EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000003347 (Gene tree)
Gene ID: -
Gene Symbol: tnpo3
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 6873 bases
Position: chrUn_random:23016626-23023498
Accession: ZDB-GENE-040426-708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000005933	Xpo1	PF08389.12	1.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006081	-	2781	-	ENSTNIP00000005933	926 (aa)	-	H3CCG1

Gene Model

Click here to download ENSTNIG00000003347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003347's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003347	tnpo3	100	84.125	ENSG00000064419	TNPO3	100	84.125	Homo_sapiens
ENSTNIG00000003347	tnpo3	100	94.924	ENSAPOG00000018347	tnpo3	100	94.924	Acanthochromis_polyacanthus
ENSTNIG00000003347	tnpo3	99	81.047	ENSAMEG00000005135	TNPO3	98	81.047	Ailuropoda_melanoleuca
ENSTNIG00000003347	tnpo3	96	90.482	ENSACIG00000005897	tnpo3	100	90.482	Amphilophus_citrinellus
ENSTNIG00000003347	tnpo3	100	95.140	ENSAOCG00000008264	tnpo3	100	95.140	Amphiprion_ocellaris
ENSTNIG00000003347	tnpo3	96	95.034	ENSAPEG00000024300	tnpo3	100	95.034	Amphiprion_percula
ENSTNIG00000003347	tnpo3	100	94.276	ENSATEG00000003197	tnpo3	100	94.276	Anabas_testudineus
ENSTNIG00000003347	tnpo3	71	81.803	ENSAPLG00000005946	TNPO3	91	81.803	Anas_platyrhynchos
ENSTNIG00000003347	tnpo3	82	83.879	ENSACAG00000013470	TNPO3	95	83.879	Anolis_carolinensis
ENSTNIG00000003347	tnpo3	100	84.125	ENSANAG00000037940	TNPO3	100	84.125	Aotus_nancymaae
ENSTNIG00000003347	tnpo3	100	93.197	ENSACLG00000005561	tnpo3	100	93.197	Astatotilapia_calliptera
ENSTNIG00000003347	tnpo3	100	91.577	ENSAMXG00000016236	tnpo3	100	91.577	Astyanax_mexicanus
ENSTNIG00000003347	tnpo3	100	84.449	ENSBTAG00000004992	TNPO3	100	84.449	Bos_taurus
ENSTNIG00000003347	tnpo3	100	84.233	ENSCJAG00000018085	TNPO3	100	84.233	Callithrix_jacchus
ENSTNIG00000003347	tnpo3	100	84.125	ENSCAFG00000001543	TNPO3	100	84.125	Canis_familiaris
ENSTNIG00000003347	tnpo3	100	84.125	ENSCAFG00020022462	TNPO3	99	83.728	Canis_lupus_dingo
ENSTNIG00000003347	tnpo3	100	84.341	ENSCHIG00000011721	TNPO3	100	84.341	Capra_hircus
ENSTNIG00000003347	tnpo3	100	84.233	ENSTSYG00000002989	TNPO3	100	84.233	Carlito_syrichta
ENSTNIG00000003347	tnpo3	72	83.871	ENSCAPG00000005843	TNPO3	91	83.871	Cavia_aperea
ENSTNIG00000003347	tnpo3	100	83.585	ENSCPOG00000039784	TNPO3	100	83.585	Cavia_porcellus
ENSTNIG00000003347	tnpo3	100	84.233	ENSCCAG00000033826	TNPO3	100	84.233	Cebus_capucinus
ENSTNIG00000003347	tnpo3	100	84.125	ENSCATG00000030018	TNPO3	100	84.125	Cercocebus_atys
ENSTNIG00000003347	tnpo3	100	83.011	ENSCLAG00000016298	TNPO3	100	83.011	Chinchilla_lanigera
ENSTNIG00000003347	tnpo3	100	84.233	ENSCSAG00000009966	TNPO3	100	84.233	Chlorocebus_sabaeus
