EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000003111 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4509 bases
Position: chrUn_random:56727170-56731678
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005683	ARS2	PF04959.13	2.6e-84	1	1
ENSTNIP00000000912	ARS2	PF04959.13	3.3e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000001732	-	2616	-	ENSTNIP00000000912	871 (aa)	-	H3BY47
ENSTNIT00000005831	-	2601	-	ENSTNIP00000005683	866 (aa)	-	H3CBR1

Gene Model

Click here to download ENSTNIG00000003111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000003111	-	74	52.226	ENSTNIG00000011779	srrt	100	51.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003111	-	53	61.620	ENSG00000087087	SRRT	98	65.217	Homo_sapiens
ENSTNIG00000003111	-	53	64.286	ENSAPOG00000002304	srrt	93	55.060	Acanthochromis_polyacanthus
ENSTNIG00000003111	-	53	61.771	ENSAMEG00000014506	SRRT	92	49.701	Ailuropoda_melanoleuca
ENSTNIG00000003111	-	81	64.502	ENSACIG00000015795	srrt	88	63.617	Amphilophus_citrinellus
ENSTNIG00000003111	-	93	73.100	ENSAOCG00000009189	-	93	73.123	Amphiprion_ocellaris
ENSTNIG00000003111	-	82	64.286	ENSAOCG00000009693	srrt	88	64.033	Amphiprion_ocellaris
ENSTNIG00000003111	-	81	64.069	ENSAPEG00000003646	srrt	88	63.617	Amphiprion_percula
ENSTNIG00000003111	-	93	72.979	ENSAPEG00000020016	-	93	73.002	Amphiprion_percula
ENSTNIG00000003111	-	61	78.424	ENSATEG00000003652	-	95	76.850	Anabas_testudineus
ENSTNIG00000003111	-	80	63.991	ENSATEG00000014425	srrt	84	63.333	Anabas_testudineus
ENSTNIG00000003111	-	54	61.028	ENSACAG00000001014	SRRT	54	59.789	Anolis_carolinensis
ENSTNIG00000003111	-	53	61.441	ENSANAG00000031718	SRRT	93	51.923	Aotus_nancymaae
ENSTNIG00000003111	-	53	63.853	ENSACLG00000013156	srrt	89	53.949	Astatotilapia_calliptera
ENSTNIG00000003111	-	93	72.282	ENSACLG00000009423	-	93	73.438	Astatotilapia_calliptera
ENSTNIG00000003111	-	52	62.500	ENSAMXG00000016671	srrt	89	51.446	Astyanax_mexicanus
ENSTNIG00000003111	-	53	61.311	ENSBTAG00000001134	SRRT	93	50.178	Bos_taurus
ENSTNIG00000003111	-	77	34.375	WBGene00017085	E01A2.2	88	38.969	Caenorhabditis_elegans
ENSTNIG00000003111	-	53	61.229	ENSCJAG00000014917	SRRT	93	49.822	Callithrix_jacchus
ENSTNIG00000003111	-	96	52.880	ENSCAFG00000023538	SRRT	93	51.435	Canis_familiaris
ENSTNIG00000003111	-	98	52.468	ENSCAFG00020013358	SRRT	97	49.328	Canis_lupus_dingo
ENSTNIG00000003111	-	53	61.311	ENSCHIG00000010495	SRRT	93	50.178	Capra_hircus
ENSTNIG00000003111	-	95	51.744	ENSTSYG00000036426	SRRT	96	49.041	Carlito_syrichta
ENSTNIG00000003111	-	53	61.771	ENSCAPG00000013586	SRRT	94	55.378	Cavia_aperea
ENSTNIG00000003111	-	53	61.522	ENSCPOG00000001739	SRRT	93	50.469	Cavia_porcellus
ENSTNIG00000003111	-	53	61.441	ENSCCAG00000015877	SRRT	93	50.178	Cebus_capucinus
ENSTNIG00000003111	-	53	61.620	ENSCATG00000036306	SRRT	94	50.588	Cercocebus_atys
