EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000003460 (Gene tree)
Gene ID: -
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 12084 bases
Position: chr10:10570100-10582183
Accession: ZDB-GENE-030131-577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006047	RRM_4	PF10598.9	2.1e-48	1	1
ENSTNIP00000006047	U5_2-snRNA_bdg	PF10597.9	4.7e-74	1	1
ENSTNIP00000006047	PRO8NT	PF08082.11	7.3e-87	1	1
ENSTNIP00000006047	U6-snRNA_bdg	PF10596.9	3.8e-87	1	1
ENSTNIP00000006047	PROCN	PF08083.11	5.2e-141	1	2
ENSTNIP00000006047	PROCN	PF08083.11	5.2e-141	2	2
ENSTNIP00000006047	PRP8_domainIV	PF12134.8	2.8e-130	1	1
ENSTNIP00000006047	PROCT	PF08084.11	3.4e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006195	-	6693	-	ENSTNIP00000006047	2230 (aa)	-	H3CCS4

Gene Model

Click here to download ENSTNIG00000003460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003460	prpf8	99	98.746	ENSG00000174231	PRPF8	95	98.746	Homo_sapiens
ENSTNIG00000003460	prpf8	99	99.582	ENSAPOG00000010079	prpf8	95	99.582	Acanthochromis_polyacanthus
ENSTNIG00000003460	prpf8	99	98.746	ENSAMEG00000007940	PRPF8	95	98.746	Ailuropoda_melanoleuca
ENSTNIG00000003460	prpf8	99	97.439	ENSACIG00000018280	prpf8	95	97.439	Amphilophus_citrinellus
ENSTNIG00000003460	prpf8	99	99.582	ENSAOCG00000010725	prpf8	95	99.582	Amphiprion_ocellaris
ENSTNIG00000003460	prpf8	99	99.582	ENSAPEG00000014397	prpf8	95	99.582	Amphiprion_percula
ENSTNIG00000003460	prpf8	99	98.805	ENSATEG00000010062	prpf8	95	98.805	Anabas_testudineus
ENSTNIG00000003460	prpf8	95	98.865	ENSAPLG00000010357	PRPF8	94	98.865	Anas_platyrhynchos
ENSTNIG00000003460	prpf8	81	96.794	ENSACAG00000014784	PRPF8	93	96.794	Anolis_carolinensis
ENSTNIG00000003460	prpf8	99	98.746	ENSANAG00000032629	PRPF8	95	98.746	Aotus_nancymaae
ENSTNIG00000003460	prpf8	99	99.582	ENSACLG00000020858	prpf8	95	99.582	Astatotilapia_calliptera
ENSTNIG00000003460	prpf8	99	99.343	ENSAMXG00000020291	prpf8	95	99.343	Astyanax_mexicanus
ENSTNIG00000003460	prpf8	99	98.746	ENSBTAG00000011488	PRPF8	95	98.746	Bos_taurus
ENSTNIG00000003460	prpf8	98	88.246	WBGene00004187	prp-8	94	88.246	Caenorhabditis_elegans
ENSTNIG00000003460	prpf8	99	98.746	ENSCJAG00000001911	PRPF8	95	98.746	Callithrix_jacchus
ENSTNIG00000003460	prpf8	99	98.746	ENSCAFG00000019221	PRPF8	95	98.746	Canis_familiaris
ENSTNIG00000003460	prpf8	95	98.746	ENSCAFG00020009943	PRPF8	94	98.746	Canis_lupus_dingo
ENSTNIG00000003460	prpf8	99	98.746	ENSCHIG00000017499	PRPF8	95	98.746	Capra_hircus
ENSTNIG00000003460	prpf8	99	98.746	ENSTSYG00000014120	PRPF8	95	98.746	Carlito_syrichta
ENSTNIG00000003460	prpf8	95	95.759	ENSCAPG00000009459	PRPF8	94	95.759	Cavia_aperea