ENSTNIG00000003347	tnpo3	99	59.958	ENSCHOG00000011547	TNPO3	99	59.958	Choloepus_hoffmanni
ENSTNIG00000003347	tnpo3	93	83.140	ENSCPBG00000017497	TNPO3	100	83.140	Chrysemys_picta_bellii
ENSTNIG00000003347	tnpo3	99	48.317	ENSCING00000005042	-	99	48.317	Ciona_intestinalis
ENSTNIG00000003347	tnpo3	99	46.957	ENSCSAVG00000008623	-	94	54.182	Ciona_savignyi
ENSTNIG00000003347	tnpo3	100	84.125	ENSCANG00000033070	TNPO3	100	84.125	Colobus_angolensis_palliatus
ENSTNIG00000003347	tnpo3	100	83.909	ENSCGRG00001015925	Tnpo3	100	83.909	Cricetulus_griseus_chok1gshd
ENSTNIG00000003347	tnpo3	100	83.909	ENSCGRG00000010379	Tnpo3	100	83.909	Cricetulus_griseus_crigri
ENSTNIG00000003347	tnpo3	100	92.657	ENSCSEG00000005952	tnpo3	100	92.657	Cynoglossus_semilaevis
ENSTNIG00000003347	tnpo3	100	91.685	ENSCVAG00000020285	tnpo3	100	91.685	Cyprinodon_variegatus
ENSTNIG00000003347	tnpo3	100	89.309	ENSDARG00000045680	tnpo3	100	89.309	Danio_rerio
ENSTNIG00000003347	tnpo3	100	84.017	ENSDNOG00000002556	TNPO3	100	84.017	Dasypus_novemcinctus
ENSTNIG00000003347	tnpo3	62	84.111	ENSDORG00000002433	Tnpo3	95	84.111	Dipodomys_ordii
ENSTNIG00000003347	tnpo3	99	43.133	FBgn0031456	Tnpo-SR	99	43.133	Drosophila_melanogaster
ENSTNIG00000003347	tnpo3	95	85.055	ENSETEG00000002101	TNPO3	90	85.055	Echinops_telfairi
ENSTNIG00000003347	tnpo3	99	69.772	ENSEBUG00000016931	tnpo3	99	69.772	Eptatretus_burgeri
ENSTNIG00000003347	tnpo3	100	84.017	ENSEASG00005008677	TNPO3	100	84.017	Equus_asinus_asinus
ENSTNIG00000003347	tnpo3	100	84.017	ENSECAG00000012815	TNPO3	100	84.017	Equus_caballus
ENSTNIG00000003347	tnpo3	99	78.791	ENSEEUG00000005178	TNPO3	98	78.791	Erinaceus_europaeus
ENSTNIG00000003347	tnpo3	60	33.175	ENSEEUG00000011681	IPO13	72	33.175	Erinaceus_europaeus
ENSTNIG00000003347	tnpo3	99	92.408	ENSELUG00000012153	tnpo3	99	92.408	Esox_lucius
ENSTNIG00000003347	tnpo3	100	84.125	ENSFCAG00000018186	TNPO3	100	84.125	Felis_catus
ENSTNIG00000003347	tnpo3	96	79.444	ENSFALG00000010667	TNPO3	100	79.444	Ficedula_albicollis
ENSTNIG00000003347	tnpo3	100	83.513	ENSFDAG00000019578	TNPO3	100	83.513	Fukomys_damarensis
ENSTNIG00000003347	tnpo3	99	91.658	ENSFHEG00000012859	tnpo3	99	91.658	Fundulus_heteroclitus
ENSTNIG00000003347	tnpo3	100	91.685	ENSGMOG00000007324	tnpo3	100	91.685	Gadus_morhua
ENSTNIG00000003347	tnpo3	61	83.392	ENSGALG00000039420	TNPO3	99	83.392	Gallus_gallus
ENSTNIG00000003347	tnpo3	100	94.168	ENSGACG00000000699	tnpo3	100	94.168	Gasterosteus_aculeatus
ENSTNIG00000003347	tnpo3	93	83.023	ENSGAGG00000006777	TNPO3	100	83.023	Gopherus_agassizii
ENSTNIG00000003347	tnpo3	100	84.125	ENSGGOG00000008339	TNPO3	100	84.125	Gorilla_gorilla
ENSTNIG00000003347	tnpo3	100	93.197	ENSHBUG00000008351	tnpo3	100	93.197	Haplochromis_burtoni
