EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000003363 (Gene tree)
Gene ID: -
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 9524 bases
Position: chrUn_random:9659640-9669163
Accession: ZDB-GENE-040407-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000001478	Surp	PF01805.20	7.8e-18	1	1
ENSTNIP00000005950	Surp	PF01805.20	8.4e-18	1	1
ENSTNIP00000005950	G-patch	PF01585.23	7.2e-10	1	1
ENSTNIP00000001478	G-patch	PF01585.23	7.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006098	-	2676	-	ENSTNIP00000005950	892 (aa)	-	H3CCH8
ENSTNIT00000003795	-	2697	-	ENSTNIP00000001478	899 (aa)	-	H3BZR2

Gene Model

Click here to download ENSTNIG00000003363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003363's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003363	cherp	80	62.891	ENSG00000085872	CHERP	100	63.714	Homo_sapiens
ENSTNIG00000003363	cherp	79	65.536	ENSAMEG00000010048	CHERP	99	63.597	Ailuropoda_melanoleuca
ENSTNIG00000003363	cherp	80	84.478	ENSACIG00000019242	cherp	99	77.876	Amphilophus_citrinellus
ENSTNIG00000003363	cherp	99	81.090	ENSAOCG00000017846	cherp	99	79.399	Amphiprion_ocellaris
ENSTNIG00000003363	cherp	99	81.960	ENSAPEG00000021128	cherp	99	80.156	Amphiprion_percula
ENSTNIG00000003363	cherp	80	84.882	ENSATEG00000006341	cherp	98	80.556	Anabas_testudineus
ENSTNIG00000003363	cherp	77	64.355	ENSAPLG00000010773	CHERP	99	62.734	Anas_platyrhynchos
ENSTNIG00000003363	cherp	80	62.003	ENSANAG00000024284	CHERP	100	63.502	Aotus_nancymaae
ENSTNIG00000003363	cherp	99	82.667	ENSACLG00000020053	cherp	99	81.375	Astatotilapia_calliptera
ENSTNIG00000003363	cherp	79	71.198	ENSAMXG00000021637	cherp	93	68.035	Astyanax_mexicanus
ENSTNIG00000003363	cherp	99	61.229	ENSBTAG00000005289	CHERP	100	64.141	Bos_taurus
ENSTNIG00000003363	cherp	80	62.003	ENSCJAG00000040462	CHERP	100	63.502	Callithrix_jacchus
ENSTNIG00000003363	cherp	79	63.446	ENSCAFG00000015671	CHERP	100	64.034	Canis_familiaris
ENSTNIG00000003363	cherp	79	62.291	ENSCAFG00020009941	CHERP	100	63.819	Canis_lupus_dingo
ENSTNIG00000003363	cherp	87	76.596	ENSCHIG00000013765	CHERP	96	76.596	Capra_hircus
ENSTNIG00000003363	cherp	88	58.451	ENSCAPG00000000910	CHERP	88	59.857	Cavia_aperea
ENSTNIG00000003363	cherp	79	62.872	ENSCPOG00000019949	CHERP	99	63.163	Cavia_porcellus
ENSTNIG00000003363	cherp	80	62.003	ENSCCAG00000031534	CHERP	100	63.502	Cebus_capucinus
ENSTNIG00000003363	cherp	80	62.179	ENSCATG00000031409	CHERP	100	63.330	Cercocebus_atys
ENSTNIG00000003363	cherp	68	62.853	ENSCLAG00000005484	CHERP	93	64.252	Chinchilla_lanigera
ENSTNIG00000003363	cherp	80	63.021	ENSCSAG00000005740	CHERP	100	63.714	Chlorocebus_sabaeus
ENSTNIG00000003363	cherp	80	65.814	ENSCPBG00000014970	CHERP	99	63.931	Chrysemys_picta_bellii
ENSTNIG00000003363	cherp	68	49.481	ENSCING00000004814	-	76	49.650	Ciona_intestinalis
