EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000003116 (Gene tree)
Gene ID: -
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 7784 bases
Position: chr14:4239246-4247029
Accession: ZDB-GENE-081031-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005688	PUF	PF00806.19	5.1e-66	1	7
ENSTNIP00000005688	PUF	PF00806.19	5.1e-66	2	7
ENSTNIP00000005688	PUF	PF00806.19	5.1e-66	3	7
ENSTNIP00000005688	PUF	PF00806.19	5.1e-66	4	7
ENSTNIP00000005688	PUF	PF00806.19	5.1e-66	5	7
ENSTNIP00000005688	PUF	PF00806.19	5.1e-66	6	7
ENSTNIP00000005688	PUF	PF00806.19	5.1e-66	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005836	-	3564	-	ENSTNIP00000005688	1188 (aa)	-	H3CBR6

Gene Model

Click here to download ENSTNIG00000003116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003116	pum2	90	75.668	ENSG00000055917	PUM2	100	73.529	Homo_sapiens
ENSTNIG00000003116	pum2	90	75.392	ENSAMEG00000002823	PUM2	100	73.752	Ailuropoda_melanoleuca
ENSTNIG00000003116	pum2	91	97.479	ENSACIG00000010646	pum2	96	97.479	Amphilophus_citrinellus
ENSTNIG00000003116	pum2	99	92.456	ENSAOCG00000016619	pum2	98	92.640	Amphiprion_ocellaris
ENSTNIG00000003116	pum2	100	92.552	ENSAPEG00000019924	pum2	100	92.720	Amphiprion_percula
ENSTNIG00000003116	pum2	100	91.709	ENSATEG00000015030	pum2	100	91.960	Anabas_testudineus
ENSTNIG00000003116	pum2	100	71.595	ENSAPLG00000010496	PUM2	100	70.515	Anas_platyrhynchos
ENSTNIG00000003116	pum2	90	74.307	ENSACAG00000010491	PUM2	100	72.181	Anolis_carolinensis
ENSTNIG00000003116	pum2	90	75.760	ENSANAG00000021807	PUM2	100	73.456	Aotus_nancymaae
ENSTNIG00000003116	pum2	100	91.549	ENSACLG00000022532	pum2	100	92.212	Astatotilapia_calliptera
ENSTNIG00000003116	pum2	90	74.931	ENSBTAG00000011155	PUM2	99	77.898	Bos_taurus
ENSTNIG00000003116	pum2	90	75.668	ENSCJAG00000007450	PUM2	100	73.364	Callithrix_jacchus
ENSTNIG00000003116	pum2	90	74.931	ENSCAFG00000003839	PUM2	100	73.013	Canis_familiaris
ENSTNIG00000003116	pum2	90	74.283	ENSCAFG00020025689	PUM2	100	72.089	Canis_lupus_dingo
ENSTNIG00000003116	pum2	90	74.931	ENSCHIG00000022180	PUM2	100	73.013	Capra_hircus
ENSTNIG00000003116	pum2	90	74.747	ENSTSYG00000014463	PUM2	100	73.500	Carlito_syrichta
ENSTNIG00000003116	pum2	89	87.349	ENSCAPG00000016888	PUM2	99	84.778	Cavia_aperea
ENSTNIG00000003116	pum2	90	76.221	ENSCPOG00000031996	PUM2	100	74.194	Cavia_porcellus
ENSTNIG00000003116	pum2	90	75.760	ENSCCAG00000037035	PUM2	100	73.456	Cebus_capucinus
ENSTNIG00000003116	pum2	90	75.853	ENSCATG00000043826	PUM2	100	73.548	Cercocebus_atys
ENSTNIG00000003116	pum2	90	76.313	ENSCLAG00000006048	PUM2	100	73.917	Chinchilla_lanigera
ENSTNIG00000003116	pum2	90	75.853	ENSCSAG00000008087	PUM2	100	73.548	Chlorocebus_sabaeus
ENSTNIG00000003116	pum2	63	74.312	ENSCHOG00000004575	PUM2	79	74.312	Choloepus_hoffmanni
ENSTNIG00000003116	pum2	90	75.760	ENSCANG00000032797	PUM2	100	73.456	Colobus_angolensis_palliatus
ENSTNIG00000003116	pum2	90	75.576	ENSCGRG00001025023	Pum2	100	73.180	Cricetulus_griseus_chok1gshd
ENSTNIG00000003116	pum2	90	75.760	ENSCGRG00000001580	Pum2	100	73.364	Cricetulus_griseus_crigri
