EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000003825 (Gene tree)
Gene ID: -
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 21281 bases
Position: chr5:667536-688816
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006426	BRK	PF07533.16	6.6e-19	1	1
ENSTNIP00000022993	BRK	PF07533.16	6.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000023235	-	4977	-	ENSTNIP00000022993	1659 (aa)	-	H3DR44
ENSTNIT00000006575	-	4968	-	ENSTNIP00000006426	1656 (aa)	-	H3CDV2

Gene Model

Click here to download ENSTNIG00000003825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003825's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000003825	chd9	77	77.670	ENSTNIG00000007932	chd8	55	77.670
ENSTNIG00000003825	chd9	71	74.545	ENSTNIG00000017487	chd6	55	74.886
ENSTNIG00000003825	chd9	98	48.764	ENSTNIG00000002647	chd7	92	48.764

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003825	chd9	56	81.951	ENSG00000177200	CHD9	83	81.915	Homo_sapiens
ENSTNIG00000003825	chd9	84	99.408	ENSAPOG00000023034	chd9	77	70.023	Acanthochromis_polyacanthus
ENSTNIG00000003825	chd9	85	81.951	ENSAMEG00000016232	CHD9	57	81.951	Ailuropoda_melanoleuca
ENSTNIG00000003825	chd9	83	87.081	ENSACIG00000004097	chd9	55	87.081	Amphilophus_citrinellus
ENSTNIG00000003825	chd9	84	99.408	ENSAOCG00000005487	chd9	78	69.794	Amphiprion_ocellaris
ENSTNIG00000003825	chd9	84	99.408	ENSAPEG00000009859	chd9	77	69.794	Amphiprion_percula
ENSTNIG00000003825	chd9	97	70.481	ENSATEG00000002748	chd9	66	70.481	Anabas_testudineus
ENSTNIG00000003825	chd9	89	83.902	ENSAPLG00000002826	CHD9	57	83.902	Anas_platyrhynchos
ENSTNIG00000003825	chd9	88	83.902	ENSACAG00000016150	CHD9	53	83.902	Anolis_carolinensis
ENSTNIG00000003825	chd9	85	81.951	ENSANAG00000015630	CHD9	75	66.901	Aotus_nancymaae
ENSTNIG00000003825	chd9	87	87.081	ENSACLG00000016899	chd9	57	87.081	Astatotilapia_calliptera
ENSTNIG00000003825	chd9	87	83.486	ENSAMXG00000005652	chd9	69	83.486	Astyanax_mexicanus
ENSTNIG00000003825	chd9	86	81.951	ENSBTAG00000002287	CHD9	57	81.951	Bos_taurus
ENSTNIG00000003825	chd9	96	63.318	ENSCJAG00000001573	CHD9	75	67.254	Callithrix_jacchus
ENSTNIG00000003825	chd9	85	81.951	ENSCAFG00000009699	CHD9	57	81.951	Canis_familiaris
ENSTNIG00000003825	chd9	85	81.951	ENSCAFG00020002879	CHD9	75	68.310	Canis_lupus_dingo
ENSTNIG00000003825	chd9	89	81.951	ENSCHIG00000021000	CHD9	56	81.951	Capra_hircus
ENSTNIG00000003825	chd9	87	81.951	ENSTSYG00000007693	CHD9	74	67.606	Carlito_syrichta
ENSTNIG00000003825	chd9	54	55.782	ENSCAPG00000011604	CHD9	51	52.429	Cavia_aperea
ENSTNIG00000003825	chd9	85	81.951	ENSCPOG00000036544	CHD9	56	81.951	Cavia_porcellus
ENSTNIG00000003825	chd9	85	81.951	ENSCCAG00000036178	CHD9	75	67.958	Cebus_capucinus
ENSTNIG00000003825	chd9	85	81.951	ENSCATG00000036753	CHD9	75	67.958	Cercocebus_atys
ENSTNIG00000003825	chd9	85	81.951	ENSCLAG00000007137	CHD9	68	94.737	Chinchilla_lanigera
ENSTNIG00000003825	chd9	85	81.951	ENSCSAG00000005311	CHD9	57	81.951	Chlorocebus_sabaeus