ENSTNIG00000003460	prpf8	99	98.746	ENSCPOG00000010379	PRPF8	95	98.746	Cavia_porcellus
ENSTNIG00000003460	prpf8	99	98.746	ENSCCAG00000031983	-	95	98.746	Cebus_capucinus
ENSTNIG00000003460	prpf8	99	98.746	ENSCATG00000038595	PRPF8	95	98.746	Cercocebus_atys
ENSTNIG00000003460	prpf8	99	98.746	ENSCLAG00000004388	PRPF8	95	98.746	Chinchilla_lanigera
ENSTNIG00000003460	prpf8	99	98.746	ENSCSAG00000013929	PRPF8	95	98.746	Chlorocebus_sabaeus
ENSTNIG00000003460	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	83	97.333	Choloepus_hoffmanni
ENSTNIG00000003460	prpf8	99	98.865	ENSCPBG00000020409	PRPF8	95	98.865	Chrysemys_picta_bellii
ENSTNIG00000003460	prpf8	97	94.430	ENSCSAVG00000007825	-	100	90.365	Ciona_savignyi
ENSTNIG00000003460	prpf8	99	98.746	ENSCANG00000043088	PRPF8	95	98.746	Colobus_angolensis_palliatus
ENSTNIG00000003460	prpf8	71	99.213	ENSCGRG00000005129	Prpf8	92	99.213	Cricetulus_griseus_crigri
ENSTNIG00000003460	prpf8	99	99.522	ENSCSEG00000007905	prpf8	95	99.522	Cynoglossus_semilaevis
ENSTNIG00000003460	prpf8	99	99.403	ENSDARG00000026180	prpf8	95	99.403	Danio_rerio
ENSTNIG00000003460	prpf8	92	99.073	ENSDNOG00000018471	PRPF8	93	99.073	Dasypus_novemcinctus
ENSTNIG00000003460	prpf8	82	98.784	ENSDORG00000006185	Prpf8	90	98.784	Dipodomys_ordii
ENSTNIG00000003460	prpf8	99	93.731	FBgn0033688	Prp8	91	93.731	Drosophila_melanogaster
ENSTNIG00000003460	prpf8	99	94.385	ENSETEG00000017592	PRPF8	95	94.385	Echinops_telfairi
ENSTNIG00000003460	prpf8	99	94.265	ENSEBUG00000006548	prpf8	94	94.265	Eptatretus_burgeri
ENSTNIG00000003460	prpf8	99	98.746	ENSEASG00005009514	PRPF8	95	98.746	Equus_asinus_asinus
ENSTNIG00000003460	prpf8	96	98.746	ENSECAG00000021318	PRPF8	94	98.746	Equus_caballus
ENSTNIG00000003460	prpf8	69	98.913	ENSEEUG00000012120	-	65	98.913	Erinaceus_europaeus
ENSTNIG00000003460	prpf8	97	97.599	ENSELUG00000007120	prpf8	94	97.599	Esox_lucius
ENSTNIG00000003460	prpf8	99	98.746	ENSFCAG00000006297	PRPF8	95	98.746	Felis_catus
ENSTNIG00000003460	prpf8	99	98.865	ENSFALG00000006628	PRPF8	95	98.865	Ficedula_albicollis
ENSTNIG00000003460	prpf8	99	98.746	ENSFDAG00000004711	PRPF8	95	98.746	Fukomys_damarensis
ENSTNIG00000003460	prpf8	99	99.283	ENSFHEG00000021084	prpf8	95	99.283	Fundulus_heteroclitus
ENSTNIG00000003460	prpf8	99	96.471	ENSGMOG00000002028	prpf8	95	96.471	Gadus_morhua
ENSTNIG00000003460	prpf8	99	98.865	ENSGALG00000002943	PRPF8	95	98.865	Gallus_gallus
ENSTNIG00000003460	prpf8	99	99.343	ENSGAFG00000010337	prpf8	94	99.343	Gambusia_affinis
ENSTNIG00000003460	prpf8	99	99.642	ENSGACG00000008504	prpf8	95	99.642	Gasterosteus_aculeatus
ENSTNIG00000003460	prpf8	99	98.865	ENSGAGG00000008350	PRPF8	95	98.865	Gopherus_agassizii
