EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000003208 (Gene tree)
Gene ID: -
Gene Symbol: casc3
Alias: -
Full Name: casc3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3983 bases
Position: chr3:15195552-15199534
Accession: ZDB-GENE-040308-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005788	Btz	PF09405.10	3.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005936	-	2013	-	ENSTNIP00000005788	670 (aa)	-	H3CC16

Gene Model

Click here to download ENSTNIG00000003208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003208	casc3	84	77.816	ENSAPOG00000008467	casc3	100	62.228	Acanthochromis_polyacanthus
ENSTNIG00000003208	casc3	79	67.877	ENSACIG00000000720	casc3	83	69.557	Amphilophus_citrinellus
ENSTNIG00000003208	casc3	88	82.192	ENSAOCG00000016676	casc3	91	71.990	Amphiprion_ocellaris
ENSTNIG00000003208	casc3	88	82.534	ENSAPEG00000006787	casc3	91	72.251	Amphiprion_percula
ENSTNIG00000003208	casc3	53	69.496	ENSATEG00000017196	casc3	100	63.892	Anabas_testudineus
ENSTNIG00000003208	casc3	91	46.401	ENSACAG00000002674	CASC3	87	46.547	Anolis_carolinensis
ENSTNIG00000003208	casc3	55	63.736	ENSANAG00000031954	-	84	63.889	Aotus_nancymaae
ENSTNIG00000003208	casc3	94	70.241	ENSACLG00000016198	casc3	100	63.212	Astatotilapia_calliptera
ENSTNIG00000003208	casc3	99	53.464	ENSAMXG00000032452	casc3	94	52.531	Astyanax_mexicanus
ENSTNIG00000003208	casc3	90	48.438	ENSTSYG00000002975	CASC3	88	48.754	Carlito_syrichta
ENSTNIG00000003208	casc3	99	46.049	ENSCLAG00000013730	CASC3	90	49.622	Chinchilla_lanigera
ENSTNIG00000003208	casc3	99	46.228	ENSCPBG00000004750	CASC3	94	47.253	Chrysemys_picta_bellii
ENSTNIG00000003208	casc3	95	69.272	ENSCSEG00000010047	casc3	91	68.229	Cynoglossus_semilaevis
ENSTNIG00000003208	casc3	53	68.802	ENSCVAG00000014935	casc3	100	63.012	Cyprinodon_variegatus
ENSTNIG00000003208	casc3	91	48.682	ENSDNOG00000017249	CASC3	86	48.834	Dasypus_novemcinctus
ENSTNIG00000003208	casc3	99	43.750	ENSETEG00000013720	CASC3	90	46.119	Echinops_telfairi
ENSTNIG00000003208	casc3	99	33.632	ENSEBUG00000010654	casc3	73	43.069	Eptatretus_burgeri
ENSTNIG00000003208	casc3	91	48.000	ENSFDAG00000020696	CASC3	96	48.777	Fukomys_damarensis
ENSTNIG00000003208	casc3	92	47.872	ENSGALG00000031813	CASC3	96	47.130	Gallus_gallus
ENSTNIG00000003208	casc3	92	69.180	ENSGAFG00000017148	casc3	86	61.458	Gambusia_affinis
ENSTNIG00000003208	casc3	53	68.865	ENSHBUG00000013155	casc3	100	63.731	Haplochromis_burtoni
ENSTNIG00000003208	casc3	99	46.658	ENSHGLG00000012117	CASC3	89	47.193	Heterocephalus_glaber_female
ENSTNIG00000003208	casc3	90	47.706	ENSHGLG00100002268	CASC3	99	46.225	Heterocephalus_glaber_male
ENSTNIG00000003208	casc3	100	58.000	ENSHCOG00000002664	casc3	95	57.483	Hippocampus_comes