ENSTNIG00000003825	chd9	87	83.902	ENSCPBG00000012459	CHD9	60	83.902	Chrysemys_picta_bellii
ENSTNIG00000003825	chd9	85	81.951	ENSCANG00000030349	CHD9	75	67.958	Colobus_angolensis_palliatus
ENSTNIG00000003825	chd9	97	62.850	ENSCGRG00001016150	Chd9	66	62.850	Cricetulus_griseus_chok1gshd
ENSTNIG00000003825	chd9	97	62.850	ENSCGRG00000012850	Chd9	68	94.737	Cricetulus_griseus_crigri
ENSTNIG00000003825	chd9	84	98.817	ENSCSEG00000009209	chd9	67	85.238	Cynoglossus_semilaevis
ENSTNIG00000003825	chd9	86	86.603	ENSCVAG00000016195	chd9	57	86.603	Cyprinodon_variegatus
ENSTNIG00000003825	chd9	89	83.645	ENSDARG00000074498	chd9	68	83.645	Danio_rerio
ENSTNIG00000003825	chd9	92	82.439	ENSDNOG00000006045	CHD9	71	82.439	Dasypus_novemcinctus
ENSTNIG00000003825	chd9	81	54.118	ENSDORG00000008523	-	82	54.118	Dipodomys_ordii
ENSTNIG00000003825	chd9	92	81.951	ENSEASG00005014832	CHD9	76	81.951	Equus_asinus_asinus
ENSTNIG00000003825	chd9	85	82.439	ENSECAG00000011505	CHD9	57	82.439	Equus_caballus
ENSTNIG00000003825	chd9	87	84.878	ENSELUG00000006031	chd9	76	66.895	Esox_lucius
ENSTNIG00000003825	chd9	86	81.951	ENSFCAG00000022534	CHD9	74	68.662	Felis_catus
ENSTNIG00000003825	chd9	85	83.902	ENSFALG00000013276	CHD9	68	83.902	Ficedula_albicollis
ENSTNIG00000003825	chd9	85	81.951	ENSFDAG00000021037	CHD9	57	81.951	Fukomys_damarensis
ENSTNIG00000003825	chd9	84	98.817	ENSFHEG00000006068	chd9	67	86.603	Fundulus_heteroclitus
ENSTNIG00000003825	chd9	87	65.525	ENSGMOG00000006040	chd9	66	65.525	Gadus_morhua
ENSTNIG00000003825	chd9	87	83.902	ENSGALG00000039178	CHD9	59	83.902	Gallus_gallus
ENSTNIG00000003825	chd9	85	98.817	ENSGAFG00000010014	chd9	76	69.676	Gambusia_affinis
ENSTNIG00000003825	chd9	88	85.646	ENSGACG00000016694	chd9	79	68.650	Gasterosteus_aculeatus
ENSTNIG00000003825	chd9	87	81.951	ENSGGOG00000014816	CHD9	75	67.606	Gorilla_gorilla
ENSTNIG00000003825	chd9	87	87.081	ENSHBUG00000023322	chd9	74	80.822	Haplochromis_burtoni
ENSTNIG00000003825	chd9	87	81.951	ENSHGLG00000014938	CHD9	68	94.737	Heterocephalus_glaber_female
ENSTNIG00000003825	chd9	98	68.950	ENSHCOG00000000937	chd9	79	68.721	Hippocampus_comes
ENSTNIG00000003825	chd9	89	83.486	ENSIPUG00000016448	chd9	76	75.524	Ictalurus_punctatus
ENSTNIG00000003825	chd9	85	80.476	ENSSTOG00000022273	CHD9	68	92.614	Ictidomys_tridecemlineatus
ENSTNIG00000003825	chd9	76	81.463	ENSJJAG00000015741	-	76	81.463	Jaculus_jaculus
ENSTNIG00000003825	chd9	98	69.794	ENSKMAG00000016784	chd9	77	69.794	Kryptolebias_marmoratus
ENSTNIG00000003825	chd9	84	99.408	ENSLBEG00000012077	chd9	77	68.894	Labrus_bergylta
ENSTNIG00000003825	chd9	83	82.439	ENSLACG00000005557	CHD9	55	82.439	Latimeria_chalumnae
ENSTNIG00000003825	chd9	89	83.810	ENSLOCG00000007225	chd9	67	85.366	Lepisosteus_oculatus
ENSTNIG00000003825	chd9	85	81.951	ENSLAFG00000015374	CHD9	57	81.951	Loxodonta_africana
ENSTNIG00000003825	chd9	92	81.951	ENSMFAG00000041354	CHD9	75	81.951	Macaca_fascicularis
ENSTNIG00000003825	chd9	85	81.951	ENSMMUG00000016310	CHD9	75	67.958	Macaca_mulatta
