EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000003725 (Gene tree)
Gene ID: -
Gene Symbol: apex2
Alias: zgc:55889
Full Name: APEX nuclease (apurinic/apyrimidinic endonuclease) 2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2549 bases
Position: chrUn_random:61211895-61214443
Accession: ZDB-GENE-040426-835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002062	Exo_endo_phos	PF03372.23	2.6e-07	1	1
ENSTNIP00000001575	Exo_endo_phos	PF03372.23	4.3e-07	1	1
ENSTNIP00000006325	Exo_endo_phos	PF03372.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000001165	-	1338	-	ENSTNIP00000001575	446 (aa)	-	H3C009
ENSTNIT00000000520	-	1218	-	ENSTNIP00000002062	406 (aa)	-	H3C1E6
ENSTNIT00000006474	-	1428	-	ENSTNIP00000006325	475 (aa)	-	H3CDK2

Gene Model

Click here to download ENSTNIG00000003725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003725's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003725	apex2	100	45.952	ENSG00000169188	APEX2	81	45.952	Homo_sapiens
ENSTNIG00000003725	apex2	100	68.163	ENSAPOG00000005805	apex2	85	68.367	Acanthochromis_polyacanthus
ENSTNIG00000003725	apex2	100	45.606	ENSAMEG00000003608	APEX2	81	45.606	Ailuropoda_melanoleuca
ENSTNIG00000003725	apex2	100	68.432	ENSACIG00000010000	apex2	85	68.432	Amphilophus_citrinellus
ENSTNIG00000003725	apex2	100	67.755	ENSAOCG00000021774	apex2	85	67.959	Amphiprion_ocellaris
ENSTNIG00000003725	apex2	100	67.959	ENSAPEG00000020890	apex2	80	68.163	Amphiprion_percula
ENSTNIG00000003725	apex2	100	66.667	ENSATEG00000023600	apex2	85	66.667	Anabas_testudineus
ENSTNIG00000003725	apex2	99	49.157	ENSACAG00000011201	APEX2	82	49.157	Anolis_carolinensis
ENSTNIG00000003725	apex2	100	46.793	ENSANAG00000021907	-	81	46.793	Aotus_nancymaae
ENSTNIG00000003725	apex2	96	40.199	ENSANAG00000020845	-	79	40.199	Aotus_nancymaae
ENSTNIG00000003725	apex2	89	77.778	ENSAMXG00000007422	apex2	67	77.778	Astyanax_mexicanus
ENSTNIG00000003725	apex2	100	46.172	ENSBTAG00000013177	APEX2	81	46.172	Bos_taurus
ENSTNIG00000003725	apex2	100	46.336	ENSCJAG00000016584	APEX2	81	46.336	Callithrix_jacchus
ENSTNIG00000003725	apex2	100	45.498	ENSCAFG00000014310	APEX2	81	45.498	Canis_familiaris
ENSTNIG00000003725	apex2	100	45.647	ENSCAFG00020013818	APEX2	98	45.368	Canis_lupus_dingo
ENSTNIG00000003725	apex2	100	45.933	ENSCHIG00000019916	APEX2	81	45.933	Capra_hircus
ENSTNIG00000003725	apex2	100	49.161	ENSTSYG00000005612	APEX2	81	49.161	Carlito_syrichta
ENSTNIG00000003725	apex2	100	46.539	ENSCPOG00000007265	APEX2	81	46.539	Cavia_porcellus
ENSTNIG00000003725	apex2	99	41.346	ENSCCAG00000025405	-	82	41.346	Cebus_capucinus
ENSTNIG00000003725	apex2	100	45.714	ENSCATG00000044854	APEX2	81	45.714	Cercocebus_atys
ENSTNIG00000003725	apex2	99	46.318	ENSCLAG00000017315	APEX2	81	46.318	Chinchilla_lanigera
ENSTNIG00000003725	apex2	100	46.209	ENSCSAG00000012124	APEX2	81	46.209	Chlorocebus_sabaeus
ENSTNIG00000003725	apex2	100	47.343	ENSCPBG00000016631	APEX2	83	46.604	Chrysemys_picta_bellii
