EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000003560 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2826 bases
Position: chrUn_random:60036489-60039314
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006149	DEAD	PF00270.29	7.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006297	-	1434	-	ENSTNIP00000006149	478 (aa)	-	H3CD26

Gene Model

Click here to download ENSTNIG00000003560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000003560	-	77	34.933	ENSTNIG00000007821	eif4a2	92	34.933
ENSTNIG00000003560	-	77	30.851	ENSTNIG00000010081	ddx59	60	30.851
ENSTNIG00000003560	-	85	37.226	ENSTNIG00000007405	-	94	37.226
ENSTNIG00000003560	-	72	34.349	ENSTNIG00000012417	zgc:193690	78	33.898
ENSTNIG00000003560	-	90	30.309	ENSTNIG00000011569	-	68	30.309
ENSTNIG00000003560	-	79	36.939	ENSTNIG00000002924	eif4a3	91	36.939
ENSTNIG00000003560	-	70	38.983	ENSTNIG00000016309	ddx1	53	38.983
ENSTNIG00000003560	-	76	36.267	ENSTNIG00000005790	ddx19	76	36.267
ENSTNIG00000003560	-	65	31.761	ENSTNIG00000014514	-	78	31.761
ENSTNIG00000003560	-	81	34.171	ENSTNIG00000019425	ddx20	52	34.171
ENSTNIG00000003560	-	72	33.051	ENSTNIG00000009822	ddx43	60	33.051
ENSTNIG00000003560	-	67	31.003	ENSTNIG00000017834	ddx18	59	31.003
ENSTNIG00000003560	-	69	32.194	ENSTNIG00000013515	DDX55	58	32.194
ENSTNIG00000003560	-	72	30.337	ENSTNIG00000017510	DDX5	56	30.337
ENSTNIG00000003560	-	99	81.667	ENSTNIG00000016295	ddx6	99	81.649
ENSTNIG00000003560	-	56	38.745	ENSTNIG00000004408	-	93	38.745
ENSTNIG00000003560	-	73	36.752	ENSTNIG00000017079	-	99	36.752
ENSTNIG00000003560	-	72	32.861	ENSTNIG00000006247	-	67	32.861
ENSTNIG00000003560	-	77	39.459	ENSTNIG00000006865	-	96	39.295
ENSTNIG00000003560	-	77	32.973	ENSTNIG00000004366	-	92	32.973
ENSTNIG00000003560	-	54	30.070	ENSTNIG00000019621	ddx23	86	30.070
ENSTNIG00000003560	-	77	33.245	ENSTNIG00000010188	ddx49	79	33.245

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003560	-	98	86.624	ENSAPOG00000014829	ddx61	96	86.624	Acanthochromis_polyacanthus
ENSTNIG00000003560	-	76	94.536	ENSAPOG00000023627	-	93	94.536	Acanthochromis_polyacanthus
ENSTNIG00000003560	-	100	84.583	ENSACIG00000018355	-	98	84.583	Amphilophus_citrinellus
ENSTNIG00000003560	-	98	87.473	ENSAOCG00000007627	ddx61	96	87.473	Amphiprion_ocellaris
ENSTNIG00000003560	-	100	91.667	ENSAOCG00000006269	-	98	91.667	Amphiprion_ocellaris
ENSTNIG00000003560	-	100	91.667	ENSAPEG00000021368	-	98	91.667	Amphiprion_percula
ENSTNIG00000003560	-	100	91.667	ENSAPEG00000020642	-	98	91.667	Amphiprion_percula
ENSTNIG00000003560	-	98	87.473	ENSAPEG00000007293	ddx61	96	87.473	Amphiprion_percula
ENSTNIG00000003560	-	98	86.837	ENSATEG00000011302	ddx61	99	85.146	Anabas_testudineus