ENSTNIG00000003825	chd9	85	81.951	ENSMNEG00000031494	CHD9	61	81.951	Macaca_nemestrina
ENSTNIG00000003825	chd9	85	81.951	ENSMLEG00000043219	CHD9	75	67.958	Mandrillus_leucophaeus
ENSTNIG00000003825	chd9	84	99.408	ENSMAMG00000003909	chd9	56	87.081	Mastacembelus_armatus
ENSTNIG00000003825	chd9	85	99.408	ENSMZEG00005006581	chd9	67	87.081	Maylandia_zebra
ENSTNIG00000003825	chd9	89	83.902	ENSMGAG00000004642	CHD9	58	83.902	Meleagris_gallopavo
ENSTNIG00000003825	chd9	86	79.439	ENSMICG00000016679	CHD9	75	68.310	Microcebus_murinus
ENSTNIG00000003825	chd9	87	85.981	ENSMMOG00000016406	chd9	57	85.981	Mola_mola
ENSTNIG00000003825	chd9	80	83.902	ENSMODG00000013142	-	69	83.902	Monodelphis_domestica
ENSTNIG00000003825	chd9	97	71.005	ENSMALG00000013306	chd9	65	71.005	Monopterus_albus
ENSTNIG00000003825	chd9	96	62.150	MGP_CAROLIEiJ_G0031364	Chd9	65	62.150	Mus_caroli
ENSTNIG00000003825	chd9	97	62.150	ENSMUSG00000056608	Chd9	68	94.737	Mus_musculus
ENSTNIG00000003825	chd9	96	62.150	MGP_PahariEiJ_G0022964	Chd9	65	62.150	Mus_pahari
ENSTNIG00000003825	chd9	96	62.150	MGP_SPRETEiJ_G0032483	Chd9	66	62.150	Mus_spretus
ENSTNIG00000003825	chd9	85	81.951	ENSMPUG00000003285	CHD9	57	81.951	Mustela_putorius_furo
ENSTNIG00000003825	chd9	85	81.951	ENSMLUG00000004456	CHD9	57	81.951	Myotis_lucifugus
ENSTNIG00000003825	chd9	85	99.408	ENSNBRG00000009423	chd9	67	85.377	Neolamprologus_brichardi
ENSTNIG00000003825	chd9	83	82.439	ENSNLEG00000001026	CHD9	60	82.439	Nomascus_leucogenys
ENSTNIG00000003825	chd9	98	62.617	ENSODEG00000004466	CHD9	66	62.617	Octodon_degus
ENSTNIG00000003825	chd9	84	99.408	ENSONIG00000002816	chd9	69	85.377	Oreochromis_niloticus
ENSTNIG00000003825	chd9	85	83.902	ENSOANG00000013401	CHD9	57	83.902	Ornithorhynchus_anatinus
ENSTNIG00000003825	chd9	91	82.439	ENSOCUG00000001016	CHD9	73	82.439	Oryctolagus_cuniculus
ENSTNIG00000003825	chd9	84	98.817	ENSORLG00000013810	chd9	68	86.124	Oryzias_latipes
ENSTNIG00000003825	chd9	86	86.124	ENSORLG00020020665	chd9	57	86.124	Oryzias_latipes_hni
ENSTNIG00000003825	chd9	84	98.817	ENSORLG00015019126	chd9	67	84.434	Oryzias_latipes_hsok
ENSTNIG00000003825	chd9	96	63.084	ENSOGAG00000002110	CHD9	57	82.439	Otolemur_garnettii
ENSTNIG00000003825	chd9	85	81.951	ENSOARG00000017664	CHD9	57	81.951	Ovis_aries
ENSTNIG00000003825	chd9	94	81.951	ENSPPAG00000039388	-	75	81.951	Pan_paniscus
ENSTNIG00000003825	chd9	85	81.951	ENSPPRG00000004801	CHD9	74	68.310	Panthera_pardus
ENSTNIG00000003825	chd9	86	81.951	ENSPTIG00000021854	CHD9	57	81.951	Panthera_tigris_altaica
ENSTNIG00000003825	chd9	87	81.951	ENSPTRG00000008113	CHD9	75	67.606	Pan_troglodytes
ENSTNIG00000003825	chd9	92	81.951	ENSPANG00000019307	CHD9	74	81.951	Papio_anubis
ENSTNIG00000003825	chd9	87	83.415	ENSPKIG00000025401	-	59	83.415	Paramormyrops_kingsleyae
ENSTNIG00000003825	chd9	84	97.661	ENSPKIG00000021876	chd9	56	97.661	Paramormyrops_kingsleyae
ENSTNIG00000003825	chd9	59	71.875	ENSPMAG00000006035	-	73	47.917	Petromyzon_marinus