ENSTNIG00000003347	tnpo3	100	84.017	ENSHGLG00000004463	TNPO3	100	84.017	Heterocephalus_glaber_female
ENSTNIG00000003347	tnpo3	100	84.017	ENSHGLG00100005509	TNPO3	100	84.017	Heterocephalus_glaber_male
ENSTNIG00000003347	tnpo3	100	91.253	ENSHCOG00000007221	tnpo3	100	91.253	Hippocampus_comes
ENSTNIG00000003347	tnpo3	100	89.417	ENSIPUG00000014979	TNPO3	99	89.417	Ictalurus_punctatus
ENSTNIG00000003347	tnpo3	100	84.017	ENSSTOG00000004885	TNPO3	100	84.017	Ictidomys_tridecemlineatus
ENSTNIG00000003347	tnpo3	100	78.149	ENSJJAG00000013530	Tnpo3	100	78.149	Jaculus_jaculus
ENSTNIG00000003347	tnpo3	100	92.225	ENSKMAG00000010497	tnpo3	100	92.225	Kryptolebias_marmoratus
ENSTNIG00000003347	tnpo3	96	89.391	ENSLBEG00000011988	-	99	89.391	Labrus_bergylta
ENSTNIG00000003347	tnpo3	96	91.309	ENSLBEG00000016595	tnpo3	100	91.309	Labrus_bergylta
ENSTNIG00000003347	tnpo3	83	86.413	ENSLACG00000002351	TNPO3	99	86.413	Latimeria_chalumnae
ENSTNIG00000003347	tnpo3	100	89.741	ENSLOCG00000015556	tnpo3	100	89.741	Lepisosteus_oculatus
ENSTNIG00000003347	tnpo3	100	83.441	ENSLAFG00000002738	TNPO3	100	83.441	Loxodonta_africana
ENSTNIG00000003347	tnpo3	100	84.125	ENSMFAG00000032385	TNPO3	100	84.125	Macaca_fascicularis
ENSTNIG00000003347	tnpo3	100	84.125	ENSMMUG00000004311	TNPO3	100	84.125	Macaca_mulatta
ENSTNIG00000003347	tnpo3	100	84.125	ENSMNEG00000045277	TNPO3	100	84.125	Macaca_nemestrina
ENSTNIG00000003347	tnpo3	100	84.125	ENSMLEG00000037881	TNPO3	100	84.125	Mandrillus_leucophaeus
ENSTNIG00000003347	tnpo3	100	94.276	ENSMAMG00000021096	tnpo3	100	94.276	Mastacembelus_armatus
ENSTNIG00000003347	tnpo3	100	93.197	ENSMZEG00005015084	tnpo3	100	93.197	Maylandia_zebra
ENSTNIG00000003347	tnpo3	78	79.668	ENSMGAG00000002839	TNPO3	99	79.668	Meleagris_gallopavo
ENSTNIG00000003347	tnpo3	100	84.017	ENSMAUG00000013463	Tnpo3	100	84.017	Mesocricetus_auratus
ENSTNIG00000003347	tnpo3	86	32.812	ENSMICG00000011003	IPO13	97	32.544	Microcebus_murinus
ENSTNIG00000003347	tnpo3	100	84.125	ENSMICG00000000140	TNPO3	100	84.125	Microcebus_murinus
ENSTNIG00000003347	tnpo3	100	83.909	ENSMOCG00000013264	Tnpo3	100	83.909	Microtus_ochrogaster
ENSTNIG00000003347	tnpo3	100	93.629	ENSMMOG00000005887	tnpo3	100	93.629	Mola_mola
ENSTNIG00000003347	tnpo3	100	84.557	ENSMODG00000014700	TNPO3	100	84.557	Monodelphis_domestica
ENSTNIG00000003347	tnpo3	100	93.629	ENSMALG00000006675	tnpo3	100	93.629	Monopterus_albus
ENSTNIG00000003347	tnpo3	100	83.801	MGP_CAROLIEiJ_G0028176	Tnpo3	100	83.801	Mus_caroli
ENSTNIG00000003347	tnpo3	100	83.801	ENSMUSG00000012535	Tnpo3	100	83.801	Mus_musculus
ENSTNIG00000003347	tnpo3	100	83.801	MGP_PahariEiJ_G0021934	Tnpo3	100	83.801	Mus_pahari