ENSTNIG00000003560	-	100	90.208	ENSATEG00000005424	-	98	90.208	Anabas_testudineus
ENSTNIG00000003560	-	100	91.250	ENSACLG00000003260	-	99	91.250	Astatotilapia_calliptera
ENSTNIG00000003560	-	99	85.983	ENSACLG00000027620	ddx61	99	85.983	Astatotilapia_calliptera
ENSTNIG00000003560	-	98	86.383	ENSAMXG00000032542	ddx61	98	85.774	Astyanax_mexicanus
ENSTNIG00000003560	-	99	87.010	ENSAMXG00000033980	-	98	87.010	Astyanax_mexicanus
ENSTNIG00000003560	-	100	91.667	ENSCSEG00000009893	-	98	91.667	Cynoglossus_semilaevis
ENSTNIG00000003560	-	100	89.375	ENSCVAG00000011006	-	98	89.375	Cyprinodon_variegatus
ENSTNIG00000003560	-	99	85.084	ENSDARG00000018425	ddx61	98	85.084	Danio_rerio
ENSTNIG00000003560	-	99	88.309	ENSELUG00000020545	ddx61	98	88.309	Esox_lucius
ENSTNIG00000003560	-	99	89.397	ENSELUG00000022538	-	98	89.397	Esox_lucius
ENSTNIG00000003560	-	100	89.167	ENSFHEG00000015487	-	98	89.167	Fundulus_heteroclitus
ENSTNIG00000003560	-	98	85.983	ENSGMOG00000013762	ddx61	98	85.983	Gadus_morhua
ENSTNIG00000003560	-	68	84.404	ENSGMOG00000003561	-	100	84.802	Gadus_morhua
ENSTNIG00000003560	-	100	88.773	ENSGAFG00000015865	-	98	88.773	Gambusia_affinis
ENSTNIG00000003560	-	100	82.892	ENSGACG00000003401	ddx61	100	82.892	Gasterosteus_aculeatus
ENSTNIG00000003560	-	100	91.892	ENSGACG00000002413	-	99	91.892	Gasterosteus_aculeatus
ENSTNIG00000003560	-	99	85.983	ENSHBUG00000017832	ddx61	99	85.983	Haplochromis_burtoni
ENSTNIG00000003560	-	100	91.250	ENSHBUG00000017033	-	99	91.250	Haplochromis_burtoni
ENSTNIG00000003560	-	98	83.333	ENSHCOG00000008184	ddx61	97	83.333	Hippocampus_comes
ENSTNIG00000003560	-	100	88.542	ENSHCOG00000012238	-	98	88.542	Hippocampus_comes
ENSTNIG00000003560	-	99	86.430	ENSIPUG00000008367	-	99	86.486	Ictalurus_punctatus
ENSTNIG00000003560	-	98	85.043	ENSIPUG00000012823	DDX6	99	84.100	Ictalurus_punctatus
ENSTNIG00000003560	-	100	91.441	ENSKMAG00000007213	-	99	91.441	Kryptolebias_marmoratus
ENSTNIG00000003560	-	100	90.965	ENSLBEG00000016890	-	98	90.965	Labrus_bergylta
ENSTNIG00000003560	-	99	85.924	ENSLBEG00000001740	ddx61	98	85.924	Labrus_bergylta
ENSTNIG00000003560	-	99	82.099	ENSLACG00000015214	ddx61	99	82.099	Latimeria_chalumnae
ENSTNIG00000003560	-	98	47.771	ENSLOCG00000004352	ddx61	94	47.983	Lepisosteus_oculatus
ENSTNIG00000003560	-	100	91.684	ENSMAMG00000005559	-	98	91.684	Mastacembelus_armatus
ENSTNIG00000003560	-	98	87.288	ENSMAMG00000005321	ddx61	96	87.288	Mastacembelus_armatus
ENSTNIG00000003560	-	99	85.983	ENSMZEG00005003556	ddx61	99	85.983	Maylandia_zebra
ENSTNIG00000003560	-	100	91.250	ENSMZEG00005026268	-	99	91.250	Maylandia_zebra
ENSTNIG00000003560	-	100	84.375	ENSMMOG00000013694	-	98	84.375	Mola_mola
ENSTNIG00000003560	-	74	77.054	ENSMMOG00000008825	-	99	71.469	Mola_mola
