EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000003546 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2460 bases
Position: chr17:500423-502882
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006135	KH_1	PF00013.29	2.1e-35	1	2
ENSTNIP00000006135	KH_1	PF00013.29	2.1e-35	2	2
ENSTNIP00000006135	KH_2	PF07650.17	8.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006283	-	612	-	ENSTNIP00000006135	203 (aa)	-	H3CD12

Gene Model

Click here to download ENSTNIG00000003546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000003546	zgc:110045	96	60.680	ENSTNIG00000008872	-	82	60.287
ENSTNIG00000003546	zgc:110045	75	35.821	ENSTNIG00000011634	nova1	52	35.821
ENSTNIG00000003546	zgc:110045	68	31.544	ENSTNIG00000005858	-	55	30.872
ENSTNIG00000003546	zgc:110045	78	41.667	ENSTNIG00000006005	hnrnpk	50	39.683
ENSTNIG00000003546	zgc:110045	63	34.586	ENSTNIG00000019815	-	77	34.586
ENSTNIG00000003546	zgc:110045	65	45.283	ENSTNIG00000016472	igf2bp2b	57	35.659
ENSTNIG00000003546	zgc:110045	85	80.347	ENSTNIG00000010615	pcbp3	76	80.347
ENSTNIG00000003546	zgc:110045	72	30.822	ENSTNIG00000009019	fubp3	54	30.657
ENSTNIG00000003546	zgc:110045	88	66.480	ENSTNIG00000017887	-	58	66.480
ENSTNIG00000003546	zgc:110045	85	72.254	ENSTNIG00000012585	pcbp2	53	72.254
ENSTNIG00000003546	zgc:110045	71	38.356	ENSTNIG00000018993	NOVA1	50	38.356
ENSTNIG00000003546	zgc:110045	78	33.600	ENSTNIG00000017755	igf2bp3	59	33.600

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003546	zgc:110045	85	81.503	ENSG00000183570	PCBP3	88	79.503	Homo_sapiens
ENSTNIG00000003546	zgc:110045	94	87.895	ENSAPOG00000023735	zgc:110045	57	87.895	Acanthochromis_polyacanthus
ENSTNIG00000003546	zgc:110045	98	82.828	ENSACIG00000002577	zgc:110045	86	81.959	Amphilophus_citrinellus
ENSTNIG00000003546	zgc:110045	99	82.090	ENSAOCG00000005266	zgc:110045	92	82.090	Amphiprion_ocellaris
ENSTNIG00000003546	zgc:110045	83	93.396	ENSATEG00000011191	zgc:110045	65	93.396	Anabas_testudineus
ENSTNIG00000003546	zgc:110045	94	88.421	ENSACLG00000019285	zgc:110045	70	88.421	Astatotilapia_calliptera
ENSTNIG00000003546	zgc:110045	85	81.503	ENSBTAG00000030775	PCBP3	73	81.503	Bos_taurus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSCAFG00000011907	PCBP3	71	81.503	Canis_familiaris
ENSTNIG00000003546	zgc:110045	85	77.457	ENSCHIG00000015841	PCBP3	69	77.457	Capra_hircus
ENSTNIG00000003546	zgc:110045	85	78.035	ENSTSYG00000005254	PCBP3	66	78.035	Carlito_syrichta
ENSTNIG00000003546	zgc:110045	85	81.503	ENSCPOG00000003648	PCBP3	71	81.503	Cavia_porcellus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSCCAG00000024561	PCBP3	81	79.503	Cebus_capucinus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSCATG00000038419	PCBP3	80	79.503	Cercocebus_atys
ENSTNIG00000003546	zgc:110045	85	81.503	ENSCLAG00000006667	PCBP3	71	81.503	Chinchilla_lanigera
ENSTNIG00000003546	zgc:110045	85	81.503	ENSCANG00000026757	PCBP3	81	79.503	Colobus_angolensis_palliatus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSCGRG00001006836	Pcbp3	71	81.503	Cricetulus_griseus_chok1gshd
ENSTNIG00000003546	zgc:110045	85	81.503	ENSCGRG00000001837	Pcbp3	71	81.503	Cricetulus_griseus_crigri
ENSTNIG00000003546	zgc:110045	96	85.567	ENSCSEG00000010020	zgc:110045	80	87.368	Cynoglossus_semilaevis
ENSTNIG00000003546	zgc:110045	95	84.456	ENSCVAG00000004726	zgc:110045	85	84.456	Cyprinodon_variegatus
ENSTNIG00000003546	zgc:110045	93	80.423	ENSDARG00000057141	zgc:110045	83	80.423	Danio_rerio
ENSTNIG00000003546	zgc:110045	85	81.503	ENSDNOG00000049518	PCBP3	72	81.503	Dasypus_novemcinctus
ENSTNIG00000003546	zgc:110045	85	77.143	ENSDORG00000003640	Pcbp3	68	77.143	Dipodomys_ordii
