EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000003166 (Gene tree)
Gene ID: -
Gene Symbol: matr3l1.1
Alias: matr3l|si:bz1d10.2|wu:fb78d04|wu:fc09f04|wu:fe36a04
Full Name: matrin 3-like 1.1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 5924 bases
Position: chrUn_random:37350410-37356333
Accession: ZDB-GENE-030616-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005742	RRM_1	PF00076.22	2.1e-10	1	1
ENSTNIP00000000261	RRM_1	PF00076.22	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000000038	-	1035	-	ENSTNIP00000000261	345 (aa)	-	H3BW99
ENSTNIT00000005890	-	2532	-	ENSTNIP00000005742	844 (aa)	-	H3CBX0

Gene Model

Click here to download ENSTNIG00000003166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003166's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSG00000015479	MATR3	98	36.667	Homo_sapiens
ENSTNIG00000003166	matr3l1.1	73	57.143	ENSAMEG00000011347	-	76	57.143	Ailuropoda_melanoleuca
ENSTNIG00000003166	matr3l1.1	84	61.224	ENSAPLG00000008118	-	75	61.224	Anas_platyrhynchos
ENSTNIG00000003166	matr3l1.1	93	40.000	ENSACAG00000016233	-	86	40.000	Anolis_carolinensis
ENSTNIG00000003166	matr3l1.1	72	56.863	ENSANAG00000022951	-	61	57.143	Aotus_nancymaae
ENSTNIG00000003166	matr3l1.1	58	32.919	ENSANAG00000024654	-	72	32.919	Aotus_nancymaae
ENSTNIG00000003166	matr3l1.1	99	58.217	ENSACLG00000015903	matr3l1.1	91	49.353	Astatotilapia_calliptera
ENSTNIG00000003166	matr3l1.1	98	48.969	ENSAMXG00000010681	matr3l1.1	84	47.872	Astyanax_mexicanus
ENSTNIG00000003166	matr3l1.1	98	48.223	ENSAMXG00000010685	matr3l1.1	84	48.223	Astyanax_mexicanus
ENSTNIG00000003166	matr3l1.1	80	39.665	ENSBTAG00000006756	MATR3	75	39.665	Bos_taurus
ENSTNIG00000003166	matr3l1.1	71	57.143	ENSCJAG00000006888	-	57	57.143	Callithrix_jacchus
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSCAFG00000001345	MATR3	61	57.143	Canis_familiaris
ENSTNIG00000003166	matr3l1.1	78	56.863	ENSCAFG00020010504	-	76	56.863	Canis_lupus_dingo
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSCHIG00000025746	-	61	57.143	Capra_hircus
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSTSYG00000011028	-	85	39.247	Carlito_syrichta
ENSTNIG00000003166	matr3l1.1	73	57.143	ENSCPOG00000014076	-	61	57.143	Cavia_porcellus
ENSTNIG00000003166	matr3l1.1	71	57.143	ENSCCAG00000025074	-	61	57.143	Cebus_capucinus
ENSTNIG00000003166	matr3l1.1	65	57.407	ENSCATG00000041304	-	78	39.459	Cercocebus_atys
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSCLAG00000015998	-	61	57.143	Chinchilla_lanigera
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSCSAG00000013075	-	61	57.143	Chlorocebus_sabaeus
ENSTNIG00000003166	matr3l1.1	87	50.725	ENSCPBG00000006303	-	77	50.725	Chrysemys_picta_bellii
ENSTNIG00000003166	matr3l1.1	73	57.143	ENSCANG00000028224	-	76	57.143	Colobus_angolensis_palliatus
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSCGRG00001020227	Matr3	79	39.247	Cricetulus_griseus_chok1gshd
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSCGRG00000011298	Matr3	61	57.143	Cricetulus_griseus_crigri
ENSTNIG00000003166	matr3l1.1	98	57.353	ENSCSEG00000012682	matr3l1.1	86	57.277	Cynoglossus_semilaevis
ENSTNIG00000003166	matr3l1.1	99	56.267	ENSCVAG00000005337	matr3l1.1	93	46.377	Cyprinodon_variegatus
ENSTNIG00000003166	matr3l1.1	85	59.184	ENSDNOG00000037723	-	76	59.184	Dasypus_novemcinctus
ENSTNIG00000003166	matr3l1.1	87	55.102	ENSEASG00005020857	-	61	55.102	Equus_asinus_asinus
ENSTNIG00000003166	matr3l1.1	87	55.102	ENSECAG00000012882	MATR3	61	55.102	Equus_caballus
ENSTNIG00000003166	matr3l1.1	100	48.108	ENSELUG00000021848	matr3l1.1	76	57.746	Esox_lucius