ENSTNIG00000003560	-	98	85.169	ENSMMOG00000007415	ddx61	97	85.169	Mola_mola
ENSTNIG00000003560	-	99	75.676	ENSMALG00000013776	ddx61	96	75.676	Monopterus_albus
ENSTNIG00000003560	-	100	90.833	ENSMALG00000013817	-	98	90.833	Monopterus_albus
ENSTNIG00000003560	-	100	84.167	ENSNBRG00000015075	-	98	84.167	Neolamprologus_brichardi
ENSTNIG00000003560	-	99	78.870	ENSNBRG00000015800	ddx61	98	78.870	Neolamprologus_brichardi
ENSTNIG00000003560	-	100	91.458	ENSONIG00000013748	-	99	91.458	Oreochromis_niloticus
ENSTNIG00000003560	-	99	85.774	ENSONIG00000011418	ddx61	99	85.774	Oreochromis_niloticus
ENSTNIG00000003560	-	100	89.583	ENSORLG00000009178	-	99	89.583	Oryzias_latipes
ENSTNIG00000003560	-	100	89.583	ENSORLG00020015515	-	99	89.583	Oryzias_latipes_hni
ENSTNIG00000003560	-	100	89.583	ENSORLG00015006764	-	99	89.583	Oryzias_latipes_hsok
ENSTNIG00000003560	-	98	81.876	ENSOMEG00000022326	-	98	81.876	Oryzias_melastigma
ENSTNIG00000003560	-	98	88.608	ENSPKIG00000024264	ddx61	98	87.734	Paramormyrops_kingsleyae
ENSTNIG00000003560	-	100	82.672	ENSPMGG00000013355	-	98	82.672	Periophthalmus_magnuspinnatus
ENSTNIG00000003560	-	100	89.353	ENSPFOG00000005750	-	98	89.353	Poecilia_formosa
ENSTNIG00000003560	-	100	89.353	ENSPLAG00000000403	-	98	89.353	Poecilia_latipinna
ENSTNIG00000003560	-	100	89.331	ENSPMEG00000023737	-	98	89.331	Poecilia_mexicana
ENSTNIG00000003560	-	99	79.806	ENSPNYG00000015045	ddx61	99	79.806	Pundamilia_nyererei
ENSTNIG00000003560	-	100	91.250	ENSPNYG00000003986	-	99	91.250	Pundamilia_nyererei
ENSTNIG00000003560	-	99	89.167	ENSPNAG00000008742	-	98	89.167	Pygocentrus_nattereri
ENSTNIG00000003560	-	100	85.477	ENSPNAG00000024072	ddx61	99	85.477	Pygocentrus_nattereri
ENSTNIG00000003560	-	98	88.397	ENSSFOG00015021404	ddx61	97	87.942	Scleropages_formosus
ENSTNIG00000003560	-	98	85.928	ENSSMAG00000006591	ddx61	96	85.319	Scophthalmus_maximus
ENSTNIG00000003560	-	100	90.625	ENSSMAG00000001793	-	98	90.625	Scophthalmus_maximus
ENSTNIG00000003560	-	98	88.486	ENSSDUG00000009713	ddx61	96	88.323	Seriola_dumerili
ENSTNIG00000003560	-	100	92.100	ENSSDUG00000007530	-	98	92.100	Seriola_dumerili
ENSTNIG00000003560	-	98	88.486	ENSSLDG00000000132	ddx61	96	88.323	Seriola_lalandi_dorsalis
ENSTNIG00000003560	-	100	92.100	ENSSLDG00000007608	-	98	92.100	Seriola_lalandi_dorsalis
ENSTNIG00000003560	-	100	92.292	ENSSPAG00000013878	-	98	92.292	Stegastes_partitus
ENSTNIG00000003560	-	98	88.248	ENSSPAG00000001578	ddx61	96	88.085	Stegastes_partitus
ENSTNIG00000003560	-	100	95.625	ENSTRUG00000012432	-	98	95.625	Takifugu_rubripes
ENSTNIG00000003560	-	100	80.042	ENSXCOG00000001406	-	98	80.042	Xiphophorus_couchianus
ENSTNIG00000003560	-	100	88.981	ENSXMAG00000016090	-	98	88.981	Xiphophorus_maculatus