EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000003235 (Gene tree)
Gene ID: -
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4190 bases
Position: chrUn_random:38911687-38915876
Accession: ZDB-GENE-040426-769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005817	U3_assoc_6	PF08640.11	4.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000005965	-	1785	-	ENSTNIP00000005817	594 (aa)	-	H3CC45

Gene Model

Click here to download ENSTNIG00000003235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003235	utp6	100	56.208	ENSG00000108651	UTP6	99	56.208	Homo_sapiens
ENSTNIG00000003235	utp6	100	83.165	ENSAPOG00000000435	utp6	99	83.165	Acanthochromis_polyacanthus
ENSTNIG00000003235	utp6	99	55.872	ENSAMEG00000005443	UTP6	99	55.872	Ailuropoda_melanoleuca
ENSTNIG00000003235	utp6	100	79.293	ENSACIG00000004124	utp6	99	79.293	Amphilophus_citrinellus
ENSTNIG00000003235	utp6	100	82.323	ENSAOCG00000016812	utp6	99	82.323	Amphiprion_ocellaris
ENSTNIG00000003235	utp6	100	82.323	ENSAPEG00000023565	utp6	99	82.323	Amphiprion_percula
ENSTNIG00000003235	utp6	100	82.828	ENSATEG00000003401	utp6	99	82.828	Anabas_testudineus
ENSTNIG00000003235	utp6	99	55.838	ENSAPLG00000005821	UTP6	98	55.838	Anas_platyrhynchos
ENSTNIG00000003235	utp6	100	57.047	ENSACAG00000009472	UTP6	99	57.047	Anolis_carolinensis
ENSTNIG00000003235	utp6	100	55.537	ENSANAG00000034603	UTP6	99	55.537	Aotus_nancymaae
ENSTNIG00000003235	utp6	100	82.492	ENSACLG00000006728	utp6	99	82.492	Astatotilapia_calliptera
ENSTNIG00000003235	utp6	100	69.192	ENSAMXG00000009478	utp6	99	69.192	Astyanax_mexicanus
ENSTNIG00000003235	utp6	99	53.859	ENSBTAG00000015612	UTP6	99	53.859	Bos_taurus
ENSTNIG00000003235	utp6	99	52.013	ENSBTAG00000003769	-	98	52.013	Bos_taurus
ENSTNIG00000003235	utp6	100	55.537	ENSCJAG00000014115	UTP6	99	55.537	Callithrix_jacchus
ENSTNIG00000003235	utp6	100	55.779	ENSCAFG00000018507	UTP6	99	55.779	Canis_familiaris
ENSTNIG00000003235	utp6	100	55.779	ENSCAFG00020014678	UTP6	99	55.779	Canis_lupus_dingo
ENSTNIG00000003235	utp6	99	54.027	ENSCHIG00000017954	-	99	54.027	Capra_hircus
ENSTNIG00000003235	utp6	99	54.027	ENSCHIG00000009726	-	99	54.027	Capra_hircus
ENSTNIG00000003235	utp6	100	50.754	ENSTSYG00000002202	UTP6	99	50.754	Carlito_syrichta
ENSTNIG00000003235	utp6	89	48.502	ENSCAPG00000017595	UTP6	97	48.689	Cavia_aperea
ENSTNIG00000003235	utp6	100	56.376	ENSCPOG00000014294	UTP6	100	56.376	Cavia_porcellus
ENSTNIG00000003235	utp6	100	51.846	ENSCCAG00000033318	-	99	51.846	Cebus_capucinus
ENSTNIG00000003235	utp6	100	55.779	ENSCATG00000034868	UTP6	99	55.779	Cercocebus_atys
ENSTNIG00000003235	utp6	100	56.040	ENSCLAG00000007274	UTP6	99	56.040	Chinchilla_lanigera