ENSTNIG00000003166	matr3l1.1	99	33.333	ENSELUG00000021651	si:ch211-271b14.1	65	30.640	Esox_lucius
ENSTNIG00000003166	matr3l1.1	73	57.143	ENSFCAG00000021911	-	61	57.143	Felis_catus
ENSTNIG00000003166	matr3l1.1	75	42.574	ENSFALG00000003071	-	79	44.318	Ficedula_albicollis
ENSTNIG00000003166	matr3l1.1	97	38.462	ENSFDAG00000017675	-	61	57.143	Fukomys_damarensis
ENSTNIG00000003166	matr3l1.1	87	50.725	ENSGALG00000002478	MATR3	77	50.725	Gallus_gallus
ENSTNIG00000003166	matr3l1.1	84	63.265	ENSGAGG00000011386	-	75	63.265	Gopherus_agassizii
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSGGOG00000007308	-	76	57.143	Gorilla_gorilla
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSHGLG00000004673	MATR3	61	57.143	Heterocephalus_glaber_female
ENSTNIG00000003166	matr3l1.1	65	57.407	ENSHGLG00100006442	-	86	39.247	Heterocephalus_glaber_male
ENSTNIG00000003166	matr3l1.1	88	73.913	ENSHCOG00000013223	matr3l1.1	71	75.926	Hippocampus_comes
ENSTNIG00000003166	matr3l1.1	62	45.283	ENSIPUG00000020686	MATR3	89	34.356	Ictalurus_punctatus
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSSTOG00000014746	-	61	57.143	Ictidomys_tridecemlineatus
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSJJAG00000021710	-	62	57.143	Jaculus_jaculus
ENSTNIG00000003166	matr3l1.1	100	63.559	ENSLBEG00000018267	matr3l1.1	83	71.622	Labrus_bergylta
ENSTNIG00000003166	matr3l1.1	89	59.184	ENSLACG00000006743	-	69	59.184	Latimeria_chalumnae
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSMFAG00000000634	-	76	57.143	Macaca_fascicularis
ENSTNIG00000003166	matr3l1.1	61	39.665	ENSMMUG00000015963	-	91	39.665	Macaca_mulatta
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSMMUG00000016741	MATR3	76	57.143	Macaca_mulatta
ENSTNIG00000003166	matr3l1.1	85	57.143	ENSMNEG00000042856	-	76	57.143	Macaca_nemestrina
ENSTNIG00000003166	matr3l1.1	85	57.143	ENSMLEG00000041178	-	76	57.143	Mandrillus_leucophaeus
ENSTNIG00000003166	matr3l1.1	57	76.923	ENSMAMG00000013840	matr3l1.1	86	66.507	Mastacembelus_armatus
ENSTNIG00000003166	matr3l1.1	87	50.725	ENSMGAG00000001331	-	77	50.725	Meleagris_gallopavo
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSMAUG00000011647	Matr3	61	57.143	Mesocricetus_auratus
ENSTNIG00000003166	matr3l1.1	67	58.000	ENSMICG00000012438	-	86	38.710	Microcebus_murinus
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSMOCG00000015711	Matr3	61	57.143	Microtus_ochrogaster
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSMODG00000011925	-	60	57.143	Monodelphis_domestica
ENSTNIG00000003166	matr3l1.1	88	57.143	MGP_CAROLIEiJ_G0022108	Matr3	86	39.247	Mus_caroli
ENSTNIG00000003166	matr3l1.1	88	57.143	ENSMUSG00000037236	Matr3	62	57.143	Mus_musculus
ENSTNIG00000003166	matr3l1.1	88	57.143	MGP_PahariEiJ_G0018842	Matr3	86	39.247	Mus_pahari
ENSTNIG00000003166	matr3l1.1	79	57.143	MGP_SPRETEiJ_G0023020	Matr3	86	39.247	Mus_spretus
ENSTNIG00000003166	matr3l1.1	73	57.143	ENSMPUG00000009297	-	59	57.143	Mustela_putorius_furo
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSMLUG00000005798	-	60	57.143	Myotis_lucifugus
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSNGAG00000017452	Matr3	61	57.143	Nannospalax_galili
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSNLEG00000009093	-	79	39.247	Nomascus_leucogenys
ENSTNIG00000003166	matr3l1.1	73	57.143	ENSOPRG00000016511	-	59	57.143	Ochotona_princeps
ENSTNIG00000003166	matr3l1.1	88	57.143	ENSODEG00000003015	-	62	57.143	Octodon_degus
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSOCUG00000026311	MATR3	61	57.143	Oryctolagus_cuniculus
