EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000003157 (Gene tree)
Gene ID: -
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 5020 bases
Position: chrUn_random:34864456-34869475
Accession: ZDB-GENE-050327-81
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005732	KH_1	PF00013.29	1.1e-15	1	1
ENSTNIP00000005733	KH_1	PF00013.29	1.1e-15	1	1
ENSTNIP00000005732	TUDOR	PF00567.24	3.9e-26	1	1
ENSTNIP00000005733	TUDOR	PF00567.24	4.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005880	-	1668	-	ENSTNIP00000005732	555 (aa)	-	H3CBW0
ENSTNIT00000005881	-	1710	-	ENSTNIP00000005733	569 (aa)	-	H3CBW1

Gene Model

Click here to download ENSTNIG00000003157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003157's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003157	tdrkh	99	70.232	ENSAPOG00000012653	tdrkh	99	70.232	Acanthochromis_polyacanthus
ENSTNIG00000003157	tdrkh	97	67.225	ENSACIG00000010318	tdrkh	98	67.225	Amphilophus_citrinellus
ENSTNIG00000003157	tdrkh	99	70.053	ENSAOCG00000020623	tdrkh	99	70.053	Amphiprion_ocellaris
ENSTNIG00000003157	tdrkh	99	70.410	ENSAPEG00000018388	tdrkh	99	70.410	Amphiprion_percula
ENSTNIG00000003157	tdrkh	99	69.659	ENSATEG00000023809	tdrkh	99	69.659	Anabas_testudineus
ENSTNIG00000003157	tdrkh	99	66.847	ENSACLG00000003017	tdrkh	99	66.847	Astatotilapia_calliptera
ENSTNIG00000003157	tdrkh	99	57.679	ENSAMXG00000011664	tdrkh	94	57.679	Astyanax_mexicanus
ENSTNIG00000003157	tdrkh	99	62.791	ENSCSEG00000002894	tdrkh	99	62.791	Cynoglossus_semilaevis
ENSTNIG00000003157	tdrkh	61	74.384	ENSCVAG00000020347	tdrkh	76	74.384	Cyprinodon_variegatus
ENSTNIG00000003157	tdrkh	100	57.719	ENSDARG00000053474	tdrkh	100	52.804	Danio_rerio
ENSTNIG00000003157	tdrkh	99	60.315	ENSELUG00000024537	tdrkh	94	60.315	Esox_lucius
ENSTNIG00000003157	tdrkh	99	66.964	ENSFHEG00000003544	tdrkh	99	66.964	Fundulus_heteroclitus
ENSTNIG00000003157	tdrkh	99	60.503	ENSGMOG00000009304	tdrkh	94	60.503	Gadus_morhua
ENSTNIG00000003157	tdrkh	99	65.350	ENSGAFG00000010754	tdrkh	99	65.350	Gambusia_affinis
ENSTNIG00000003157	tdrkh	99	63.958	ENSGACG00000015258	tdrkh	94	65.000	Gasterosteus_aculeatus
ENSTNIG00000003157	tdrkh	99	67.027	ENSHBUG00000017609	tdrkh	99	67.027	Haplochromis_burtoni
ENSTNIG00000003157	tdrkh	100	57.117	ENSIPUG00000009673	tdrkh	100	57.117	Ictalurus_punctatus
ENSTNIG00000003157	tdrkh	99	67.442	ENSKMAG00000016638	tdrkh	93	67.325	Kryptolebias_marmoratus
ENSTNIG00000003157	tdrkh	99	69.176	ENSLBEG00000027323	tdrkh	97	69.176	Labrus_bergylta
ENSTNIG00000003157	tdrkh	97	50.730	ENSLOCG00000011381	tdrkh	97	50.730	Lepisosteus_oculatus
ENSTNIG00000003157	tdrkh	99	68.402	ENSMAMG00000020343	tdrkh	99	68.402	Mastacembelus_armatus
ENSTNIG00000003157	tdrkh	99	66.847	ENSMZEG00005006755	tdrkh	99	66.847	Maylandia_zebra
ENSTNIG00000003157	tdrkh	97	67.468	ENSMMOG00000020663	tdrkh	90	67.468	Mola_mola
ENSTNIG00000003157	tdrkh	99	67.621	ENSMALG00000015401	tdrkh	99	67.621	Monopterus_albus
ENSTNIG00000003157	tdrkh	99	64.324	ENSNBRG00000023815	tdrkh	99	64.324	Neolamprologus_brichardi
ENSTNIG00000003157	tdrkh	99	64.222	ENSORLG00000029204	tdrkh	99	64.222	Oryzias_latipes
ENSTNIG00000003157	tdrkh	96	62.756	ENSORLG00020016168	tdrkh	99	62.756	Oryzias_latipes_hni
ENSTNIG00000003157	tdrkh	97	62.226	ENSORLG00015014094	tdrkh	99	59.717	Oryzias_latipes_hsok
ENSTNIG00000003157	tdrkh	99	64.452	ENSOMEG00000015063	tdrkh	92	64.452	Oryzias_melastigma
ENSTNIG00000003157	tdrkh	99	56.483	ENSPKIG00000017597	tdrkh	99	56.483	Paramormyrops_kingsleyae
ENSTNIG00000003157	tdrkh	99	61.319	ENSPMGG00000019362	tdrkh	99	61.279	Periophthalmus_magnuspinnatus
ENSTNIG00000003157	tdrkh	99	65.350	ENSPFOG00000013032	tdrkh	94	65.350	Poecilia_formosa
ENSTNIG00000003157	tdrkh	99	65.171	ENSPLAG00000004193	tdrkh	99	65.171	Poecilia_latipinna
ENSTNIG00000003157	tdrkh	99	65.350	ENSPMEG00000016502	tdrkh	99	65.350	Poecilia_mexicana
ENSTNIG00000003157	tdrkh	99	64.452	ENSPREG00000004213	tdrkh	94	63.734	Poecilia_reticulata
ENSTNIG00000003157	tdrkh	97	66.171	ENSPNYG00000022818	tdrkh	97	66.171	Pundamilia_nyererei
ENSTNIG00000003157	tdrkh	100	57.345	ENSPNAG00000008783	tdrkh	94	57.345	Pygocentrus_nattereri
ENSTNIG00000003157	tdrkh	99	54.821	ENSSFOG00015001048	tdrkh	99	55.000	Scleropages_formosus
ENSTNIG00000003157	tdrkh	99	68.214	ENSSMAG00000001532	tdrkh	99	68.750	Scophthalmus_maximus
ENSTNIG00000003157	tdrkh	99	71.201	ENSSDUG00000013393	tdrkh	99	71.378	Seriola_dumerili
ENSTNIG00000003157	tdrkh	99	70.848	ENSSLDG00000017418	tdrkh	99	70.848	Seriola_lalandi_dorsalis
ENSTNIG00000003157	tdrkh	99	70.588	ENSSPAG00000006435	tdrkh	94	70.588	Stegastes_partitus
ENSTNIG00000003157	tdrkh	97	75.881	ENSTRUG00000006644	tdrkh	97	75.881	Takifugu_rubripes
ENSTNIG00000003157	tdrkh	81	75.926	ENSXCOG00000016972	tdrkh	98	75.926	Xiphophorus_couchianus
ENSTNIG00000003157	tdrkh	99	63.345	ENSXMAG00000014756	tdrkh	99	63.345	Xiphophorus_maculatus