ENSTNIG00000003460	prpf8	99	98.746	ENSGGOG00000005516	PRPF8	95	98.746	Gorilla_gorilla
ENSTNIG00000003460	prpf8	99	99.582	ENSHBUG00000016192	prpf8	95	99.582	Haplochromis_burtoni
ENSTNIG00000003460	prpf8	99	98.746	ENSHGLG00000012029	PRPF8	95	98.746	Heterocephalus_glaber_female
ENSTNIG00000003460	prpf8	99	98.746	ENSHGLG00100016494	PRPF8	95	98.746	Heterocephalus_glaber_male
ENSTNIG00000003460	prpf8	99	99.522	ENSHCOG00000016414	prpf8	95	99.522	Hippocampus_comes
ENSTNIG00000003460	prpf8	99	99.283	ENSIPUG00000023230	prpf8	95	99.283	Ictalurus_punctatus
ENSTNIG00000003460	prpf8	99	98.746	ENSSTOG00000005128	PRPF8	95	98.746	Ictidomys_tridecemlineatus
ENSTNIG00000003460	prpf8	99	95.759	ENSJJAG00000021159	Prpf8	94	95.759	Jaculus_jaculus
ENSTNIG00000003460	prpf8	99	99.462	ENSKMAG00000016118	prpf8	94	99.462	Kryptolebias_marmoratus
ENSTNIG00000003460	prpf8	99	99.522	ENSLBEG00000026903	prpf8	95	99.522	Labrus_bergylta
ENSTNIG00000003460	prpf8	94	98.649	ENSLACG00000010479	PRPF8	94	98.778	Latimeria_chalumnae
ENSTNIG00000003460	prpf8	99	99.343	ENSLOCG00000005409	prpf8	94	99.343	Lepisosteus_oculatus
ENSTNIG00000003460	prpf8	99	98.746	ENSLAFG00000015445	PRPF8	95	98.746	Loxodonta_africana
ENSTNIG00000003460	prpf8	99	98.746	ENSMFAG00000039995	PRPF8	95	98.746	Macaca_fascicularis
ENSTNIG00000003460	prpf8	99	98.746	ENSMMUG00000004820	PRPF8	95	98.746	Macaca_mulatta
ENSTNIG00000003460	prpf8	99	98.746	ENSMNEG00000035713	PRPF8	95	98.746	Macaca_nemestrina
ENSTNIG00000003460	prpf8	99	98.746	ENSMLEG00000037937	PRPF8	95	98.746	Mandrillus_leucophaeus
ENSTNIG00000003460	prpf8	99	99.462	ENSMAMG00000008919	prpf8	95	99.462	Mastacembelus_armatus
ENSTNIG00000003460	prpf8	99	99.582	ENSMZEG00005015073	prpf8	95	99.582	Maylandia_zebra
ENSTNIG00000003460	prpf8	99	98.865	ENSMGAG00000004769	PRPF8	95	98.865	Meleagris_gallopavo
ENSTNIG00000003460	prpf8	99	98.746	ENSMICG00000010320	PRPF8	95	98.746	Microcebus_murinus
ENSTNIG00000003460	prpf8	99	98.746	ENSMOCG00000016838	Prpf8	95	98.746	Microtus_ochrogaster
ENSTNIG00000003460	prpf8	99	99.522	ENSMMOG00000011887	prpf8	94	99.522	Mola_mola
ENSTNIG00000003460	prpf8	99	98.746	ENSMODG00000010480	PRPF8	95	98.746	Monodelphis_domestica
ENSTNIG00000003460	prpf8	96	98.353	ENSMALG00000003558	prpf8	94	98.353	Monopterus_albus
ENSTNIG00000003460	prpf8	99	98.686	MGP_CAROLIEiJ_G0016740	Prpf8	95	98.686	Mus_caroli
ENSTNIG00000003460	prpf8	99	98.686	ENSMUSG00000020850	Prpf8	95	98.686	Mus_musculus
ENSTNIG00000003460	prpf8	99	98.686	MGP_PahariEiJ_G0017877	Prpf8	95	98.686	Mus_pahari
ENSTNIG00000003460	prpf8	99	98.686	MGP_SPRETEiJ_G0017583	Prpf8	95	98.686	Mus_spretus
ENSTNIG00000003460	prpf8	99	98.746	ENSMPUG00000013227	PRPF8	95	98.746	Mustela_putorius_furo