ENSTNIG00000003235	utp6	100	55.276	ENSCSAG00000006595	UTP6	99	55.276	Chlorocebus_sabaeus
ENSTNIG00000003235	utp6	73	45.290	ENSCHOG00000010940	-	73	45.290	Choloepus_hoffmanni
ENSTNIG00000003235	utp6	100	58.725	ENSCPBG00000004652	UTP6	99	58.725	Chrysemys_picta_bellii
ENSTNIG00000003235	utp6	99	30.556	ENSCING00000022947	-	99	30.456	Ciona_intestinalis
ENSTNIG00000003235	utp6	54	36.086	ENSCSAVG00000011416	-	99	36.086	Ciona_savignyi
ENSTNIG00000003235	utp6	88	39.313	ENSCANG00000031141	UTP6	89	39.313	Colobus_angolensis_palliatus
ENSTNIG00000003235	utp6	100	55.276	ENSCGRG00001000046	Utp6	100	55.276	Cricetulus_griseus_chok1gshd
ENSTNIG00000003235	utp6	95	53.887	ENSCGRG00000011543	Utp6	100	53.887	Cricetulus_griseus_crigri
ENSTNIG00000003235	utp6	100	72.605	ENSCSEG00000013422	utp6	99	91.429	Cynoglossus_semilaevis
ENSTNIG00000003235	utp6	100	80.135	ENSCVAG00000020322	utp6	99	80.135	Cyprinodon_variegatus
ENSTNIG00000003235	utp6	100	67.508	ENSDARG00000098433	utp6	100	76.243	Danio_rerio
ENSTNIG00000003235	utp6	100	55.444	ENSDNOG00000037018	UTP6	99	55.444	Dasypus_novemcinctus
ENSTNIG00000003235	utp6	95	53.982	ENSDORG00000003843	Utp6	99	56.066	Dipodomys_ordii
ENSTNIG00000003235	utp6	100	56.449	ENSEASG00005010870	UTP6	99	56.449	Equus_asinus_asinus
ENSTNIG00000003235	utp6	100	56.449	ENSECAG00000022217	UTP6	99	56.449	Equus_caballus
ENSTNIG00000003235	utp6	100	72.054	ENSELUG00000006618	utp6	99	72.054	Esox_lucius
ENSTNIG00000003235	utp6	100	54.257	ENSFCAG00000015795	UTP6	99	54.257	Felis_catus
ENSTNIG00000003235	utp6	100	57.886	ENSFALG00000002282	UTP6	99	57.886	Ficedula_albicollis
ENSTNIG00000003235	utp6	100	55.705	ENSFDAG00000019506	UTP6	100	55.705	Fukomys_damarensis
ENSTNIG00000003235	utp6	100	78.788	ENSFHEG00000010373	utp6	99	78.788	Fundulus_heteroclitus
ENSTNIG00000003235	utp6	100	71.717	ENSGMOG00000011958	utp6	99	71.717	Gadus_morhua
ENSTNIG00000003235	utp6	100	57.718	ENSGALG00000003260	UTP6	99	57.718	Gallus_gallus
ENSTNIG00000003235	utp6	100	80.976	ENSGAFG00000008505	utp6	99	80.976	Gambusia_affinis
ENSTNIG00000003235	utp6	100	81.481	ENSGACG00000019424	utp6	99	81.481	Gasterosteus_aculeatus
ENSTNIG00000003235	utp6	100	58.221	ENSGAGG00000004820	UTP6	99	58.221	Gopherus_agassizii
ENSTNIG00000003235	utp6	100	56.544	ENSGGOG00000013569	UTP6	99	56.544	Gorilla_gorilla
ENSTNIG00000003235	utp6	99	45.286	ENSGGOG00000026003	-	99	45.286	Gorilla_gorilla
ENSTNIG00000003235	utp6	100	82.492	ENSHBUG00000018668	utp6	99	82.492	Haplochromis_burtoni
ENSTNIG00000003235	utp6	100	55.705	ENSHGLG00000010332	UTP6	100	55.705	Heterocephalus_glaber_female
