNIG00000003015	arl5c	99	82.123	ENSCSEG00000009845	arl5c	100	82.123	Cynoglossus_semilaevis
ENSTNIG00000003015	arl5c	99	89.888	ENSCVAG00000012706	arl5c	99	89.888	Cyprinodon_variegatus
ENSTNIG00000003015	arl5c	99	79.888	ENSDARG00000035719	arl5c	100	79.888	Danio_rerio
ENSTNIG00000003015	arl5c	99	83.240	ENSELUG00000016864	arl5c	100	83.240	Esox_lucius
ENSTNIG00000003015	arl5c	99	89.944	ENSFHEG00000013677	arl5c	100	89.944	Fundulus_heteroclitus
ENSTNIG00000003015	arl5c	99	89.888	ENSGAFG00000002547	arl5c	99	89.888	Gambusia_affinis
ENSTNIG00000003015	arl5c	99	89.326	ENSGACG00000009321	arl5c	99	89.326	Gasterosteus_aculeatus
ENSTNIG00000003015	arl5c	99	88.827	ENSHBUG00000007301	arl5c	100	88.827	Haplochromis_burtoni
ENSTNIG00000003015	arl5c	99	84.916	ENSHCOG00000017576	-	100	84.916	Hippocampus_comes
ENSTNIG00000003015	arl5c	99	80.447	ENSIPUG00000023232	arl5c	100	80.447	Ictalurus_punctatus
ENSTNIG00000003015	arl5c	99	88.268	ENSKMAG00000011323	arl5c	100	88.268	Kryptolebias_marmoratus
ENSTNIG00000003015	arl5c	100	88.333	ENSLBEG00000006177	arl5c	87	88.333	Labrus_bergylta
ENSTNIG00000003015	arl5c	99	89.944	ENSMAMG00000022157	arl5c	100	89.944	Mastacembelus_armatus
ENSTNIG00000003015	arl5c	99	88.827	ENSMZEG00005022925	arl5c	100	88.827	Maylandia_zebra
ENSTNIG00000003015	arl5c	91	92.683	ENSMMOG00000020851	arl5c	96	92.683	Mola_mola
ENSTNIG00000003015	arl5c	91	86.585	ENSMALG00000009306	arl5c	93	86.585	Monopterus_albus
ENSTNIG00000003015	arl5c	99	89.385	ENSNBRG00000020245	arl5c	100	89.634	Neolamprologus_brichardi
ENSTNIG00000003015	arl5c	100	88.889	ENSONIG00000000890	arl5c	100	88.889	Oreochromis_niloticus
ENSTNIG00000003015	arl5c	99	83.240	ENSORLG00000002960	arl5c	100	83.537	Oryzias_latipes
ENSTNIG00000003015	arl5c	99	83.240	ENSORLG00020010074	arl5c	100	83.537	Oryzias_latipes_hni
ENSTNIG00000003015	arl5c	99	83.240	ENSORLG00015002752	arl5c	100	83.537	Oryzias_latipes_hsok
ENSTNIG00000003015	arl5c	96	82.081	ENSOMEG00000021718	arl5c	98	82.081	Oryzias_melastigma
ENSTNIG00000003015	arl5c	99	82.123	ENSPKIG00000021727	arl5c	100	82.123	Paramormyrops_kingsleyae
ENSTNIG00000003015	arl5c	99	89.385	ENSPFOG00000007842	arl5c	99	89.385	Poecilia_formosa
ENSTNIG00000003015	arl5c	99	88.827	ENSPLAG00000002394	arl5c	100	88.827	Poecilia_latipinna
ENSTNIG00000003015	arl5c	91	90.798	ENSPMEG00000000631	arl5c	94	90.798	Poecilia_mexicana
ENSTNIG00000003015	arl5c	99	89.944	ENSPREG00000008730	arl5c	100	89.944	Poecilia_reticulata
ENSTNIG00000003015	arl5c	99	88.827	ENSPNYG00000012720	arl5c	100	89.024	Pundamilia_nyererei
ENSTNIG00000003015	arl5c	99	80.447	ENSPNAG00000002310	arl5c	100	80.447	Pygocentrus_nattereri
ENSTNIG00000003015	arl5c	99	80.447	ENSSFOG00015023529	arl5c	100	80.447	Scleropages_formosus
ENSTNIG00000003015	arl5c	99	88.827	ENSSMAG00000010552	arl5c	100	88.827	Scophthalmus_maximus
ENSTNIG00000003015	arl5c	99	88.268	ENSSDUG00000022640	arl5c	100	88.268	Seriola_dumerili
ENSTNIG00000003015	arl5c	99	88.268	ENSSLDG00000000728	arl5c	100	88.268	Seriola_lalandi_dorsalis
ENSTNIG00000003015	arl5c	99	89.385	ENSSPAG00000007687	arl5c	100	89.385	Stegastes_partitus
ENSTNIG00000003015	arl5c	99	96.089	ENSTRUG00000022814	arl5c	100	96.089	Takifugu_rubripes
ENSTNIG00000003015	arl5c	99	88.764	ENSXCOG00000017380	arl5c	99	88.764	Xiphophorus_couchianus
ENSTNIG00000003015	arl5c	99	88.202	ENSXMAG00000008447	arl5c	99	88.202	Xiphophorus_maculatus