ENSTNIG00000003460	prpf8	99	98.629	ENSMLUG00000002666	PRPF8	95	98.629	Myotis_lucifugus
ENSTNIG00000003460	prpf8	99	96.296	ENSNGAG00000005305	Prpf8	94	96.296	Nannospalax_galili
ENSTNIG00000003460	prpf8	99	99.582	ENSNBRG00000013127	prpf8	95	99.582	Neolamprologus_brichardi
ENSTNIG00000003460	prpf8	100	88.077	ENSNLEG00000000897	PRPF8	99	88.077	Nomascus_leucogenys
ENSTNIG00000003460	prpf8	97	96.237	ENSMEUG00000015999	PRPF8	94	96.237	Notamacropus_eugenii
ENSTNIG00000003460	prpf8	99	98.746	ENSOPRG00000003102	PRPF8	95	98.746	Ochotona_princeps
ENSTNIG00000003460	prpf8	99	98.746	ENSODEG00000008468	PRPF8	95	98.746	Octodon_degus
ENSTNIG00000003460	prpf8	99	99.522	ENSONIG00000008153	prpf8	95	99.522	Oreochromis_niloticus
ENSTNIG00000003460	prpf8	80	99.159	ENSOANG00000004250	PRPF8	91	99.159	Ornithorhynchus_anatinus
ENSTNIG00000003460	prpf8	99	98.746	ENSOCUG00000000081	PRPF8	95	98.746	Oryctolagus_cuniculus
ENSTNIG00000003460	prpf8	99	99.403	ENSORLG00000008036	prpf8	95	99.403	Oryzias_latipes
ENSTNIG00000003460	prpf8	99	99.343	ENSORLG00020021070	prpf8	95	99.343	Oryzias_latipes_hni
ENSTNIG00000003460	prpf8	99	99.403	ENSORLG00015002340	prpf8	95	99.403	Oryzias_latipes_hsok
ENSTNIG00000003460	prpf8	99	97.133	ENSOMEG00000016866	prpf8	95	97.133	Oryzias_melastigma
ENSTNIG00000003460	prpf8	99	98.569	ENSOARG00000013312	PRPF8	95	98.569	Ovis_aries
ENSTNIG00000003460	prpf8	99	98.746	ENSPPAG00000042753	PRPF8	95	98.746	Pan_paniscus
ENSTNIG00000003460	prpf8	99	98.746	ENSPPRG00000008746	PRPF8	95	98.746	Panthera_pardus
ENSTNIG00000003460	prpf8	99	98.626	ENSPTIG00000019200	PRPF8	95	98.626	Panthera_tigris_altaica
ENSTNIG00000003460	prpf8	99	98.746	ENSPTRG00000039576	PRPF8	95	98.746	Pan_troglodytes
ENSTNIG00000003460	prpf8	98	98.746	ENSPANG00000024607	PRPF8	93	98.746	Papio_anubis
ENSTNIG00000003460	prpf8	99	99.283	ENSPKIG00000011201	prpf8	95	99.283	Paramormyrops_kingsleyae
ENSTNIG00000003460	prpf8	99	98.805	ENSPSIG00000013393	PRPF8	95	98.805	Pelodiscus_sinensis
ENSTNIG00000003460	prpf8	99	98.746	ENSPEMG00000021699	Prpf8	95	98.746	Peromyscus_maniculatus_bairdii
ENSTNIG00000003460	prpf8	95	96.057	ENSPMAG00000005438	prpf8	94	96.057	Petromyzon_marinus
ENSTNIG00000003460	prpf8	99	98.746	ENSPCIG00000022603	PRPF8	95	98.746	Phascolarctos_cinereus
ENSTNIG00000003460	prpf8	99	99.343	ENSPFOG00000007005	prpf8	95	99.343	Poecilia_formosa
ENSTNIG00000003460	prpf8	99	99.343	ENSPLAG00000020777	prpf8	95	99.343	Poecilia_latipinna
ENSTNIG00000003460	prpf8	99	99.343	ENSPMEG00000004051	prpf8	95	99.343	Poecilia_mexicana
ENSTNIG00000003460	prpf8	99	99.403	ENSPREG00000021902	prpf8	95	99.403	Poecilia_reticulata
ENSTNIG00000003460	prpf8	99	98.746	ENSPPYG00000007777	PRPF8	95	98.746	Pongo_abelii