ENSTNIG00000003116	pum2	100	89.289	ENSCSEG00000020899	pum2	100	89.540	Cynoglossus_semilaevis
ENSTNIG00000003116	pum2	100	90.704	ENSCVAG00000002426	pum2	100	89.601	Cyprinodon_variegatus
ENSTNIG00000003116	pum2	100	85.142	ENSDARG00000061040	pum2	100	84.307	Danio_rerio
ENSTNIG00000003116	pum2	90	72.319	ENSDNOG00000006733	PUM2	100	70.513	Dasypus_novemcinctus
ENSTNIG00000003116	pum2	90	71.837	ENSDORG00000011453	Pum2	100	69.898	Dipodomys_ordii
ENSTNIG00000003116	pum2	78	89.680	ENSETEG00000017683	PUM2	79	89.680	Echinops_telfairi
ENSTNIG00000003116	pum2	85	59.324	ENSEBUG00000004435	pum2	96	57.808	Eptatretus_burgeri
ENSTNIG00000003116	pum2	63	60.248	ENSEBUG00000014828	pum2	93	58.302	Eptatretus_burgeri
ENSTNIG00000003116	pum2	90	74.931	ENSEASG00005009429	PUM2	100	73.013	Equus_asinus_asinus
ENSTNIG00000003116	pum2	90	74.931	ENSECAG00000021930	PUM2	99	77.589	Equus_caballus
ENSTNIG00000003116	pum2	68	69.811	ENSEEUG00000003224	-	74	69.811	Erinaceus_europaeus
ENSTNIG00000003116	pum2	100	85.797	ENSELUG00000014997	pum2	100	85.797	Esox_lucius
ENSTNIG00000003116	pum2	90	74.839	ENSFCAG00000027520	PUM2	100	72.921	Felis_catus
ENSTNIG00000003116	pum2	90	74.446	ENSFALG00000001759	PUM2	100	73.063	Ficedula_albicollis
ENSTNIG00000003116	pum2	90	75.115	ENSFDAG00000019685	PUM2	100	73.297	Fukomys_damarensis
ENSTNIG00000003116	pum2	100	88.653	ENSFHEG00000021596	pum2	100	88.408	Fundulus_heteroclitus
ENSTNIG00000003116	pum2	90	84.658	ENSGMOG00000006903	pum2	100	84.288	Gadus_morhua
ENSTNIG00000003116	pum2	90	73.937	ENSGALG00000016481	PUM2	100	72.643	Gallus_gallus
ENSTNIG00000003116	pum2	100	90.377	ENSGAFG00000013691	pum2	100	90.962	Gambusia_affinis
ENSTNIG00000003116	pum2	90	89.023	ENSGACG00000009670	pum2	100	88.651	Gasterosteus_aculeatus
ENSTNIG00000003116	pum2	100	71.487	ENSGAGG00000020698	PUM2	100	72.669	Gopherus_agassizii
ENSTNIG00000003116	pum2	90	75.760	ENSGGOG00000011374	PUM2	100	73.456	Gorilla_gorilla
ENSTNIG00000003116	pum2	100	92.827	ENSHBUG00000016453	pum2	100	85.188	Haplochromis_burtoni
ENSTNIG00000003116	pum2	90	74.747	ENSHGLG00000007892	PUM2	100	72.535	Heterocephalus_glaber_female
ENSTNIG00000003116	pum2	90	74.586	ENSHGLG00100015510	PUM2	100	72.376	Heterocephalus_glaber_male
ENSTNIG00000003116	pum2	100	89.028	ENSHCOG00000010119	pum2	100	89.698	Hippocampus_comes
ENSTNIG00000003116	pum2	90	75.716	ENSSTOG00000006262	PUM2	100	73.777	Ictidomys_tridecemlineatus
ENSTNIG00000003116	pum2	90	76.313	ENSJJAG00000020969	Pum2	100	74.009	Jaculus_jaculus
ENSTNIG00000003116	pum2	100	90.301	ENSKMAG00000017216	pum2	100	90.552	Kryptolebias_marmoratus
ENSTNIG00000003116	pum2	100	91.381	ENSLBEG00000020488	pum2	100	91.046	Labrus_bergylta
ENSTNIG00000003116	pum2	100	73.590	ENSLACG00000008723	PUM2	100	72.876	Latimeria_chalumnae
ENSTNIG00000003116	pum2	100	75.755	ENSLOCG00000017196	pum2	100	73.956	Lepisosteus_oculatus
ENSTNIG00000003116	pum2	90	75.392	ENSLAFG00000009278	PUM2	100	73.364	Loxodonta_africana
ENSTNIG00000003116	pum2	90	75.853	ENSMFAG00000000492	PUM2	100	73.548	Macaca_fascicularis