ENSTNIG00000003235	utp6	99	51.265	ENSHGLG00000008642	-	99	51.265	Heterocephalus_glaber_female
ENSTNIG00000003235	utp6	95	52.289	ENSHGLG00100006047	-	99	52.289	Heterocephalus_glaber_male
ENSTNIG00000003235	utp6	100	52.852	ENSHGLG00100014271	-	100	52.852	Heterocephalus_glaber_male
ENSTNIG00000003235	utp6	100	74.579	ENSHCOG00000017277	utp6	99	74.579	Hippocampus_comes
ENSTNIG00000003235	utp6	100	67.340	ENSIPUG00000022587	Utp6	99	67.340	Ictalurus_punctatus
ENSTNIG00000003235	utp6	100	56.689	ENSSTOG00000015875	UTP6	100	56.689	Ictidomys_tridecemlineatus
ENSTNIG00000003235	utp6	100	81.650	ENSKMAG00000021631	utp6	99	81.650	Kryptolebias_marmoratus
ENSTNIG00000003235	utp6	100	82.828	ENSLBEG00000002115	utp6	99	82.828	Labrus_bergylta
ENSTNIG00000003235	utp6	100	60.570	ENSLACG00000017158	UTP6	99	60.570	Latimeria_chalumnae
ENSTNIG00000003235	utp6	92	64.220	ENSLOCG00000013797	utp6	90	64.220	Lepisosteus_oculatus
ENSTNIG00000003235	utp6	100	55.611	ENSLAFG00000013008	UTP6	99	55.611	Loxodonta_africana
ENSTNIG00000003235	utp6	100	55.779	ENSMFAG00000038842	UTP6	99	55.779	Macaca_fascicularis
ENSTNIG00000003235	utp6	87	46.254	ENSMFAG00000041904	-	94	46.254	Macaca_fascicularis
ENSTNIG00000003235	utp6	100	55.779	ENSMMUG00000020403	UTP6	99	55.779	Macaca_mulatta
ENSTNIG00000003235	utp6	100	55.779	ENSMNEG00000039480	UTP6	99	55.779	Macaca_nemestrina
ENSTNIG00000003235	utp6	99	44.128	ENSMLEG00000039364	-	99	43.960	Mandrillus_leucophaeus
ENSTNIG00000003235	utp6	100	49.916	ENSMLEG00000032174	UTP6	99	49.916	Mandrillus_leucophaeus
ENSTNIG00000003235	utp6	100	82.492	ENSMAMG00000002228	utp6	99	82.492	Mastacembelus_armatus
ENSTNIG00000003235	utp6	100	82.492	ENSMZEG00005023895	utp6	99	82.492	Maylandia_zebra
ENSTNIG00000003235	utp6	95	55.908	ENSMGAG00000008111	UTP6	99	55.908	Meleagris_gallopavo
ENSTNIG00000003235	utp6	100	55.109	ENSMAUG00000021895	Utp6	100	55.109	Mesocricetus_auratus
ENSTNIG00000003235	utp6	100	54.271	ENSMICG00000002632	UTP6	99	54.181	Microcebus_murinus
ENSTNIG00000003235	utp6	100	54.941	ENSMOCG00000014163	Utp6	100	54.941	Microtus_ochrogaster
ENSTNIG00000003235	utp6	100	80.976	ENSMMOG00000008653	utp6	99	91.429	Mola_mola
ENSTNIG00000003235	utp6	99	56.208	ENSMODG00000019206	UTP6	99	56.208	Monodelphis_domestica
ENSTNIG00000003235	utp6	100	82.155	ENSMALG00000021112	utp6	99	82.155	Monopterus_albus
ENSTNIG00000003235	utp6	100	55.109	MGP_CAROLIEiJ_G0016828	Utp6	100	55.109	Mus_caroli
ENSTNIG00000003235	utp6	100	55.276	ENSMUSG00000035575	Utp6	100	55.276	Mus_musculus
ENSTNIG00000003235	utp6	100	51.591	MGP_PahariEiJ_G0017965	Utp6	100	51.591	Mus_pahari
ENSTNIG00000003235	utp6	100	54.774	MGP_SPRETEiJ_G0017672	Utp6	100	54.774	Mus_spretus