ENSTNIG00000003363	cherp	55	52.830	ENSCSAVG00000002455	-	50	74.194	Ciona_savignyi
ENSTNIG00000003363	cherp	80	63.802	ENSCANG00000032053	CHERP	100	63.714	Colobus_angolensis_palliatus
ENSTNIG00000003363	cherp	80	62.468	ENSCGRG00001023316	Cherp	99	63.684	Cricetulus_griseus_chok1gshd
ENSTNIG00000003363	cherp	79	63.660	ENSCGRG00000015901	Cherp	99	63.987	Cricetulus_griseus_crigri
ENSTNIG00000003363	cherp	80	82.108	ENSCSEG00000019700	cherp	99	78.767	Cynoglossus_semilaevis
ENSTNIG00000003363	cherp	76	81.140	ENSCVAG00000003622	cherp	93	79.240	Cyprinodon_variegatus
ENSTNIG00000003363	cherp	79	72.045	ENSDARG00000021812	cherp	100	76.265	Danio_rerio
ENSTNIG00000003363	cherp	79	64.619	ENSDORG00000027623	Cherp	100	65.689	Dipodomys_ordii
ENSTNIG00000003363	cherp	79	63.316	ENSEASG00005000428	CHERP	92	63.927	Equus_asinus_asinus
ENSTNIG00000003363	cherp	79	63.838	ENSECAG00000012713	CHERP	100	63.821	Equus_caballus
ENSTNIG00000003363	cherp	80	74.619	ENSELUG00000023026	cherp	98	71.413	Esox_lucius
ENSTNIG00000003363	cherp	79	62.259	ENSFCAG00000013172	CHERP	100	63.368	Felis_catus
ENSTNIG00000003363	cherp	80	65.730	ENSFALG00000013410	CHERP	86	63.538	Ficedula_albicollis
ENSTNIG00000003363	cherp	79	58.855	ENSFDAG00000015981	CHERP	100	57.068	Fukomys_damarensis
ENSTNIG00000003363	cherp	99	70.721	ENSFHEG00000009720	cherp	97	70.249	Fundulus_heteroclitus
ENSTNIG00000003363	cherp	79	76.290	ENSGMOG00000008654	cherp	99	74.610	Gadus_morhua
ENSTNIG00000003363	cherp	80	65.633	ENSGALG00000003824	CHERP	88	63.931	Gallus_gallus
ENSTNIG00000003363	cherp	79	77.686	ENSGACG00000002053	cherp	98	74.257	Gasterosteus_aculeatus
ENSTNIG00000003363	cherp	79	65.722	ENSGAGG00000014208	CHERP	99	63.715	Gopherus_agassizii
ENSTNIG00000003363	cherp	80	85.635	ENSHBUG00000007405	cherp	99	81.596	Haplochromis_burtoni
ENSTNIG00000003363	cherp	80	63.719	ENSHGLG00000002993	CHERP	99	64.270	Heterocephalus_glaber_female
ENSTNIG00000003363	cherp	79	78.363	ENSHCOG00000007691	cherp	99	72.885	Hippocampus_comes
ENSTNIG00000003363	cherp	80	74.521	ENSIPUG00000025008	cherp	99	70.044	Ictalurus_punctatus
ENSTNIG00000003363	cherp	79	64.153	ENSSTOG00000012089	CHERP	99	64.030	Ictidomys_tridecemlineatus
ENSTNIG00000003363	cherp	80	63.542	ENSJJAG00000017982	Cherp	99	62.299	Jaculus_jaculus
ENSTNIG00000003363	cherp	80	82.985	ENSKMAG00000009101	cherp	99	79.333	Kryptolebias_marmoratus
ENSTNIG00000003363	cherp	85	77.836	ENSLBEG00000007586	cherp	91	80.677	Labrus_bergylta
ENSTNIG00000003363	cherp	80	65.155	ENSLACG00000018221	CHERP	99	63.053	Latimeria_chalumnae
ENSTNIG00000003363	cherp	80	71.545	ENSLOCG00000003654	cherp	99	68.359	Lepisosteus_oculatus
ENSTNIG00000003363	cherp	79	63.937	ENSLAFG00000009096	CHERP	100	64.141	Loxodonta_africana
ENSTNIG00000003363	cherp	80	62.003	ENSMFAG00000033267	CHERP	100	63.502	Macaca_fascicularis
