EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000003570 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3363 bases
Position: chr2:2713586-2716948
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006160	2OG-FeII_Oxy	PF03171.20	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006308	-	1596	-	ENSTNIP00000006160	531 (aa)	-	H3CD37

Gene Model

Click here to download ENSTNIG00000003570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000003570	-	99	68.959	ENSTNIG00000017021	p4ha1b	99	68.959

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003570	-	76	63.591	ENSAPOG00000008101	p4ha1a	83	63.591	Acanthochromis_polyacanthus
ENSTNIG00000003570	-	99	76.792	ENSACIG00000014303	p4ha1a	99	76.880	Amphilophus_citrinellus
ENSTNIG00000003570	-	99	68.431	ENSAOCG00000005531	p4ha1a	98	68.431	Amphiprion_ocellaris
ENSTNIG00000003570	-	99	76.938	ENSAOCG00000005514	-	99	76.938	Amphiprion_ocellaris
ENSTNIG00000003570	-	99	76.371	ENSAPEG00000010462	-	99	76.371	Amphiprion_percula
ENSTNIG00000003570	-	99	70.599	ENSAMXG00000018364	p4ha1a	99	70.599	Astyanax_mexicanus
ENSTNIG00000003570	-	97	74.517	ENSCSEG00000001857	-	97	78.716	Cynoglossus_semilaevis
ENSTNIG00000003570	-	98	75.047	ENSCVAG00000020081	p4ha1a	98	75.047	Cyprinodon_variegatus
ENSTNIG00000003570	-	97	71.017	ENSDARG00000033537	p4ha1a	98	70.301	Danio_rerio
ENSTNIG00000003570	-	99	69.871	ENSELUG00000005174	p4ha1a	99	69.871	Esox_lucius
ENSTNIG00000003570	-	99	77.358	ENSMAMG00000010119	p4ha1a	99	77.358	Mastacembelus_armatus
ENSTNIG00000003570	-	98	77.863	ENSMMOG00000009210	-	98	77.863	Mola_mola
ENSTNIG00000003570	-	99	76.493	ENSMALG00000013083	-	99	80.872	Monopterus_albus
ENSTNIG00000003570	-	97	71.318	ENSORLG00000014906	-	92	71.318	Oryzias_latipes
ENSTNIG00000003570	-	98	73.996	ENSORLG00020015227	-	95	73.996	Oryzias_latipes_hni
ENSTNIG00000003570	-	98	74.187	ENSORLG00015012970	-	95	74.187	Oryzias_latipes_hsok
ENSTNIG00000003570	-	99	73.004	ENSOMEG00000019702	-	99	73.004	Oryzias_melastigma
ENSTNIG00000003570	-	99	70.377	ENSPKIG00000002519	p4ha1a	98	70.377	Paramormyrops_kingsleyae
ENSTNIG00000003570	-	98	75.803	ENSPREG00000016136	p4ha1a	98	75.992	Poecilia_reticulata
ENSTNIG00000003570	-	99	71.136	ENSPNAG00000025732	p4ha1a	99	71.322	Pygocentrus_nattereri
ENSTNIG00000003570	-	96	70.633	ENSSFOG00015009731	p4ha1	99	69.573	Scleropages_formosus