ENSTNIG00000003208	casc3	100	59.744	ENSKMAG00000019507	casc3	100	61.932	Kryptolebias_marmoratus
ENSTNIG00000003208	casc3	65	68.783	ENSLBEG00000005435	casc3	89	68.542	Labrus_bergylta
ENSTNIG00000003208	casc3	99	41.208	ENSLACG00000013200	CASC3	68	51.295	Latimeria_chalumnae
ENSTNIG00000003208	casc3	74	62.661	ENSLOCG00000013518	casc3	68	62.661	Lepisosteus_oculatus
ENSTNIG00000003208	casc3	91	48.611	ENSLAFG00000000606	CASC3	89	47.866	Loxodonta_africana
ENSTNIG00000003208	casc3	53	67.989	ENSMAMG00000005235	casc3	96	61.148	Mastacembelus_armatus
ENSTNIG00000003208	casc3	94	70.241	ENSMZEG00005003815	casc3	100	63.212	Maylandia_zebra
ENSTNIG00000003208	casc3	88	45.794	ENSMGAG00000013247	CASC3	99	45.426	Meleagris_gallopavo
ENSTNIG00000003208	casc3	100	66.083	ENSMMOG00000014339	casc3	100	66.667	Mola_mola
ENSTNIG00000003208	casc3	99	46.685	ENSNGAG00000023121	Casc3	90	48.869	Nannospalax_galili
ENSTNIG00000003208	casc3	91	49.396	ENSODEG00000017858	CASC3	89	48.176	Octodon_degus
ENSTNIG00000003208	casc3	94	70.395	ENSONIG00000009337	casc3	100	68.097	Oreochromis_niloticus
ENSTNIG00000003208	casc3	90	47.352	ENSOCUG00000002954	CASC3	89	47.352	Oryctolagus_cuniculus
ENSTNIG00000003208	casc3	100	61.694	ENSORLG00000023125	casc3	100	61.282	Oryzias_latipes
ENSTNIG00000003208	casc3	63	76.136	ENSPFOG00000017632	casc3	100	65.318	Poecilia_formosa
ENSTNIG00000003208	casc3	91	71.552	ENSPLAG00000005268	casc3	100	63.355	Poecilia_latipinna
ENSTNIG00000003208	casc3	87	55.184	ENSPMEG00000010299	casc3	74	61.388	Poecilia_mexicana
ENSTNIG00000003208	casc3	88	73.171	ENSPREG00000011856	casc3	79	78.472	Poecilia_reticulata
ENSTNIG00000003208	casc3	53	70.241	ENSPNYG00000011962	casc3	100	63.342	Pundamilia_nyererei
ENSTNIG00000003208	casc3	52	69.399	ENSSMAG00000016096	casc3	100	60.674	Scophthalmus_maximus
ENSTNIG00000003208	casc3	100	63.780	ENSSDUG00000016893	casc3	95	66.317	Seriola_dumerili
ENSTNIG00000003208	casc3	80	77.397	ENSSLDG00000020308	casc3	95	75.403	Seriola_lalandi_dorsalis
ENSTNIG00000003208	casc3	58	59.341	ENSSARG00000010378	CASC3	65	63.014	Sorex_araneus
ENSTNIG00000003208	casc3	92	72.549	ENSSPAG00000023008	casc3	91	69.689	Stegastes_partitus
ENSTNIG00000003208	casc3	75	46.382	ENSTGUG00000002300	CASC3	99	46.533	Taeniopygia_guttata
ENSTNIG00000003208	casc3	56	79.016	ENSTRUG00000000673	casc3	100	72.259	Takifugu_rubripes
ENSTNIG00000003208	casc3	63	60.976	ENSTBEG00000017459	CASC3	54	62.439	Tupaia_belangeri
ENSTNIG00000003208	casc3	56	57.426	ENSTTRG00000016896	CASC3	66	67.606	Tursiops_truncatus
ENSTNIG00000003208	casc3	90	47.819	ENSUMAG00000017697	CASC3	98	47.508	Ursus_maritimus
ENSTNIG00000003208	casc3	90	45.227	ENSXETG00000024395	casc3	90	45.356	Xenopus_tropicalis
ENSTNIG00000003208	casc3	91	72.046	ENSXMAG00000013937	casc3	100	62.692	Xiphophorus_maculatus