ENSTNIG00000003725	apex2	99	42.254	ENSCSAVG00000006052	-	82	57.576	Ciona_savignyi
ENSTNIG00000003725	apex2	100	46.190	ENSCANG00000003053	APEX2	81	46.190	Colobus_angolensis_palliatus
ENSTNIG00000003725	apex2	100	45.863	ENSCGRG00001008132	Apex2	81	45.863	Cricetulus_griseus_chok1gshd
ENSTNIG00000003725	apex2	100	45.863	ENSCGRG00000009667	Apex2	81	45.863	Cricetulus_griseus_crigri
ENSTNIG00000003725	apex2	96	70.667	ENSCSEG00000019900	apex2	84	62.249	Cynoglossus_semilaevis
ENSTNIG00000003725	apex2	100	59.920	ENSCVAG00000021583	apex2	85	60.956	Cyprinodon_variegatus
ENSTNIG00000003725	apex2	100	56.879	ENSDARG00000008472	apex2	87	56.879	Danio_rerio
ENSTNIG00000003725	apex2	100	46.572	ENSDNOG00000038901	APEX2	81	46.572	Dasypus_novemcinctus
ENSTNIG00000003725	apex2	99	45.742	ENSEBUG00000015654	apex2	100	40.192	Eptatretus_burgeri
ENSTNIG00000003725	apex2	100	46.523	ENSEASG00005011694	APEX2	74	46.523	Equus_asinus_asinus
ENSTNIG00000003725	apex2	100	46.523	ENSECAG00000026921	APEX2	74	46.523	Equus_caballus
ENSTNIG00000003725	apex2	100	47.202	ENSEEUG00000013172	APEX2	81	47.202	Erinaceus_europaeus
ENSTNIG00000003725	apex2	100	59.055	ENSELUG00000021417	apex2	85	59.200	Esox_lucius
ENSTNIG00000003725	apex2	100	45.433	ENSFCAG00000021990	APEX2	81	45.433	Felis_catus
ENSTNIG00000003725	apex2	100	46.336	ENSFDAG00000008076	APEX2	81	46.336	Fukomys_damarensis
ENSTNIG00000003725	apex2	100	57.787	ENSFHEG00000021411	apex2	84	58.263	Fundulus_heteroclitus
ENSTNIG00000003725	apex2	65	65.179	ENSGMOG00000019681	apex2	76	66.364	Gadus_morhua
ENSTNIG00000003725	apex2	100	64.990	ENSGAFG00000005829	apex2	85	64.386	Gambusia_affinis
ENSTNIG00000003725	apex2	58	81.111	ENSGACG00000012307	apex2	69	76.042	Gasterosteus_aculeatus
ENSTNIG00000003725	apex2	100	46.244	ENSGAGG00000011520	APEX2	82	46.244	Gopherus_agassizii
ENSTNIG00000003725	apex2	100	46.667	ENSGGOG00000002056	APEX2	81	46.667	Gorilla_gorilla
ENSTNIG00000003725	apex2	99	69.912	ENSHBUG00000009938	apex2	84	69.912	Haplochromis_burtoni
ENSTNIG00000003725	apex2	100	46.336	ENSHGLG00000000273	APEX2	81	46.336	Heterocephalus_glaber_female
ENSTNIG00000003725	apex2	99	62.187	ENSHCOG00000010165	apex2	84	62.061	Hippocampus_comes
ENSTNIG00000003725	apex2	92	78.082	ENSIPUG00000000352	APEX2	64	76.056	Ictalurus_punctatus
ENSTNIG00000003725	apex2	100	45.035	ENSSTOG00000025121	APEX2	81	45.735	Ictidomys_tridecemlineatus
ENSTNIG00000003725	apex2	100	46.353	ENSJJAG00000019611	Apex2	81	46.353	Jaculus_jaculus
ENSTNIG00000003725	apex2	100	67.284	ENSKMAG00000006985	apex2	85	67.284	Kryptolebias_marmoratus
ENSTNIG00000003725	apex2	100	68.699	ENSLBEG00000012139	apex2	85	68.699	Labrus_bergylta
ENSTNIG00000003725	apex2	89	55.062	ENSLACG00000000865	APEX2	76	55.062	Latimeria_chalumnae
ENSTNIG00000003725	apex2	100	54.268	ENSLOCG00000014467	apex2	85	55.578	Lepisosteus_oculatus
ENSTNIG00000003725	apex2	100	46.495	ENSLAFG00000018312	APEX2	81	46.495	Loxodonta_africana
ENSTNIG00000003725	apex2	100	46.318	ENSMFAG00000002486	APEX2	81	46.318	Macaca_fascicularis
