EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000003270 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2876 bases
Position: chr18:11004353-11007228
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005853	FAM83	PF07894.12	4.7e-97	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006001	-	828	-	ENSTNIP00000005853	276 (aa)	-	Q4T968

Gene Model

Click here to download ENSTNIG00000003270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000003270	-	93	37.643	ENSTNIG00000002833	fam83c	73	37.643
ENSTNIG00000003270	-	95	46.970	ENSTNIG00000013100	-	93	46.970
ENSTNIG00000003270	-	80	33.480	ENSTNIG00000014784	-	88	33.480
ENSTNIG00000003270	-	63	39.205	ENSTNIG00000011260	fam83fa	58	39.205
ENSTNIG00000003270	-	86	33.750	ENSTNIG00000011604	-	94	33.750
ENSTNIG00000003270	-	93	37.594	ENSTNIG00000007315	fam83d	97	37.594
ENSTNIG00000003270	-	92	39.623	ENSTNIG00000018819	fam83fb	68	39.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003270	-	51	76.596	ENSACIG00000011420	-	79	76.596	Amphilophus_citrinellus
ENSTNIG00000003270	-	100	69.203	ENSAPEG00000010819	-	58	69.203	Amphiprion_percula
ENSTNIG00000003270	-	100	64.130	ENSATEG00000021763	-	77	64.130	Anabas_testudineus
ENSTNIG00000003270	-	93	42.593	ENSEBUG00000000653	-	50	42.593	Eptatretus_burgeri
ENSTNIG00000003270	-	100	56.184	ENSGMOG00000005524	fam83b	92	56.604	Gadus_morhua
ENSTNIG00000003270	-	100	72.202	ENSGMOG00000007616	-	98	72.202	Gadus_morhua
ENSTNIG00000003270	-	54	73.856	ENSLBEG00000000635	-	75	73.856	Labrus_bergylta
ENSTNIG00000003270	-	62	68.824	ENSMALG00000002650	-	79	68.824	Monopterus_albus
ENSTNIG00000003270	-	99	73.091	ENSNBRG00000004865	-	59	73.091	Neolamprologus_brichardi
ENSTNIG00000003270	-	67	73.370	ENSONIG00000000158	-	100	73.370	Oreochromis_niloticus
ENSTNIG00000003270	-	71	54.412	ENSONIG00000009720	-	97	54.412	Oreochromis_niloticus
ENSTNIG00000003270	-	97	68.889	ENSOMEG00000010956	-	74	68.478	Oryzias_melastigma
ENSTNIG00000003270	-	97	60.448	ENSPLAG00000023353	-	54	60.448	Poecilia_latipinna
ENSTNIG00000003270	-	100	61.957	ENSPREG00000021538	-	61	61.957	Poecilia_reticulata