ENSTNIG00000003347	tnpo3	100	83.693	MGP_SPRETEiJ_G0029176	Tnpo3	100	83.693	Mus_spretus
ENSTNIG00000003347	tnpo3	100	84.125	ENSMPUG00000006021	TNPO3	100	84.125	Mustela_putorius_furo
ENSTNIG00000003347	tnpo3	100	75.810	ENSMLUG00000000947	TNPO3	100	75.810	Myotis_lucifugus
ENSTNIG00000003347	tnpo3	100	84.017	ENSNGAG00000008722	Tnpo3	100	84.017	Nannospalax_galili
ENSTNIG00000003347	tnpo3	100	91.685	ENSNBRG00000019001	tnpo3	100	93.034	Neolamprologus_brichardi
ENSTNIG00000003347	tnpo3	100	81.042	ENSNLEG00000012491	TNPO3	100	81.042	Nomascus_leucogenys
ENSTNIG00000003347	tnpo3	92	69.970	ENSMEUG00000002445	TNPO3	91	69.970	Notamacropus_eugenii
ENSTNIG00000003347	tnpo3	91	85.870	ENSOPRG00000006163	TNPO3	90	85.870	Ochotona_princeps
ENSTNIG00000003347	tnpo3	98	83.536	ENSODEG00000012826	TNPO3	100	83.536	Octodon_degus
ENSTNIG00000003347	tnpo3	100	93.413	ENSONIG00000007604	tnpo3	100	93.413	Oreochromis_niloticus
ENSTNIG00000003347	tnpo3	95	81.061	ENSOANG00000011451	TNPO3	100	81.061	Ornithorhynchus_anatinus
ENSTNIG00000003347	tnpo3	99	81.047	ENSOCUG00000010105	TNPO3	99	81.047	Oryctolagus_cuniculus
ENSTNIG00000003347	tnpo3	100	92.225	ENSORLG00000029369	tnpo3	100	92.225	Oryzias_latipes
ENSTNIG00000003347	tnpo3	100	92.225	ENSORLG00020003464	tnpo3	100	92.225	Oryzias_latipes_hni
ENSTNIG00000003347	tnpo3	100	92.333	ENSORLG00015002610	tnpo3	100	92.333	Oryzias_latipes_hsok
ENSTNIG00000003347	tnpo3	100	92.441	ENSOMEG00000021006	tnpo3	100	92.441	Oryzias_melastigma
ENSTNIG00000003347	tnpo3	100	84.017	ENSOGAG00000015340	TNPO3	100	84.017	Otolemur_garnettii
ENSTNIG00000003347	tnpo3	100	84.341	ENSOARG00000004026	TNPO3	100	84.341	Ovis_aries
ENSTNIG00000003347	tnpo3	100	84.125	ENSPPAG00000034975	TNPO3	100	84.125	Pan_paniscus
ENSTNIG00000003347	tnpo3	100	84.125	ENSPPRG00000002050	TNPO3	100	84.125	Panthera_pardus
ENSTNIG00000003347	tnpo3	100	84.125	ENSPTIG00000016167	TNPO3	100	84.125	Panthera_tigris_altaica
ENSTNIG00000003347	tnpo3	100	84.125	ENSPTRG00000019676	TNPO3	100	84.125	Pan_troglodytes
ENSTNIG00000003347	tnpo3	98	83.921	ENSPANG00000022226	TNPO3	99	83.921	Papio_anubis
ENSTNIG00000003347	tnpo3	100	84.177	ENSPKIG00000008628	-	100	84.177	Paramormyrops_kingsleyae
ENSTNIG00000003347	tnpo3	100	87.041	ENSPKIG00000023234	tnpo3	100	87.041	Paramormyrops_kingsleyae
ENSTNIG00000003347	tnpo3	61	86.620	ENSPMGG00000009763	tnpo3	99	86.620	Periophthalmus_magnuspinnatus
ENSTNIG00000003347	tnpo3	100	83.801	ENSPEMG00000000422	Tnpo3	100	83.801	Peromyscus_maniculatus_bairdii
ENSTNIG00000003347	tnpo3	95	70.880	ENSPMAG00000008621	tnpo3	100	70.880	Petromyzon_marinus
ENSTNIG00000003347	tnpo3	100	84.341	ENSPCIG00000011366	TNPO3	100	84.341	Phascolarctos_cinereus
ENSTNIG00000003347	tnpo3	100	92.117	ENSPFOG00000013592	tnpo3	99	92.117	Poecilia_formosa