ENSTNIG00000003725	apex2	100	46.318	ENSMMUG00000008428	APEX2	81	46.318	Macaca_mulatta
ENSTNIG00000003725	apex2	100	46.209	ENSMNEG00000036783	APEX2	81	46.209	Macaca_nemestrina
ENSTNIG00000003725	apex2	100	45.714	ENSMLEG00000028208	APEX2	81	45.714	Mandrillus_leucophaeus
ENSTNIG00000003725	apex2	100	65.800	ENSMAMG00000024220	apex2	85	65.800	Mastacembelus_armatus
ENSTNIG00000003725	apex2	99	69.469	ENSMZEG00005026322	apex2	88	66.458	Maylandia_zebra
ENSTNIG00000003725	apex2	99	44.630	ENSMICG00000043181	APEX2	81	44.630	Microcebus_murinus
ENSTNIG00000003725	apex2	100	44.681	ENSMOCG00000004339	Apex2	81	45.952	Microtus_ochrogaster
ENSTNIG00000003725	apex2	100	69.450	ENSMMOG00000017340	apex2	85	69.939	Mola_mola
ENSTNIG00000003725	apex2	99	52.404	ENSMODG00000005341	APEX2	81	52.404	Monodelphis_domestica
ENSTNIG00000003725	apex2	100	65.737	ENSMALG00000014179	apex2	85	65.737	Monopterus_albus
ENSTNIG00000003725	apex2	100	46.226	MGP_CAROLIEiJ_G0033484	Apex2	81	46.244	Mus_caroli
ENSTNIG00000003725	apex2	100	47.045	ENSMUSG00000025269	Apex2	81	47.045	Mus_musculus
ENSTNIG00000003725	apex2	100	46.479	MGP_PahariEiJ_G0032023	Apex2	81	46.479	Mus_pahari
ENSTNIG00000003725	apex2	100	46.698	MGP_SPRETEiJ_G0034654	Apex2	81	46.698	Mus_spretus
ENSTNIG00000003725	apex2	100	45.131	ENSMPUG00000003293	APEX2	81	45.131	Mustela_putorius_furo
ENSTNIG00000003725	apex2	100	45.902	ENSMLUG00000004562	-	81	45.902	Myotis_lucifugus
ENSTNIG00000003725	apex2	99	46.279	ENSMLUG00000016298	-	81	46.279	Myotis_lucifugus
ENSTNIG00000003725	apex2	100	46.353	ENSNGAG00000013576	Apex2	81	46.353	Nannospalax_galili
ENSTNIG00000003725	apex2	100	66.802	ENSNBRG00000010099	apex2	85	66.802	Neolamprologus_brichardi
ENSTNIG00000003725	apex2	70	49.123	ENSNLEG00000032067	-	75	49.123	Nomascus_leucogenys
ENSTNIG00000003725	apex2	99	68.750	ENSONIG00000016881	apex2	83	69.670	Oreochromis_niloticus
ENSTNIG00000003725	apex2	99	51.474	ENSOANG00000000689	-	86	52.232	Ornithorhynchus_anatinus
ENSTNIG00000003725	apex2	100	37.413	ENSOCUG00000000570	APEX2	81	37.413	Oryctolagus_cuniculus
ENSTNIG00000003725	apex2	100	62.526	ENSORLG00000014053	apex2	85	62.762	Oryzias_latipes
ENSTNIG00000003725	apex2	100	62.733	ENSORLG00020013253	apex2	85	62.971	Oryzias_latipes_hni
ENSTNIG00000003725	apex2	100	62.733	ENSORLG00015007515	apex2	85	62.971	Oryzias_latipes_hsok
ENSTNIG00000003725	apex2	100	66.318	ENSOMEG00000003655	apex2	85	66.318	Oryzias_melastigma
ENSTNIG00000003725	apex2	100	46.445	ENSOGAG00000007797	APEX2	81	46.445	Otolemur_garnettii
ENSTNIG00000003725	apex2	100	45.933	ENSOARG00000005742	APEX2	81	45.933	Ovis_aries
ENSTNIG00000003725	apex2	100	46.190	ENSPPAG00000035747	APEX2	81	46.190	Pan_paniscus
ENSTNIG00000003725	apex2	100	44.712	ENSPPRG00000002440	APEX2	81	44.712	Panthera_pardus
ENSTNIG00000003725	apex2	100	44.471	ENSPTIG00000021651	APEX2	81	44.471	Panthera_tigris_altaica
ENSTNIG00000003725	apex2	100	46.190	ENSPTRG00000021946	APEX2	81	46.190	Pan_troglodytes