ENSTNIG00000003111	-	96	52.729	ENSCLAG00000007568	SRRT	93	56.137	Chinchilla_lanigera
ENSTNIG00000003111	-	53	61.441	ENSCSAG00000017996	SRRT	93	51.008	Chlorocebus_sabaeus
ENSTNIG00000003111	-	54	55.873	ENSCHOG00000007815	SRRT	68	54.925	Choloepus_hoffmanni
ENSTNIG00000003111	-	69	55.000	ENSCPBG00000011553	SRRT	75	51.220	Chrysemys_picta_bellii
ENSTNIG00000003111	-	100	39.107	ENSCING00000003506	-	56	47.791	Ciona_intestinalis
ENSTNIG00000003111	-	100	39.064	ENSCSAVG00000008394	-	85	54.310	Ciona_savignyi
ENSTNIG00000003111	-	53	61.620	ENSCANG00000034556	SRRT	93	50.773	Colobus_angolensis_palliatus
ENSTNIG00000003111	-	96	52.480	ENSCGRG00001001594	Srrt	93	50.780	Cricetulus_griseus_chok1gshd
ENSTNIG00000003111	-	96	47.126	ENSCGRG00000007292	Srrt	94	55.110	Cricetulus_griseus_crigri
ENSTNIG00000003111	-	53	61.388	ENSCSEG00000017878	srrt	93	51.079	Cynoglossus_semilaevis
ENSTNIG00000003111	-	82	77.905	ENSCSEG00000005233	-	83	75.810	Cynoglossus_semilaevis
ENSTNIG00000003111	-	90	69.643	ENSCVAG00000017344	-	93	68.434	Cyprinodon_variegatus
ENSTNIG00000003111	-	94	54.446	ENSCVAG00000019848	srrt	93	55.030	Cyprinodon_variegatus
ENSTNIG00000003111	-	53	65.385	ENSDARG00000017762	srrt	92	53.095	Danio_rerio
ENSTNIG00000003111	-	53	61.441	ENSDNOG00000003851	SRRT	93	50.538	Dasypus_novemcinctus
ENSTNIG00000003111	-	96	52.846	ENSDORG00000005584	Srrt	97	54.492	Dipodomys_ordii
ENSTNIG00000003111	-	84	48.401	FBgn0033062	Ars2	64	47.771	Drosophila_melanogaster
ENSTNIG00000003111	-	75	58.873	ENSETEG00000016175	SRRT	63	65.625	Echinops_telfairi
ENSTNIG00000003111	-	78	48.110	ENSEBUG00000008517	-	83	57.292	Eptatretus_burgeri
ENSTNIG00000003111	-	96	52.315	ENSEASG00005016956	SRRT	93	51.329	Equus_asinus_asinus
ENSTNIG00000003111	-	96	52.315	ENSECAG00000012292	SRRT	93	51.329	Equus_caballus
ENSTNIG00000003111	-	78	59.036	ENSEEUG00000009117	SRRT	70	56.119	Erinaceus_europaeus
ENSTNIG00000003111	-	93	63.593	ENSELUG00000021216	-	93	62.694	Esox_lucius
ENSTNIG00000003111	-	53	61.653	ENSFCAG00000006855	SRRT	93	51.208	Felis_catus
ENSTNIG00000003111	-	53	58.606	ENSFDAG00000021347	SRRT	94	52.977	Fukomys_damarensis
ENSTNIG00000003111	-	55	69.295	ENSFHEG00000004105	-	98	66.392	Fundulus_heteroclitus
ENSTNIG00000003111	-	73	64.146	ENSFHEG00000002756	srrt	85	64.493	Fundulus_heteroclitus
ENSTNIG00000003111	-	95	53.613	ENSGMOG00000018619	srrt	92	51.449	Gadus_morhua
ENSTNIG00000003111	-	53	63.816	ENSGAFG00000005423	srrt	93	54.116	Gambusia_affinis
ENSTNIG00000003111	-	93	67.072	ENSGAFG00000020383	-	93	68.109	Gambusia_affinis
ENSTNIG00000003111	-	93	68.825	ENSGACG00000001100	-	93	69.065	Gasterosteus_aculeatus
ENSTNIG00000003111	-	95	55.245	ENSGACG00000020387	srrt	92	52.278	Gasterosteus_aculeatus
ENSTNIG00000003111	-	53	61.620	ENSGGOG00000001508	SRRT	93	50.892	Gorilla_gorilla