ENSTNIG00000003235	utp6	100	55.369	ENSMPUG00000014581	UTP6	99	55.369	Mustela_putorius_furo
ENSTNIG00000003235	utp6	100	55.611	ENSMLUG00000016422	UTP6	99	55.611	Myotis_lucifugus
ENSTNIG00000003235	utp6	100	55.686	ENSNGAG00000015482	Utp6	100	55.686	Nannospalax_galili
ENSTNIG00000003235	utp6	100	82.828	ENSNBRG00000019714	utp6	99	82.828	Neolamprologus_brichardi
ENSTNIG00000003235	utp6	100	55.537	ENSNLEG00000011009	UTP6	99	55.537	Nomascus_leucogenys
ENSTNIG00000003235	utp6	89	57.447	ENSOPRG00000008446	-	89	57.447	Ochotona_princeps
ENSTNIG00000003235	utp6	66	61.181	ENSODEG00000011971	UTP6	98	61.181	Octodon_degus
ENSTNIG00000003235	utp6	100	82.492	ENSONIG00000018090	utp6	99	82.492	Oreochromis_niloticus
ENSTNIG00000003235	utp6	98	55.196	ENSOANG00000004279	UTP6	99	55.196	Ornithorhynchus_anatinus
ENSTNIG00000003235	utp6	100	54.774	ENSOCUG00000016980	UTP6	99	54.774	Oryctolagus_cuniculus
ENSTNIG00000003235	utp6	100	78.451	ENSORLG00000003546	utp6	64	78.451	Oryzias_latipes
ENSTNIG00000003235	utp6	100	78.451	ENSORLG00020010377	utp6	99	78.451	Oryzias_latipes_hni
ENSTNIG00000003235	utp6	100	78.114	ENSORLG00015008893	utp6	99	78.114	Oryzias_latipes_hsok
ENSTNIG00000003235	utp6	100	78.451	ENSOMEG00000017487	utp6	99	78.451	Oryzias_melastigma
ENSTNIG00000003235	utp6	88	48.952	ENSOGAG00000004511	UTP6	100	48.566	Otolemur_garnettii
ENSTNIG00000003235	utp6	99	54.195	ENSOARG00000013474	UTP6	99	54.195	Ovis_aries
ENSTNIG00000003235	utp6	100	56.376	ENSPPAG00000038089	UTP6	99	56.376	Pan_paniscus
ENSTNIG00000003235	utp6	99	46.633	ENSPPAG00000016895	-	99	46.633	Pan_paniscus
ENSTNIG00000003235	utp6	100	56.187	ENSPPRG00000001010	UTP6	99	56.187	Panthera_pardus
ENSTNIG00000003235	utp6	100	56.187	ENSPTIG00000013913	UTP6	99	56.187	Panthera_tigris_altaica
ENSTNIG00000003235	utp6	100	56.376	ENSPTRG00000008977	UTP6	99	56.376	Pan_troglodytes
ENSTNIG00000003235	utp6	99	46.633	ENSPTRG00000044798	-	99	46.633	Pan_troglodytes
ENSTNIG00000003235	utp6	99	44.034	ENSPANG00000034274	-	99	43.866	Papio_anubis
ENSTNIG00000003235	utp6	100	53.846	ENSPANG00000023113	UTP6	99	53.846	Papio_anubis
ENSTNIG00000003235	utp6	100	68.007	ENSPKIG00000004653	utp6	99	68.007	Paramormyrops_kingsleyae
ENSTNIG00000003235	utp6	100	58.151	ENSPSIG00000012435	UTP6	99	58.151	Pelodiscus_sinensis
ENSTNIG00000003235	utp6	100	78.788	ENSPMGG00000009548	utp6	99	78.788	Periophthalmus_magnuspinnatus
ENSTNIG00000003235	utp6	100	55.017	ENSPEMG00000014081	Utp6	100	55.017	Peromyscus_maniculatus_bairdii
ENSTNIG00000003235	utp6	93	44.583	ENSPMAG00000009561	utp6	99	44.583	Petromyzon_marinus
ENSTNIG00000003235	utp6	100	58.725	ENSPCIG00000029968	UTP6	86	58.725	Phascolarctos_cinereus