ENSTNIG00000003725	apex2	100	45.714	ENSPANG00000003595	APEX2	81	45.714	Papio_anubis
ENSTNIG00000003725	apex2	100	58.178	ENSPKIG00000007752	apex2	85	58.884	Paramormyrops_kingsleyae
ENSTNIG00000003725	apex2	100	62.162	ENSPMGG00000009151	apex2	85	62.162	Periophthalmus_magnuspinnatus
ENSTNIG00000003725	apex2	100	45.902	ENSPEMG00000016475	Apex2	81	45.902	Peromyscus_maniculatus_bairdii
ENSTNIG00000003725	apex2	99	50.365	ENSPCIG00000007633	APEX2	80	51.843	Phascolarctos_cinereus
ENSTNIG00000003725	apex2	100	65.173	ENSPFOG00000000408	apex2	85	65.784	Poecilia_formosa
ENSTNIG00000003725	apex2	100	64.358	ENSPLAG00000023814	apex2	85	65.377	Poecilia_latipinna
ENSTNIG00000003725	apex2	100	64.386	ENSPMEG00000023222	apex2	85	64.990	Poecilia_mexicana
ENSTNIG00000003725	apex2	100	44.893	ENSPPYG00000020388	APEX2	81	44.893	Pongo_abelii
ENSTNIG00000003725	apex2	99	46.809	ENSPCOG00000016083	APEX2	81	46.809	Propithecus_coquereli
ENSTNIG00000003725	apex2	100	45.952	ENSPVAG00000007851	APEX2	90	45.952	Pteropus_vampyrus
ENSTNIG00000003725	apex2	100	66.191	ENSPNYG00000015698	apex2	85	66.667	Pundamilia_nyererei
ENSTNIG00000003725	apex2	99	76.056	ENSPNAG00000011666	apex2	75	76.056	Pygocentrus_nattereri
ENSTNIG00000003725	apex2	100	46.698	ENSRNOG00000000166	Apex2	81	46.698	Rattus_norvegicus
ENSTNIG00000003725	apex2	100	45.843	ENSRBIG00000036500	APEX2	81	45.843	Rhinopithecus_bieti
ENSTNIG00000003725	apex2	100	45.952	ENSRROG00000032674	APEX2	86	45.952	Rhinopithecus_roxellana
ENSTNIG00000003725	apex2	99	36.277	ENSSBOG00000003489	-	83	36.277	Saimiri_boliviensis_boliviensis
ENSTNIG00000003725	apex2	100	46.556	ENSSBOG00000030500	-	81	47.031	Saimiri_boliviensis_boliviensis
ENSTNIG00000003725	apex2	99	53.202	ENSSHAG00000007846	APEX2	81	53.202	Sarcophilus_harrisii
ENSTNIG00000003725	apex2	87	84.375	ENSSFOG00015010354	apex2	90	58.250	Scleropages_formosus
ENSTNIG00000003725	apex2	100	66.871	ENSSMAG00000012753	apex2	85	66.874	Scophthalmus_maximus
ENSTNIG00000003725	apex2	100	69.520	ENSSDUG00000022892	apex2	85	69.639	Seriola_dumerili
ENSTNIG00000003725	apex2	99	70.796	ENSSLDG00000024347	apex2	84	70.796	Seriola_lalandi_dorsalis
ENSTNIG00000003725	apex2	99	46.190	ENSSARG00000010297	APEX2	80	46.190	Sorex_araneus
ENSTNIG00000003725	apex2	100	68.916	ENSSPAG00000016279	apex2	85	68.916	Stegastes_partitus
ENSTNIG00000003725	apex2	100	47.494	ENSSSCG00000012348	-	87	47.494	Sus_scrofa
ENSTNIG00000003725	apex2	100	78.306	ENSTRUG00000015660	apex2	85	78.306	Takifugu_rubripes
ENSTNIG00000003725	apex2	100	46.667	ENSTBEG00000010520	APEX2	90	46.667	Tupaia_belangeri
ENSTNIG00000003725	apex2	100	46.172	ENSUAMG00000004720	APEX2	98	46.172	Ursus_americanus
ENSTNIG00000003725	apex2	100	42.823	ENSUMAG00000002892	APEX2	82	44.837	Ursus_maritimus
ENSTNIG00000003725	apex2	100	45.991	ENSVVUG00000005989	APEX2	81	45.991	Vulpes_vulpes
ENSTNIG00000003725	apex2	99	54.102	ENSXETG00000022026	apex2	83	54.102	Xenopus_tropicalis
ENSTNIG00000003725	apex2	100	63.211	ENSXMAG00000025740	apex2	85	63.618	Xiphophorus_maculatus