ENSTNIG00000003116	pum2	90	75.853	ENSMMUG00000023181	PUM2	100	73.548	Macaca_mulatta
ENSTNIG00000003116	pum2	90	75.853	ENSMNEG00000039659	PUM2	100	73.548	Macaca_nemestrina
ENSTNIG00000003116	pum2	90	75.853	ENSMLEG00000039243	PUM2	100	73.548	Mandrillus_leucophaeus
ENSTNIG00000003116	pum2	100	91.715	ENSMAMG00000006121	pum2	100	91.297	Mastacembelus_armatus
ENSTNIG00000003116	pum2	100	91.384	ENSMZEG00005000791	pum2	100	92.046	Maylandia_zebra
ENSTNIG00000003116	pum2	90	73.937	ENSMGAG00000014040	PUM2	100	72.643	Meleagris_gallopavo
ENSTNIG00000003116	pum2	90	75.853	ENSMAUG00000000311	Pum2	100	73.456	Mesocricetus_auratus
ENSTNIG00000003116	pum2	90	75.760	ENSMICG00000011647	PUM2	100	73.456	Microcebus_murinus
ENSTNIG00000003116	pum2	90	75.576	ENSMOCG00000013663	Pum2	100	73.407	Microtus_ochrogaster
ENSTNIG00000003116	pum2	90	90.093	ENSMMOG00000002975	pum2	100	89.157	Mola_mola
ENSTNIG00000003116	pum2	90	74.149	ENSMODG00000009811	PUM2	100	72.309	Monodelphis_domestica
ENSTNIG00000003116	pum2	90	75.760	MGP_CAROLIEiJ_G0017603	Pum2	99	76.426	Mus_caroli
ENSTNIG00000003116	pum2	90	75.668	ENSMUSG00000020594	Pum2	98	76.046	Mus_musculus
ENSTNIG00000003116	pum2	90	76.221	MGP_PahariEiJ_G0029361	Pum2	99	76.426	Mus_pahari
ENSTNIG00000003116	pum2	90	75.760	MGP_SPRETEiJ_G0018447	Pum2	99	76.046	Mus_spretus
ENSTNIG00000003116	pum2	90	75.115	ENSMPUG00000013734	PUM2	100	73.198	Mustela_putorius_furo
ENSTNIG00000003116	pum2	90	74.862	ENSMLUG00000007362	PUM2	100	72.921	Myotis_lucifugus
ENSTNIG00000003116	pum2	89	50.689	ENSNGAG00000016239	-	99	52.170	Nannospalax_galili
ENSTNIG00000003116	pum2	90	75.760	ENSNGAG00000016665	-	100	73.407	Nannospalax_galili
ENSTNIG00000003116	pum2	90	75.760	ENSNLEG00000002509	PUM2	100	73.456	Nomascus_leucogenys
ENSTNIG00000003116	pum2	84	71.628	ENSMEUG00000016567	PUM2	100	66.636	Notamacropus_eugenii
ENSTNIG00000003116	pum2	68	69.604	ENSOPRG00000001963	PUM2	93	60.109	Ochotona_princeps
ENSTNIG00000003116	pum2	90	75.853	ENSODEG00000007823	PUM2	100	73.684	Octodon_degus
ENSTNIG00000003116	pum2	100	92.308	ENSONIG00000006119	pum2	100	92.977	Oreochromis_niloticus
ENSTNIG00000003116	pum2	90	75.668	ENSOCUG00000017908	PUM2	100	73.364	Oryctolagus_cuniculus
ENSTNIG00000003116	pum2	100	88.507	ENSORLG00000012611	pum2	99	95.610	Oryzias_latipes
ENSTNIG00000003116	pum2	100	88.423	ENSORLG00020014452	pum2	100	89.010	Oryzias_latipes_hni
ENSTNIG00000003116	pum2	100	88.674	ENSORLG00015009427	pum2	100	89.262	Oryzias_latipes_hsok
ENSTNIG00000003116	pum2	90	74.701	ENSOARG00000017236	PUM2	100	72.878	Ovis_aries
ENSTNIG00000003116	pum2	90	75.760	ENSPPAG00000023095	PUM2	100	73.456	Pan_paniscus
ENSTNIG00000003116	pum2	90	74.839	ENSPPRG00000021443	PUM2	100	73.002	Panthera_pardus
ENSTNIG00000003116	pum2	90	74.839	ENSPTIG00000018982	PUM2	100	72.921	Panthera_tigris_altaica
ENSTNIG00000003116	pum2	90	75.760	ENSPTRG00000011692	PUM2	100	73.456	Pan_troglodytes
ENSTNIG00000003116	pum2	90	61.687	ENSPANG00000009393	PUM2	100	87.324	Papio_anubis
ENSTNIG00000003116	pum2	100	72.578	ENSPSIG00000011626	PUM2	99	71.429	Pelodiscus_sinensis