ENSTNIG00000003546	zgc:110045	79	78.882	ENSEBUG00000009697	zgc:110045	78	80.255	Eptatretus_burgeri
ENSTNIG00000003546	zgc:110045	85	81.503	ENSEASG00005007068	PCBP3	66	81.503	Equus_asinus_asinus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSECAG00000012413	PCBP3	66	81.503	Equus_caballus
ENSTNIG00000003546	zgc:110045	94	82.105	ENSELUG00000019784	zgc:110045	71	82.105	Esox_lucius
ENSTNIG00000003546	zgc:110045	85	81.503	ENSFCAG00000014812	PCBP3	81	79.503	Felis_catus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSFDAG00000009117	PCBP3	71	81.503	Fukomys_damarensis
ENSTNIG00000003546	zgc:110045	99	80.500	ENSFHEG00000018838	-	90	80.500	Fundulus_heteroclitus
ENSTNIG00000003546	zgc:110045	93	83.684	ENSGMOG00000005953	zgc:110045	56	83.684	Gadus_morhua
ENSTNIG00000003546	zgc:110045	96	86.082	ENSGAFG00000017864	zgc:110045	84	86.082	Gambusia_affinis
ENSTNIG00000003546	zgc:110045	96	84.615	ENSGACG00000003044	zgc:110045	59	84.615	Gasterosteus_aculeatus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSGGOG00000003683	PCBP3	81	79.503	Gorilla_gorilla
ENSTNIG00000003546	zgc:110045	94	88.421	ENSHBUG00000012495	zgc:110045	89	88.421	Haplochromis_burtoni
ENSTNIG00000003546	zgc:110045	85	81.503	ENSHGLG00000018620	PCBP3	71	81.503	Heterocephalus_glaber_female
ENSTNIG00000003546	zgc:110045	85	81.503	ENSHGLG00100013590	PCBP3	71	81.503	Heterocephalus_glaber_male
ENSTNIG00000003546	zgc:110045	92	85.027	ENSHCOG00000000818	zgc:110045	85	80.851	Hippocampus_comes
ENSTNIG00000003546	zgc:110045	93	77.778	ENSIPUG00000003932	zgc:110045	69	77.778	Ictalurus_punctatus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSSTOG00000007178	PCBP3	71	81.503	Ictidomys_tridecemlineatus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSJJAG00000021192	Pcbp3	71	81.503	Jaculus_jaculus
ENSTNIG00000003546	zgc:110045	95	86.979	ENSKMAG00000016179	-	92	86.979	Kryptolebias_marmoratus
ENSTNIG00000003546	zgc:110045	99	84.080	ENSLBEG00000023074	zgc:110045	60	89.011	Labrus_bergylta
ENSTNIG00000003546	zgc:110045	85	78.613	ENSLAFG00000020835	PCBP3	78	78.613	Loxodonta_africana
ENSTNIG00000003546	zgc:110045	85	81.503	ENSMFAG00000034574	PCBP3	81	79.503	Macaca_fascicularis
ENSTNIG00000003546	zgc:110045	85	81.503	ENSMMUG00000003825	PCBP3	81	79.503	Macaca_mulatta
ENSTNIG00000003546	zgc:110045	85	81.503	ENSMNEG00000035551	PCBP3	81	79.503	Macaca_nemestrina
ENSTNIG00000003546	zgc:110045	85	81.503	ENSMLEG00000038785	PCBP3	81	79.503	Mandrillus_leucophaeus
ENSTNIG00000003546	zgc:110045	94	87.368	ENSMAMG00000014389	zgc:110045	59	87.368	Mastacembelus_armatus
ENSTNIG00000003546	zgc:110045	94	88.421	ENSMZEG00005011785	zgc:110045	70	88.421	Maylandia_zebra
ENSTNIG00000003546	zgc:110045	85	81.503	ENSMAUG00000007036	Pcbp3	71	81.503	Mesocricetus_auratus
ENSTNIG00000003546	zgc:110045	85	80.925	ENSMICG00000012679	PCBP3	81	78.882	Microcebus_murinus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSMOCG00000016127	Pcbp3	71	81.503	Microtus_ochrogaster
ENSTNIG00000003546	zgc:110045	98	82.323	ENSMMOG00000008399	zgc:110045	92	82.323	Mola_mola
ENSTNIG00000003546	zgc:110045	98	81.313	ENSMALG00000008763	zgc:110045	93	81.313	Monopterus_albus
ENSTNIG00000003546	zgc:110045	85	81.503	MGP_CAROLIEiJ_G0015475	Pcbp3	75	81.503	Mus_caroli
ENSTNIG00000003546	zgc:110045	85	81.503	ENSMUSG00000001120	Pcbp3	75	81.503	Mus_musculus
ENSTNIG00000003546	zgc:110045	85	81.503	MGP_PahariEiJ_G0030889	Pcbp3	75	81.503	Mus_pahari
ENSTNIG00000003546	zgc:110045	85	81.503	MGP_SPRETEiJ_G0016288	Pcbp3	75	81.503	Mus_spretus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSMLUG00000003074	PCBP3	71	81.503	Myotis_lucifugus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSNGAG00000005416	Pcbp3	71	81.503	Nannospalax_galili