ENSTNIG00000003825	chd9	85	83.902	ENSPCIG00000017215	CHD9	74	83.902	Phascolarctos_cinereus
ENSTNIG00000003825	chd9	83	98.817	ENSPFOG00000015839	chd9	55	84.906	Poecilia_formosa
ENSTNIG00000003825	chd9	85	98.817	ENSPLAG00000011118	chd9	76	69.444	Poecilia_latipinna
ENSTNIG00000003825	chd9	86	86.603	ENSPMEG00000015106	chd9	56	86.603	Poecilia_mexicana
ENSTNIG00000003825	chd9	84	98.817	ENSPREG00000006473	chd9	67	84.906	Poecilia_reticulata
ENSTNIG00000003825	chd9	87	81.951	ENSPPYG00000007348	CHD9	57	81.951	Pongo_abelii
ENSTNIG00000003825	chd9	71	82.927	ENSPCAG00000007564	CHD9	51	82.927	Procavia_capensis
ENSTNIG00000003825	chd9	92	79.439	ENSPCOG00000028433	CHD9	75	67.606	Propithecus_coquereli
ENSTNIG00000003825	chd9	79	76.613	ENSPVAG00000015617	CHD9	53	76.613	Pteropus_vampyrus
ENSTNIG00000003825	chd9	84	99.408	ENSPNYG00000010947	chd9	67	85.377	Pundamilia_nyererei
ENSTNIG00000003825	chd9	86	84.259	ENSPNAG00000024141	chd9	68	83.028	Pygocentrus_nattereri
ENSTNIG00000003825	chd9	83	81.951	ENSRNOG00000049302	Chd9	60	81.951	Rattus_norvegicus
ENSTNIG00000003825	chd9	90	81.951	ENSRBIG00000035553	CHD9	73	81.951	Rhinopithecus_bieti
ENSTNIG00000003825	chd9	92	81.951	ENSRROG00000033278	CHD9	75	81.951	Rhinopithecus_roxellana
ENSTNIG00000003825	chd9	85	81.951	ENSSBOG00000030240	CHD9	75	67.254	Saimiri_boliviensis_boliviensis
ENSTNIG00000003825	chd9	85	83.902	ENSSHAG00000002719	CHD9	57	83.902	Sarcophilus_harrisii
ENSTNIG00000003825	chd9	85	98.246	ENSSFOG00015020209	chd9	57	98.246	Scleropages_formosus
ENSTNIG00000003825	chd9	88	82.938	ENSSFOG00015001327	chd9	67	82.938	Scleropages_formosus
ENSTNIG00000003825	chd9	84	99.408	ENSSMAG00000008953	chd9	77	68.192	Scophthalmus_maximus
ENSTNIG00000003825	chd9	84	99.408	ENSSDUG00000006139	chd9	77	69.794	Seriola_dumerili
ENSTNIG00000003825	chd9	84	99.408	ENSSLDG00000017818	chd9	77	69.794	Seriola_lalandi_dorsalis
ENSTNIG00000003825	chd9	80	84.946	ENSSARG00000010632	CHD9	54	84.946	Sorex_araneus
ENSTNIG00000003825	chd9	84	99.408	ENSSPAG00000021649	chd9	77	69.863	Stegastes_partitus
ENSTNIG00000003825	chd9	87	81.951	ENSSSCG00000033591	CHD9	56	81.951	Sus_scrofa
ENSTNIG00000003825	chd9	84	83.495	ENSTGUG00000007476	CHD9	61	83.495	Taeniopygia_guttata
ENSTNIG00000003825	chd9	57	83.810	ENSTRUG00000009125	chd9	56	83.810	Takifugu_rubripes
ENSTNIG00000003825	chd9	81	81.951	ENSTTRG00000012674	CHD9	50	81.951	Tursiops_truncatus
ENSTNIG00000003825	chd9	70	53.546	ENSUAMG00000022706	CHD9	75	68.310	Ursus_americanus
ENSTNIG00000003825	chd9	83	81.951	ENSUMAG00000004043	CHD9	73	81.951	Ursus_maritimus
ENSTNIG00000003825	chd9	92	60.606	ENSVPAG00000001374	CHD9	63	60.606	Vicugna_pacos
ENSTNIG00000003825	chd9	85	81.951	ENSVVUG00000019435	CHD9	57	81.951	Vulpes_vulpes
ENSTNIG00000003825	chd9	85	82.927	ENSXETG00000000349	chd9	57	82.927	Xenopus_tropicalis
ENSTNIG00000003825	chd9	87	86.603	ENSXCOG00000012997	chd9	76	69.676	Xiphophorus_couchianus
ENSTNIG00000003825	chd9	85	98.817	ENSXMAG00000016192	chd9	79	69.676	Xiphophorus_maculatus