ENSTNIG00000003111	-	53	63.853	ENSHBUG00000002942	srrt	89	54.182	Haplochromis_burtoni
ENSTNIG00000003111	-	96	53.165	ENSHGLG00000008344	Srrt	94	56.137	Heterocephalus_glaber_female
ENSTNIG00000003111	-	96	53.410	ENSHGLG00100018857	Srrt	95	54.637	Heterocephalus_glaber_male
ENSTNIG00000003111	-	93	65.470	ENSHCOG00000008904	-	93	63.403	Hippocampus_comes
ENSTNIG00000003111	-	98	53.584	ENSHCOG00000005403	srrt	93	52.738	Hippocampus_comes
ENSTNIG00000003111	-	53	65.584	ENSIPUG00000021150	srrt	93	53.025	Ictalurus_punctatus
ENSTNIG00000003111	-	53	61.620	ENSSTOG00000013776	SRRT	93	51.446	Ictidomys_tridecemlineatus
ENSTNIG00000003111	-	96	51.724	ENSJJAG00000010446	Srrt	93	55.758	Jaculus_jaculus
ENSTNIG00000003111	-	94	55.366	ENSKMAG00000013599	srrt	93	54.688	Kryptolebias_marmoratus
ENSTNIG00000003111	-	93	68.483	ENSKMAG00000008468	-	93	67.895	Kryptolebias_marmoratus
ENSTNIG00000003111	-	96	54.152	ENSLBEG00000016308	srrt	92	53.790	Labrus_bergylta
ENSTNIG00000003111	-	65	66.939	ENSLBEG00000028983	-	97	66.456	Labrus_bergylta
ENSTNIG00000003111	-	50	48.980	ENSLACG00000001089	SRRT	57	47.305	Latimeria_chalumnae
ENSTNIG00000003111	-	52	54.066	ENSLOCG00000013658	srrt	96	47.739	Lepisosteus_oculatus
ENSTNIG00000003111	-	53	61.441	ENSLAFG00000007725	SRRT	93	52.273	Loxodonta_africana
ENSTNIG00000003111	-	53	61.620	ENSMFAG00000033745	SRRT	97	50.588	Macaca_fascicularis
ENSTNIG00000003111	-	96	51.932	ENSMMUG00000021255	SRRT	93	51.066	Macaca_mulatta
ENSTNIG00000003111	-	53	61.441	ENSMNEG00000041864	SRRT	94	50.588	Macaca_nemestrina
ENSTNIG00000003111	-	53	61.620	ENSMLEG00000029479	SRRT	95	50.588	Mandrillus_leucophaeus
ENSTNIG00000003111	-	53	63.377	ENSMAMG00000014311	srrt	93	53.623	Mastacembelus_armatus
ENSTNIG00000003111	-	93	74.605	ENSMAMG00000010681	-	93	74.362	Mastacembelus_armatus
ENSTNIG00000003111	-	53	63.853	ENSMZEG00005016135	srrt	89	54.070	Maylandia_zebra
ENSTNIG00000003111	-	93	72.282	ENSMZEG00005028002	-	93	73.438	Maylandia_zebra
ENSTNIG00000003111	-	96	53.009	ENSMAUG00000011386	Srrt	95	55.010	Mesocricetus_auratus
ENSTNIG00000003111	-	53	61.441	ENSMICG00000009471	SRRT	95	51.251	Microcebus_murinus
ENSTNIG00000003111	-	96	52.535	ENSMOCG00000001971	Srrt	94	56.187	Microtus_ochrogaster
ENSTNIG00000003111	-	83	73.461	ENSMMOG00000011137	-	88	73.025	Mola_mola
ENSTNIG00000003111	-	95	54.340	ENSMMOG00000016399	srrt	92	52.754	Mola_mola
ENSTNIG00000003111	-	53	58.737	ENSMODG00000004862	SRRT	97	56.311	Monodelphis_domestica
ENSTNIG00000003111	-	55	62.926	ENSMALG00000005567	-	89	63.126	Monopterus_albus
ENSTNIG00000003111	-	90	51.171	ENSMALG00000018604	srrt	96	50.792	Monopterus_albus
ENSTNIG00000003111	-	96	52.681	MGP_CAROLIEiJ_G0027870	Srrt	95	55.598	Mus_caroli
ENSTNIG00000003111	-	96	52.681	ENSMUSG00000037364	Srrt	94	56.389	Mus_musculus