ENSTNIG00000003235	utp6	100	80.303	ENSPFOG00000013918	utp6	99	80.303	Poecilia_formosa
ENSTNIG00000003235	utp6	100	80.135	ENSPLAG00000017825	utp6	99	80.135	Poecilia_latipinna
ENSTNIG00000003235	utp6	100	80.471	ENSPMEG00000008133	utp6	99	80.471	Poecilia_mexicana
ENSTNIG00000003235	utp6	100	77.778	ENSPREG00000013108	utp6	99	77.778	Poecilia_reticulata
ENSTNIG00000003235	utp6	100	53.859	ENSPPYG00000008154	UTP6	99	53.859	Pongo_abelii
ENSTNIG00000003235	utp6	100	54.515	ENSPCOG00000010224	UTP6	99	54.515	Propithecus_coquereli
ENSTNIG00000003235	utp6	100	52.174	ENSPVAG00000015759	UTP6	99	52.174	Pteropus_vampyrus
ENSTNIG00000003235	utp6	100	82.155	ENSPNYG00000002290	utp6	99	82.155	Pundamilia_nyererei
ENSTNIG00000003235	utp6	100	65.993	ENSPNAG00000027370	utp6	99	65.993	Pygocentrus_nattereri
ENSTNIG00000003235	utp6	100	54.774	ENSRNOG00000014209	Utp6	100	54.774	Rattus_norvegicus
ENSTNIG00000003235	utp6	100	55.611	ENSRBIG00000020822	UTP6	99	55.611	Rhinopithecus_bieti
ENSTNIG00000003235	utp6	100	55.611	ENSRROG00000036838	UTP6	99	55.611	Rhinopithecus_roxellana
ENSTNIG00000003235	utp6	100	67.002	ENSSFOG00015005978	utp6	99	67.002	Scleropages_formosus
ENSTNIG00000003235	utp6	100	83.333	ENSSMAG00000014772	utp6	99	83.333	Scophthalmus_maximus
ENSTNIG00000003235	utp6	100	84.343	ENSSDUG00000000329	utp6	99	84.343	Seriola_dumerili
ENSTNIG00000003235	utp6	100	83.165	ENSSLDG00000016724	utp6	99	83.165	Seriola_lalandi_dorsalis
ENSTNIG00000003235	utp6	99	48.993	ENSSARG00000010778	UTP6	99	48.993	Sorex_araneus
ENSTNIG00000003235	utp6	100	57.886	ENSSPUG00000005273	UTP6	99	57.886	Sphenodon_punctatus
ENSTNIG00000003235	utp6	100	80.808	ENSSPAG00000011871	utp6	99	80.808	Stegastes_partitus
ENSTNIG00000003235	utp6	100	56.522	ENSSSCG00000017745	UTP6	99	56.593	Sus_scrofa
ENSTNIG00000003235	utp6	100	57.621	ENSTGUG00000004999	UTP6	99	57.621	Taeniopygia_guttata
ENSTNIG00000003235	utp6	100	88.047	ENSTRUG00000012005	utp6	100	88.047	Takifugu_rubripes
ENSTNIG00000003235	utp6	68	58.011	ENSTBEG00000005388	-	64	58.011	Tupaia_belangeri
ENSTNIG00000003235	utp6	100	55.946	ENSTTRG00000009911	UTP6	99	55.946	Tursiops_truncatus
ENSTNIG00000003235	utp6	99	55.537	ENSUMAG00000015139	UTP6	99	55.537	Ursus_maritimus
ENSTNIG00000003235	utp6	100	55.779	ENSVPAG00000005782	UTP6	99	55.779	Vicugna_pacos
ENSTNIG00000003235	utp6	100	55.946	ENSVVUG00000012238	UTP6	99	55.946	Vulpes_vulpes
ENSTNIG00000003235	utp6	99	50.252	ENSXETG00000020057	utp6	99	50.252	Xenopus_tropicalis
ENSTNIG00000003235	utp6	100	79.195	ENSXCOG00000013626	utp6	99	82.432	Xiphophorus_couchianus
ENSTNIG00000003235	utp6	100	79.293	ENSXMAG00000017414	utp6	99	79.293	Xiphophorus_maculatus