ENSTNIG00000003363	cherp	79	62.033	ENSMMUG00000012958	CHERP	100	61.035	Macaca_mulatta
ENSTNIG00000003363	cherp	80	62.003	ENSMNEG00000004125	CHERP	100	63.502	Macaca_nemestrina
ENSTNIG00000003363	cherp	76	70.787	ENSMLEG00000044337	CHERP	100	65.746	Mandrillus_leucophaeus
ENSTNIG00000003363	cherp	80	85.112	ENSMAMG00000022269	cherp	99	81.605	Mastacembelus_armatus
ENSTNIG00000003363	cherp	88	86.022	ENSMZEG00005018014	cherp	99	81.264	Maylandia_zebra
ENSTNIG00000003363	cherp	69	67.031	ENSMGAG00000005571	CHERP	92	64.504	Meleagris_gallopavo
ENSTNIG00000003363	cherp	80	62.404	ENSMAUG00000015856	Cherp	99	63.053	Mesocricetus_auratus
ENSTNIG00000003363	cherp	79	63.958	ENSMICG00000004577	CHERP	100	64.454	Microcebus_murinus
ENSTNIG00000003363	cherp	80	62.710	ENSMOCG00000014697	Cherp	99	63.812	Microtus_ochrogaster
ENSTNIG00000003363	cherp	79	86.969	ENSMMOG00000008525	cherp	96	82.103	Mola_mola
ENSTNIG00000003363	cherp	80	83.472	ENSMALG00000020688	cherp	99	79.022	Monopterus_albus
ENSTNIG00000003363	cherp	80	62.934	MGP_CAROLIEiJ_G0031220	Cherp	100	62.304	Mus_caroli
ENSTNIG00000003363	cherp	80	62.853	ENSMUSG00000052488	Cherp	100	62.004	Mus_musculus
ENSTNIG00000003363	cherp	80	63.389	MGP_PahariEiJ_G0021685	Cherp	99	63.490	Mus_pahari
ENSTNIG00000003363	cherp	80	62.968	MGP_SPRETEiJ_G0032341	Cherp	100	62.329	Mus_spretus
ENSTNIG00000003363	cherp	79	64.276	ENSMPUG00000016023	CHERP	98	62.724	Mustela_putorius_furo
ENSTNIG00000003363	cherp	80	57.969	ENSMLUG00000013881	CHERP	100	60.149	Myotis_lucifugus
ENSTNIG00000003363	cherp	80	82.555	ENSNBRG00000001914	cherp	99	75.738	Neolamprologus_brichardi
ENSTNIG00000003363	cherp	80	63.021	ENSNLEG00000005536	CHERP	100	63.714	Nomascus_leucogenys
ENSTNIG00000003363	cherp	69	74.658	ENSMEUG00000010840	CHERP	91	74.150	Notamacropus_eugenii
ENSTNIG00000003363	cherp	79	64.465	ENSODEG00000001528	CHERP	99	62.866	Octodon_degus
ENSTNIG00000003363	cherp	80	83.425	ENSONIG00000007686	cherp	99	80.066	Oreochromis_niloticus
ENSTNIG00000003363	cherp	80	83.056	ENSORLG00000000138	cherp	99	79.171	Oryzias_latipes
ENSTNIG00000003363	cherp	80	82.778	ENSORLG00020013142	cherp	99	79.059	Oryzias_latipes_hni
ENSTNIG00000003363	cherp	80	82.615	ENSORLG00015008911	cherp	99	79.059	Oryzias_latipes_hsok
ENSTNIG00000003363	cherp	80	82.639	ENSOMEG00000016947	cherp	99	79.395	Oryzias_melastigma
ENSTNIG00000003363	cherp	80	62.760	ENSOGAG00000005834	CHERP	99	62.995	Otolemur_garnettii
ENSTNIG00000003363	cherp	79	55.759	ENSOARG00000018876	CHERP	97	58.047	Ovis_aries
ENSTNIG00000003363	cherp	80	62.051	ENSPPAG00000029195	CHERP	100	63.330	Pan_paniscus
ENSTNIG00000003363	cherp	79	62.259	ENSPPRG00000003275	CHERP	100	63.368	Panthera_pardus
ENSTNIG00000003363	cherp	88	81.250	ENSPTIG00000019778	CHERP	99	53.429	Panthera_tigris_altaica