ENSTNIG00000003111	-	96	52.331	MGP_PahariEiJ_G0024456	Srrt	95	55.598	Mus_pahari
ENSTNIG00000003111	-	96	52.681	MGP_SPRETEiJ_G0028875	Srrt	95	55.598	Mus_spretus
ENSTNIG00000003111	-	96	52.139	ENSMPUG00000015839	SRRT	93	50.060	Mustela_putorius_furo
ENSTNIG00000003111	-	53	60.934	ENSMLUG00000009975	SRRT	93	51.202	Myotis_lucifugus
ENSTNIG00000003111	-	96	52.194	ENSNGAG00000023715	Srrt	100	52.708	Nannospalax_galili
ENSTNIG00000003111	-	53	63.557	ENSNBRG00000019100	srrt	92	53.593	Neolamprologus_brichardi
ENSTNIG00000003111	-	52	55.435	ENSNLEG00000011987	SRRT	93	55.172	Nomascus_leucogenys
ENSTNIG00000003111	-	96	44.496	ENSMEUG00000011941	SRRT	92	44.338	Notamacropus_eugenii
ENSTNIG00000003111	-	62	55.609	ENSOPRG00000002502	-	67	54.846	Ochotona_princeps
ENSTNIG00000003111	-	53	61.987	ENSODEG00000016856	SRRT	94	56.048	Octodon_degus
ENSTNIG00000003111	-	53	64.069	ENSONIG00000004242	srrt	93	53.047	Oreochromis_niloticus
ENSTNIG00000003111	-	98	72.460	ENSONIG00000016080	-	93	73.022	Oreochromis_niloticus
ENSTNIG00000003111	-	95	54.123	ENSORLG00000008120	srrt	93	52.593	Oryzias_latipes
ENSTNIG00000003111	-	95	54.239	ENSORLG00020003058	srrt	93	52.352	Oryzias_latipes_hni
ENSTNIG00000003111	-	95	54.355	ENSORLG00015008062	srrt	93	52.593	Oryzias_latipes_hsok
ENSTNIG00000003111	-	95	54.054	ENSOMEG00000003155	srrt	86	62.055	Oryzias_melastigma
ENSTNIG00000003111	-	93	71.728	ENSOMEG00000006963	-	93	71.166	Oryzias_melastigma
ENSTNIG00000003111	-	53	61.441	ENSOGAG00000017242	SRRT	93	51.803	Otolemur_garnettii
ENSTNIG00000003111	-	53	61.277	ENSOARG00000015645	SRRT	93	49.941	Ovis_aries
ENSTNIG00000003111	-	53	61.620	ENSPPAG00000041090	SRRT	93	49.703	Pan_paniscus
ENSTNIG00000003111	-	53	61.702	ENSPPRG00000009557	SRRT	93	50.601	Panthera_pardus
ENSTNIG00000003111	-	53	61.653	ENSPTIG00000014355	SRRT	93	50.299	Panthera_tigris_altaica
ENSTNIG00000003111	-	53	61.620	ENSPTRG00000019511	SRRT	98	47.953	Pan_troglodytes
ENSTNIG00000003111	-	53	60.417	ENSPANG00000020763	SRRT	94	50.588	Papio_anubis
ENSTNIG00000003111	-	94	54.654	ENSPKIG00000022212	-	93	55.244	Paramormyrops_kingsleyae
ENSTNIG00000003111	-	96	55.088	ENSPKIG00000005434	srrt	92	54.728	Paramormyrops_kingsleyae
ENSTNIG00000003111	-	53	61.638	ENSPSIG00000016311	SRRT	93	50.000	Pelodiscus_sinensis
ENSTNIG00000003111	-	53	62.260	ENSPMGG00000002841	srrt	92	53.178	Periophthalmus_magnuspinnatus
ENSTNIG00000003111	-	96	52.791	ENSPEMG00000010834	Srrt	93	55.781	Peromyscus_maniculatus_bairdii
ENSTNIG00000003111	-	94	49.586	ENSPMAG00000009614	-	58	56.653	Petromyzon_marinus
ENSTNIG00000003111	-	53	59.916	ENSPCIG00000000816	SRRT	93	50.721	Phascolarctos_cinereus
ENSTNIG00000003111	-	93	68.642	ENSPFOG00000016554	-	93	68.525	Poecilia_formosa
ENSTNIG00000003111	-	53	64.035	ENSPFOG00000005704	srrt	93	54.303	Poecilia_formosa
ENSTNIG00000003111	-	53	63.974	ENSPLAG00000021992	srrt	54	62.963	Poecilia_latipinna