ENSTNIG00000003347	tnpo3	100	92.117	ENSPLAG00000010188	tnpo3	100	92.117	Poecilia_latipinna
ENSTNIG00000003347	tnpo3	100	92.225	ENSPMEG00000022731	tnpo3	100	92.225	Poecilia_mexicana
ENSTNIG00000003347	tnpo3	100	84.125	ENSPPYG00000017990	TNPO3	100	84.125	Pongo_abelii
ENSTNIG00000003347	tnpo3	99	74.791	ENSPCAG00000010158	TNPO3	98	74.791	Procavia_capensis
ENSTNIG00000003347	tnpo3	87	82.736	ENSPCOG00000023901	TNPO3	96	82.736	Propithecus_coquereli
ENSTNIG00000003347	tnpo3	99	78.220	ENSPVAG00000015757	TNPO3	98	78.220	Pteropus_vampyrus
ENSTNIG00000003347	tnpo3	100	93.197	ENSPNYG00000002349	tnpo3	100	93.197	Pundamilia_nyererei
ENSTNIG00000003347	tnpo3	100	91.145	ENSPNAG00000001142	tnpo3	100	91.145	Pygocentrus_nattereri
ENSTNIG00000003347	tnpo3	100	83.909	ENSRNOG00000021758	Tnpo3	100	83.909	Rattus_norvegicus
ENSTNIG00000003347	tnpo3	100	84.233	ENSRBIG00000042549	TNPO3	100	84.233	Rhinopithecus_bieti
ENSTNIG00000003347	tnpo3	100	84.233	ENSRROG00000039264	TNPO3	100	84.233	Rhinopithecus_roxellana
ENSTNIG00000003347	tnpo3	100	68.438	ENSSBOG00000029642	TNPO3	100	68.438	Saimiri_boliviensis_boliviensis
ENSTNIG00000003347	tnpo3	96	84.537	ENSSHAG00000006837	TNPO3	100	84.537	Sarcophilus_harrisii
ENSTNIG00000003347	tnpo3	100	83.174	ENSSFOG00015004256	tnpo3	100	83.174	Scleropages_formosus
ENSTNIG00000003347	tnpo3	100	88.229	ENSSFOG00015001474	tnpo3	100	88.229	Scleropages_formosus
ENSTNIG00000003347	tnpo3	100	94.060	ENSSMAG00000010422	tnpo3	97	94.060	Scophthalmus_maximus
ENSTNIG00000003347	tnpo3	100	94.708	ENSSDUG00000004850	tnpo3	100	94.708	Seriola_dumerili
ENSTNIG00000003347	tnpo3	100	94.708	ENSSLDG00000016927	tnpo3	100	94.708	Seriola_lalandi_dorsalis
ENSTNIG00000003347	tnpo3	95	72.807	ENSSARG00000013893	TNPO3	98	72.807	Sorex_araneus
ENSTNIG00000003347	tnpo3	99	79.935	ENSSPUG00000007457	TNPO3	99	79.978	Sphenodon_punctatus
ENSTNIG00000003347	tnpo3	79	95.879	ENSSPAG00000014209	tnpo3	99	95.879	Stegastes_partitus
ENSTNIG00000003347	tnpo3	100	84.125	ENSSSCG00000016572	TNPO3	100	84.125	Sus_scrofa
ENSTNIG00000003347	tnpo3	88	81.410	ENSTBEG00000007220	TNPO3	90	81.410	Tupaia_belangeri
ENSTNIG00000003347	tnpo3	99	71.623	ENSTTRG00000014618	TNPO3	98	71.623	Tursiops_truncatus
ENSTNIG00000003347	tnpo3	100	84.125	ENSUAMG00000021281	TNPO3	100	84.125	Ursus_americanus
ENSTNIG00000003347	tnpo3	100	84.125	ENSUMAG00000006882	TNPO3	100	84.125	Ursus_maritimus
ENSTNIG00000003347	tnpo3	85	70.475	ENSVPAG00000006166	TNPO3	88	70.475	Vicugna_pacos
ENSTNIG00000003347	tnpo3	100	84.125	ENSVVUG00000011004	TNPO3	100	83.671	Vulpes_vulpes
ENSTNIG00000003347	tnpo3	99	76.026	ENSXETG00000015009	tnpo3	99	76.026	Xenopus_tropicalis
ENSTNIG00000003347	tnpo3	100	91.901	ENSXMAG00000013062	tnpo3	100	91.901	Xiphophorus_maculatus