ENSTNIG00000003166	matr3l1.1	99	54.960	ENSORLG00000025674	matr3l1.1	94	51.738	Oryzias_latipes
ENSTNIG00000003166	matr3l1.1	94	64.789	ENSORLG00020009362	matr3l1.1	93	52.392	Oryzias_latipes_hni
ENSTNIG00000003166	matr3l1.1	94	66.197	ENSORLG00015018551	matr3l1.1	94	49.033	Oryzias_latipes_hsok
ENSTNIG00000003166	matr3l1.1	97	55.866	ENSOMEG00000022287	matr3l1.1	87	56.938	Oryzias_melastigma
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSOGAG00000010607	-	61	57.143	Otolemur_garnettii
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSOARG00000016931	-	60	57.143	Ovis_aries
ENSTNIG00000003166	matr3l1.1	76	39.247	ENSPPAG00000026720	-	78	39.247	Pan_paniscus
ENSTNIG00000003166	matr3l1.1	85	57.143	ENSPPAG00000001418	-	76	57.143	Pan_paniscus
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSPPRG00000008004	-	61	57.143	Panthera_pardus
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSPTIG00000010711	-	63	57.143	Panthera_tigris_altaica
ENSTNIG00000003166	matr3l1.1	85	57.143	ENSPTRG00000017294	MATR3	76	57.143	Pan_troglodytes
ENSTNIG00000003166	matr3l1.1	76	38.710	ENSPANG00000032489	-	79	38.710	Papio_anubis
ENSTNIG00000003166	matr3l1.1	73	57.143	ENSPANG00000012018	-	76	57.143	Papio_anubis
ENSTNIG00000003166	matr3l1.1	98	46.939	ENSPKIG00000000333	matr3l1.1	86	51.220	Paramormyrops_kingsleyae
ENSTNIG00000003166	matr3l1.1	84	63.265	ENSPSIG00000014598	-	75	63.265	Pelodiscus_sinensis
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSPEMG00000020679	Matr3	61	57.143	Peromyscus_maniculatus_bairdii
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSPPYG00000015835	-	76	57.143	Pongo_abelii
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSPCOG00000025718	-	86	39.247	Propithecus_coquereli
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSPVAG00000015431	-	77	57.143	Pteropus_vampyrus
ENSTNIG00000003166	matr3l1.1	99	58.333	ENSPNYG00000015855	-	98	59.331	Pundamilia_nyererei
ENSTNIG00000003166	matr3l1.1	88	57.143	ENSRNOG00000019875	Matr3	62	57.143	Rattus_norvegicus
ENSTNIG00000003166	matr3l1.1	65	57.407	ENSRBIG00000034713	-	78	39.247	Rhinopithecus_bieti
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSRROG00000039415	-	75	57.143	Rhinopithecus_roxellana
ENSTNIG00000003166	matr3l1.1	74	57.143	ENSRROG00000043949	-	60	57.143	Rhinopithecus_roxellana
ENSTNIG00000003166	matr3l1.1	72	56.863	ENSSBOG00000030159	-	61	57.143	Saimiri_boliviensis_boliviensis
ENSTNIG00000003166	matr3l1.1	72	59.184	ENSSHAG00000010331	-	60	59.184	Sarcophilus_harrisii
ENSTNIG00000003166	matr3l1.1	84	44.848	ENSSFOG00015001838	-	76	44.848	Scleropages_formosus
ENSTNIG00000003166	matr3l1.1	97	59.944	ENSSDUG00000015369	matr3l1.1	86	64.115	Seriola_dumerili
ENSTNIG00000003166	matr3l1.1	71	53.333	ENSSPUG00000019236	-	59	52.857	Sphenodon_punctatus
ENSTNIG00000003166	matr3l1.1	72	57.143	ENSSSCG00000014343	-	61	57.143	Sus_scrofa
ENSTNIG00000003166	matr3l1.1	82	39.572	ENSTGUG00000014568	MATR3	60	42.697	Taeniopygia_guttata
ENSTNIG00000003166	matr3l1.1	57	95.960	ENSTRUG00000001692	-	68	80.866	Takifugu_rubripes
ENSTNIG00000003166	matr3l1.1	72	39.665	ENSUAMG00000000097	-	63	39.665	Ursus_americanus
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSUMAG00000015808	-	61	57.143	Ursus_maritimus
ENSTNIG00000003166	matr3l1.1	85	57.143	ENSVPAG00000006337	-	76	57.143	Vicugna_pacos
ENSTNIG00000003166	matr3l1.1	87	57.143	ENSVVUG00000020287	-	61	57.143	Vulpes_vulpes
ENSTNIG00000003166	matr3l1.1	90	56.000	ENSXETG00000003838	matr3	81	55.102	Xenopus_tropicalis
ENSTNIG00000003166	matr3l1.1	75	68.984	ENSXMAG00000014107	-	78	68.984	Xiphophorus_maculatus