ENSTNIG00000003111	-	93	67.813	ENSPLAG00000004526	-	93	66.176	Poecilia_latipinna
ENSTNIG00000003111	-	88	68.359	ENSPMEG00000001520	-	91	68.264	Poecilia_mexicana
ENSTNIG00000003111	-	77	63.441	ENSPMEG00000001182	srrt	93	54.182	Poecilia_mexicana
ENSTNIG00000003111	-	94	54.946	ENSPREG00000022308	srrt	93	54.424	Poecilia_reticulata
ENSTNIG00000003111	-	53	59.375	ENSPCAG00000001621	SRRT	56	55.754	Procavia_capensis
ENSTNIG00000003111	-	96	47.576	ENSPCOG00000025751	SRRT	93	51.847	Propithecus_coquereli
ENSTNIG00000003111	-	61	55.556	ENSPVAG00000000834	SRRT	100	45.455	Pteropus_vampyrus
ENSTNIG00000003111	-	53	63.853	ENSPNYG00000018710	srrt	93	54.061	Pundamilia_nyererei
ENSTNIG00000003111	-	73	59.259	ENSPNAG00000010629	srrt	91	41.156	Pygocentrus_nattereri
ENSTNIG00000003111	-	53	52.017	ENSRNOG00000048277	AABR07035787.1	97	49.593	Rattus_norvegicus
ENSTNIG00000003111	-	53	61.441	ENSRBIG00000035718	SRRT	94	50.588	Rhinopithecus_bieti
ENSTNIG00000003111	-	53	61.441	ENSRROG00000030622	SRRT	95	50.588	Rhinopithecus_roxellana
ENSTNIG00000003111	-	53	61.620	ENSSBOG00000033570	SRRT	94	49.941	Saimiri_boliviensis_boliviensis
ENSTNIG00000003111	-	55	57.631	ENSSHAG00000007349	-	77	58.384	Sarcophilus_harrisii
ENSTNIG00000003111	-	53	66.161	ENSSFOG00015017293	srrt	92	54.697	Scleropages_formosus
ENSTNIG00000003111	-	53	77.825	ENSSMAG00000018195	-	93	67.359	Scophthalmus_maximus
ENSTNIG00000003111	-	53	65.727	ENSSMAG00000015342	srrt	93	53.912	Scophthalmus_maximus
ENSTNIG00000003111	-	54	69.556	ENSSDUG00000002051	-	98	67.490	Seriola_dumerili
ENSTNIG00000003111	-	53	65.293	ENSSDUG00000012049	srrt	92	54.024	Seriola_dumerili
ENSTNIG00000003111	-	78	64.859	ENSSLDG00000017477	srrt	81	63.017	Seriola_lalandi_dorsalis
ENSTNIG00000003111	-	53	63.871	ENSSPAG00000005665	srrt	91	54.796	Stegastes_partitus
ENSTNIG00000003111	-	86	73.698	ENSSPAG00000018943	-	97	73.904	Stegastes_partitus
ENSTNIG00000003111	-	51	60.573	ENSSSCG00000024789	SRRT	98	50.182	Sus_scrofa
ENSTNIG00000003111	-	90	80.102	ENSTRUG00000000023	-	91	78.061	Takifugu_rubripes
ENSTNIG00000003111	-	95	53.656	ENSTRUG00000016075	srrt	93	52.358	Takifugu_rubripes
ENSTNIG00000003111	-	53	61.441	ENSTTRG00000011104	SRRT	93	50.178	Tursiops_truncatus
ENSTNIG00000003111	-	53	61.441	ENSUAMG00000027997	SRRT	95	51.322	Ursus_americanus
ENSTNIG00000003111	-	53	61.441	ENSUMAG00000011295	SRRT	93	51.322	Ursus_maritimus
ENSTNIG00000003111	-	96	52.880	ENSVVUG00000023572	SRRT	93	51.435	Vulpes_vulpes
ENSTNIG00000003111	-	71	56.871	ENSXETG00000025124	srrt	92	42.024	Xenopus_tropicalis
ENSTNIG00000003111	-	56	60.324	ENSXCOG00000013105	-	100	59.920	Xiphophorus_couchianus
ENSTNIG00000003111	-	80	63.226	ENSXMAG00000007627	srrt	93	54.358	Xiphophorus_maculatus
ENSTNIG00000003111	-	93	68.093	ENSXMAG00000002090	-	93	68.812	Xiphophorus_maculatus