ENSTNIG00000003460	prpf8	89	97.884	ENSPCAG00000008938	PRPF8	85	97.884	Procavia_capensis
ENSTNIG00000003460	prpf8	99	98.746	ENSPCOG00000015182	PRPF8	95	98.746	Propithecus_coquereli
ENSTNIG00000003460	prpf8	92	98.674	ENSPVAG00000002134	PRPF8	87	98.674	Pteropus_vampyrus
ENSTNIG00000003460	prpf8	99	99.582	ENSPNYG00000016356	prpf8	95	99.582	Pundamilia_nyererei
ENSTNIG00000003460	prpf8	99	99.403	ENSPNAG00000009247	prpf8	95	99.403	Pygocentrus_nattereri
ENSTNIG00000003460	prpf8	99	98.686	ENSRNOG00000003495	Prpf8	95	98.686	Rattus_norvegicus
ENSTNIG00000003460	prpf8	99	98.746	ENSRBIG00000031219	PRPF8	95	98.746	Rhinopithecus_bieti
ENSTNIG00000003460	prpf8	99	98.746	ENSRROG00000038014	PRPF8	95	98.746	Rhinopithecus_roxellana
ENSTNIG00000003460	prpf8	98	63.960	YHR165C	PRP8	91	63.960	Saccharomyces_cerevisiae
ENSTNIG00000003460	prpf8	99	98.746	ENSSBOG00000029717	PRPF8	95	98.746	Saimiri_boliviensis_boliviensis
ENSTNIG00000003460	prpf8	99	98.686	ENSSHAG00000006167	PRPF8	95	98.686	Sarcophilus_harrisii
ENSTNIG00000003460	prpf8	99	99.343	ENSSFOG00015013905	prpf8	95	99.343	Scleropages_formosus
ENSTNIG00000003460	prpf8	99	99.582	ENSSMAG00000017736	prpf8	95	99.582	Scophthalmus_maximus
ENSTNIG00000003460	prpf8	99	99.582	ENSSDUG00000003029	prpf8	95	99.582	Seriola_dumerili
ENSTNIG00000003460	prpf8	72	99.562	ENSSLDG00000017096	prpf8	100	99.562	Seriola_lalandi_dorsalis
ENSTNIG00000003460	prpf8	86	94.408	ENSSARG00000002892	PRPF8	82	94.408	Sorex_araneus
ENSTNIG00000003460	prpf8	99	98.865	ENSSPUG00000007463	PRPF8	95	98.865	Sphenodon_punctatus
ENSTNIG00000003460	prpf8	99	98.746	ENSSPAG00000015639	prpf8	95	98.746	Stegastes_partitus
ENSTNIG00000003460	prpf8	99	98.746	ENSSSCG00000017817	PRPF8	95	98.746	Sus_scrofa
ENSTNIG00000003460	prpf8	99	98.865	ENSTGUG00000005648	-	95	98.865	Taeniopygia_guttata
ENSTNIG00000003460	prpf8	99	99.821	ENSTRUG00000015906	prpf8	95	99.821	Takifugu_rubripes
ENSTNIG00000003460	prpf8	87	99.063	ENSTBEG00000006431	PRPF8	83	99.063	Tupaia_belangeri
ENSTNIG00000003460	prpf8	99	98.029	ENSTTRG00000006869	PRPF8	95	98.029	Tursiops_truncatus
ENSTNIG00000003460	prpf8	51	98.328	ENSUAMG00000015644	-	86	98.328	Ursus_americanus
ENSTNIG00000003460	prpf8	99	98.746	ENSUMAG00000009385	PRPF8	95	98.746	Ursus_maritimus
ENSTNIG00000003460	prpf8	71	98.333	ENSVPAG00000006063	-	64	100.000	Vicugna_pacos
ENSTNIG00000003460	prpf8	99	98.746	ENSVVUG00000021695	PRPF8	94	98.746	Vulpes_vulpes
ENSTNIG00000003460	prpf8	99	98.567	ENSXETG00000022259	prpf8	95	98.567	Xenopus_tropicalis
ENSTNIG00000003460	prpf8	99	99.343	ENSXCOG00000012775	prpf8	95	99.343	Xiphophorus_couchianus
ENSTNIG00000003460	prpf8	99	99.403	ENSXMAG00000008505	prpf8	95	99.403	Xiphophorus_maculatus