ENSTNIG00000003363	cherp	80	63.069	ENSPTRG00000010647	CHERP	100	63.539	Pan_troglodytes
ENSTNIG00000003363	cherp	80	62.003	ENSPANG00000011698	CHERP	100	63.502	Papio_anubis
ENSTNIG00000003363	cherp	79	67.222	ENSPKIG00000000423	cherp	98	65.851	Paramormyrops_kingsleyae
ENSTNIG00000003363	cherp	79	66.171	ENSPSIG00000011974	CHERP	99	63.931	Pelodiscus_sinensis
ENSTNIG00000003363	cherp	89	85.714	ENSPMGG00000023606	cherp	99	69.843	Periophthalmus_magnuspinnatus
ENSTNIG00000003363	cherp	80	61.538	ENSPEMG00000011238	Cherp	99	63.235	Peromyscus_maniculatus_bairdii
ENSTNIG00000003363	cherp	79	64.744	ENSPCIG00000019615	CHERP	95	63.924	Phascolarctos_cinereus
ENSTNIG00000003363	cherp	99	79.153	ENSPFOG00000016899	cherp	99	78.754	Poecilia_formosa
ENSTNIG00000003363	cherp	65	84.083	ENSPMEG00000002214	cherp	98	77.470	Poecilia_mexicana
ENSTNIG00000003363	cherp	99	79.264	ENSPREG00000020774	cherp	99	78.865	Poecilia_reticulata
ENSTNIG00000003363	cherp	80	63.186	ENSPPYG00000009691	CHERP	100	62.165	Pongo_abelii
ENSTNIG00000003363	cherp	88	83.544	ENSPCAG00000001337	CHERP	89	79.762	Procavia_capensis
ENSTNIG00000003363	cherp	88	81.481	ENSPVAG00000004320	CHERP	89	79.762	Pteropus_vampyrus
ENSTNIG00000003363	cherp	99	82.889	ENSPNYG00000003942	cherp	99	81.596	Pundamilia_nyererei
ENSTNIG00000003363	cherp	80	72.715	ENSPNAG00000017179	cherp	99	69.313	Pygocentrus_nattereri
ENSTNIG00000003363	cherp	80	63.192	ENSRNOG00000012323	Cherp	99	63.309	Rattus_norvegicus
ENSTNIG00000003363	cherp	80	63.021	ENSRBIG00000038621	CHERP	100	63.502	Rhinopithecus_bieti
ENSTNIG00000003363	cherp	80	62.003	ENSRROG00000040770	CHERP	100	63.502	Rhinopithecus_roxellana
ENSTNIG00000003363	cherp	80	62.179	ENSSBOG00000014492	CHERP	100	63.330	Saimiri_boliviensis_boliviensis
ENSTNIG00000003363	cherp	99	63.057	ENSSFOG00015008022	cherp	84	78.947	Scleropages_formosus
ENSTNIG00000003363	cherp	80	81.351	ENSSMAG00000005362	cherp	99	77.850	Scophthalmus_maximus
ENSTNIG00000003363	cherp	99	81.284	ENSSDUG00000019712	cherp	99	78.890	Seriola_dumerili
ENSTNIG00000003363	cherp	99	81.888	ENSSLDG00000012659	cherp	99	80.022	Seriola_lalandi_dorsalis
ENSTNIG00000003363	cherp	79	67.684	ENSSPUG00000008901	CHERP	100	66.154	Sphenodon_punctatus
ENSTNIG00000003363	cherp	99	82.131	ENSSPAG00000010681	cherp	99	81.132	Stegastes_partitus
ENSTNIG00000003363	cherp	79	63.316	ENSSSCG00000013860	CHERP	100	64.141	Sus_scrofa
ENSTNIG00000003363	cherp	80	65.863	ENSTGUG00000000680	CHERP	100	64.125	Taeniopygia_guttata
ENSTNIG00000003363	cherp	86	85.290	ENSTRUG00000007429	cherp	99	86.805	Takifugu_rubripes
ENSTNIG00000003363	cherp	69	64.062	ENSTTRG00000015006	CHERP	89	64.062	Tursiops_truncatus
ENSTNIG00000003363	cherp	100	59.009	ENSUAMG00000017295	CHERP	80	62.432	Ursus_americanus
ENSTNIG00000003363	cherp	79	61.972	ENSVVUG00000016546	CHERP	100	63.550	Vulpes_vulpes