ENSTNIG00000003116	pum2	90	75.576	ENSPEMG00000008357	Pum2	100	73.180	Peromyscus_maniculatus_bairdii
ENSTNIG00000003116	pum2	90	61.580	ENSPMAG00000007038	pum2	100	59.545	Petromyzon_marinus
ENSTNIG00000003116	pum2	90	72.335	ENSPCIG00000022139	PUM2	100	70.707	Phascolarctos_cinereus
ENSTNIG00000003116	pum2	100	89.089	ENSPFOG00000019208	pum2	100	89.664	Poecilia_formosa
ENSTNIG00000003116	pum2	100	90.879	ENSPLAG00000001826	pum2	100	91.464	Poecilia_latipinna
ENSTNIG00000003116	pum2	100	90.879	ENSPMEG00000015766	pum2	100	92.992	Poecilia_mexicana
ENSTNIG00000003116	pum2	90	75.945	ENSPPYG00000012617	PUM2	100	73.641	Pongo_abelii
ENSTNIG00000003116	pum2	63	91.304	ENSPCAG00000008001	PUM2	70	91.304	Procavia_capensis
ENSTNIG00000003116	pum2	88	75.817	ENSPCOG00000019636	PUM2	100	73.483	Propithecus_coquereli
ENSTNIG00000003116	pum2	88	69.850	ENSPVAG00000002920	PUM2	100	67.887	Pteropus_vampyrus
ENSTNIG00000003116	pum2	100	91.466	ENSPNYG00000022901	pum2	100	92.129	Pundamilia_nyererei
ENSTNIG00000003116	pum2	98	86.332	ENSPNAG00000008025	pum2	99	86.332	Pygocentrus_nattereri
ENSTNIG00000003116	pum2	90	74.470	ENSRNOG00000006180	Pum2	100	73.272	Rattus_norvegicus
ENSTNIG00000003116	pum2	90	75.760	ENSRBIG00000044880	PUM2	100	73.567	Rhinopithecus_bieti
ENSTNIG00000003116	pum2	90	75.760	ENSSBOG00000022007	PUM2	100	73.456	Saimiri_boliviensis_boliviensis
ENSTNIG00000003116	pum2	91	76.550	ENSSFOG00015003476	pum2	100	75.333	Scleropages_formosus
ENSTNIG00000003116	pum2	100	89.808	ENSSMAG00000018236	pum2	100	90.643	Scophthalmus_maximus
ENSTNIG00000003116	pum2	97	91.549	ENSSDUG00000001800	pum2	100	91.549	Seriola_dumerili
ENSTNIG00000003116	pum2	100	91.890	ENSSLDG00000000981	pum2	100	92.224	Seriola_lalandi_dorsalis
ENSTNIG00000003116	pum2	86	67.263	ENSSARG00000010992	PUM2	86	64.422	Sorex_araneus
ENSTNIG00000003116	pum2	89	73.974	ENSSPUG00000017012	PUM2	99	72.481	Sphenodon_punctatus
ENSTNIG00000003116	pum2	100	92.134	ENSSPAG00000022948	pum2	100	92.636	Stegastes_partitus
ENSTNIG00000003116	pum2	90	74.747	ENSSSCG00000008600	PUM2	99	77.434	Sus_scrofa
ENSTNIG00000003116	pum2	90	74.354	ENSTGUG00000013149	PUM2	100	72.970	Taeniopygia_guttata
ENSTNIG00000003116	pum2	100	89.513	ENSTRUG00000018167	pum2	100	89.241	Takifugu_rubripes
ENSTNIG00000003116	pum2	71	88.477	ENSTBEG00000008729	PUM2	76	85.447	Tupaia_belangeri
ENSTNIG00000003116	pum2	90	74.654	ENSTTRG00000004887	PUM2	100	72.736	Tursiops_truncatus
ENSTNIG00000003116	pum2	64	79.103	ENSUAMG00000008120	PUM2	97	76.804	Ursus_americanus
ENSTNIG00000003116	pum2	90	75.115	ENSUMAG00000023198	PUM2	100	73.198	Ursus_maritimus
ENSTNIG00000003116	pum2	90	74.793	ENSVPAG00000005056	PUM2	100	72.878	Vicugna_pacos
ENSTNIG00000003116	pum2	90	75.023	ENSVVUG00000014829	PUM2	100	73.105	Vulpes_vulpes
ENSTNIG00000003116	pum2	100	68.766	ENSXETG00000008903	pum2	100	66.446	Xenopus_tropicalis
ENSTNIG00000003116	pum2	97	87.549	ENSXCOG00000002556	pum2	100	87.840	Xiphophorus_couchianus
ENSTNIG00000003116	pum2	100	90.711	ENSXMAG00000017682	pum2	100	91.297	Xiphophorus_maculatus