ENSTNIG00000003546	zgc:110045	94	88.421	ENSNBRG00000017646	zgc:110045	70	88.421	Neolamprologus_brichardi
ENSTNIG00000003546	zgc:110045	85	81.503	ENSNLEG00000002639	PCBP3	81	79.503	Nomascus_leucogenys
ENSTNIG00000003546	zgc:110045	85	78.035	ENSODEG00000012873	PCBP3	71	78.035	Octodon_degus
ENSTNIG00000003546	zgc:110045	94	87.895	ENSONIG00000010370	zgc:110045	74	87.895	Oreochromis_niloticus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSOANG00000006265	PCBP3	60	81.503	Ornithorhynchus_anatinus
ENSTNIG00000003546	zgc:110045	94	86.842	ENSORLG00020003139	zgc:110045	76	83.684	Oryzias_latipes_hni
ENSTNIG00000003546	zgc:110045	85	76.301	ENSOARG00000012704	PCBP3	63	76.301	Ovis_aries
ENSTNIG00000003546	zgc:110045	85	81.503	ENSPPAG00000021940	PCBP3	81	79.503	Pan_paniscus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSPPRG00000003933	PCBP3	81	79.503	Panthera_pardus
ENSTNIG00000003546	zgc:110045	97	50.485	ENSPTIG00000012038	PCBP3	80	57.803	Panthera_tigris_altaica
ENSTNIG00000003546	zgc:110045	97	44.390	ENSPTRG00000014010	PCBP3	78	44.390	Pan_troglodytes
ENSTNIG00000003546	zgc:110045	85	81.503	ENSPANG00000023631	PCBP3	81	79.503	Papio_anubis
ENSTNIG00000003546	zgc:110045	85	59.538	ENSPMGG00000022531	-	76	59.538	Periophthalmus_magnuspinnatus
ENSTNIG00000003546	zgc:110045	78	87.421	ENSPMGG00000021588	-	52	87.421	Periophthalmus_magnuspinnatus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSPEMG00000000587	Pcbp3	71	81.503	Peromyscus_maniculatus_bairdii
ENSTNIG00000003546	zgc:110045	72	65.812	ENSPMAG00000004719	zgc:110045	88	65.812	Petromyzon_marinus
ENSTNIG00000003546	zgc:110045	96	86.082	ENSPFOG00000002348	zgc:110045	78	86.082	Poecilia_formosa
ENSTNIG00000003546	zgc:110045	96	82.474	ENSPLAG00000017488	zgc:110045	83	82.474	Poecilia_latipinna
ENSTNIG00000003546	zgc:110045	99	85.500	ENSPMEG00000012762	zgc:110045	86	85.500	Poecilia_mexicana
ENSTNIG00000003546	zgc:110045	96	85.567	ENSPREG00000001797	zgc:110045	84	85.567	Poecilia_reticulata
ENSTNIG00000003546	zgc:110045	79	86.250	ENSPPYG00000011525	-	59	86.250	Pongo_abelii
ENSTNIG00000003546	zgc:110045	85	80.925	ENSPCOG00000013797	PCBP3	81	78.882	Propithecus_coquereli
ENSTNIG00000003546	zgc:110045	96	83.505	ENSPNYG00000004637	zgc:110045	86	83.505	Pundamilia_nyererei
ENSTNIG00000003546	zgc:110045	93	79.365	ENSPNAG00000004501	zgc:110045	83	79.365	Pygocentrus_nattereri
ENSTNIG00000003546	zgc:110045	85	81.503	ENSRROG00000034567	PCBP3	81	79.503	Rhinopithecus_roxellana
ENSTNIG00000003546	zgc:110045	85	81.503	ENSSBOG00000005789	PCBP3	81	79.503	Saimiri_boliviensis_boliviensis
ENSTNIG00000003546	zgc:110045	96	85.567	ENSSMAG00000013541	zgc:110045	80	85.567	Scophthalmus_maximus
ENSTNIG00000003546	zgc:110045	67	78.832	ENSSARG00000007629	-	68	78.832	Sorex_araneus
ENSTNIG00000003546	zgc:110045	94	87.895	ENSSPAG00000000563	zgc:110045	57	87.895	Stegastes_partitus
ENSTNIG00000003546	zgc:110045	85	81.503	ENSSSCG00000023041	PCBP3	66	81.503	Sus_scrofa
ENSTNIG00000003546	zgc:110045	95	88.021	ENSTRUG00000017789	zgc:110045	93	88.021	Takifugu_rubripes
ENSTNIG00000003546	zgc:110045	73	60.403	ENSTBEG00000011882	-	53	55.491	Tupaia_belangeri
ENSTNIG00000003546	zgc:110045	85	78.035	ENSUAMG00000006491	PCBP3	92	82.443	Ursus_americanus
ENSTNIG00000003546	zgc:110045	85	71.591	ENSUMAG00000025403	PCBP3	72	71.591	Ursus_maritimus
ENSTNIG00000003546	zgc:110045	88	78.090	ENSXCOG00000005968	zgc:110045	88	78.090	Xiphophorus_couchianus
ENSTNIG00000003546	zgc:110045	94	87.895	ENSXMAG00000008030	zgc:110045	57	87.895	Xiphophorus_maculatus