EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000003834 (Gene tree)
Gene ID: -
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcription repressor
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1956 bases
Position: chr4:9304264-9306219
Accession: ZDB-GENE-091118-129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006436	zf-C2H2	PF00096.26	1.6e-25	1	5
ENSTNIP00000006436	zf-C2H2	PF00096.26	1.6e-25	2	5
ENSTNIP00000006436	zf-C2H2	PF00096.26	1.6e-25	3	5
ENSTNIP00000006436	zf-C2H2	PF00096.26	1.6e-25	4	5
ENSTNIP00000006436	zf-C2H2	PF00096.26	1.6e-25	5	5
ENSTNIP00000006436	zf-met	PF12874.7	8.9e-08	1	2
ENSTNIP00000006436	zf-met	PF12874.7	8.9e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006585	-	984	-	ENSTNIP00000006436	327 (aa)	-	H3CDW2

Gene Model

Click here to download ENSTNIG00000003834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000003834	gfi1b	52	39.344	ENSTNIG00000001921	-	53	39.344
ENSTNIG00000003834	gfi1b	53	43.713	ENSTNIG00000000330	-	100	43.713
ENSTNIG00000003834	gfi1b	50	44.776	ENSTNIG00000000277	-	92	44.776
ENSTNIG00000003834	gfi1b	68	43.750	ENSTNIG00000008242	-	99	43.750
ENSTNIG00000003834	gfi1b	55	36.810	ENSTNIG00000000073	znf646	99	36.810
ENSTNIG00000003834	gfi1b	53	38.788	ENSTNIG00000005901	prdm5	68	38.788
ENSTNIG00000003834	gfi1b	58	40.179	ENSTNIG00000011367	znf710b	52	40.179
ENSTNIG00000003834	gfi1b	55	43.452	ENSTNIG00000018984	-	98	43.452
ENSTNIG00000003834	gfi1b	58	42.945	ENSTNIG00000005023	-	99	44.361
ENSTNIG00000003834	gfi1b	50	52.000	ENSTNIG00000003479	-	100	52.000
ENSTNIG00000003834	gfi1b	58	42.857	ENSTNIG00000002344	-	99	42.857
ENSTNIG00000003834	gfi1b	66	39.130	ENSTNIG00000002343	-	84	39.130
ENSTNIG00000003834	gfi1b	52	40.719	ENSTNIG00000000528	-	96	40.719
ENSTNIG00000003834	gfi1b	54	39.326	ENSTNIG00000005479	-	99	39.326
ENSTNIG00000003834	gfi1b	56	45.122	ENSTNIG00000000320	-	99	45.122
ENSTNIG00000003834	gfi1b	53	41.071	ENSTNIG00000018384	scrt1b	50	41.071
ENSTNIG00000003834	gfi1b	100	32.317	ENSTNIG00000003865	-	98	32.000
ENSTNIG00000003834	gfi1b	68	41.497	ENSTNIG00000005798	zbtb16a	52	41.497
ENSTNIG00000003834	gfi1b	54	40.625	ENSTNIG00000010722	GZF1	50	40.625
ENSTNIG00000003834	gfi1b	53	37.956	ENSTNIG00000008504	snai2	54	37.956
ENSTNIG00000003834	gfi1b	53	48.750	ENSTNIG00000003979	-	99	48.750
ENSTNIG00000003834	gfi1b	51	40.909	ENSTNIG00000008200	-	93	39.759
ENSTNIG00000003834	gfi1b	52	40.816	ENSTNIG00000005051	znf341	59	40.816
ENSTNIG00000003834	gfi1b	59	44.361	ENSTNIG00000003880	znf319b	85	44.361
ENSTNIG00000003834	gfi1b	61	38.889	ENSTNIG00000008100	-	99	38.889
ENSTNIG00000003834	gfi1b	100	52.604	ENSTNIG00000000651	gfi1ab	97	53.403
ENSTNIG00000003834	gfi1b	57	43.750	ENSTNIG00000008154	-	94	39.394
ENSTNIG00000003834	gfi1b	52	42.500	ENSTNIG00000001164	ZNF628	97	42.500
ENSTNIG00000003834	gfi1b	51	46.774	ENSTNIG00000000934	-	98	46.774
ENSTNIG00000003834	gfi1b	71	33.918	ENSTNIG00000009831	-	96	38.509
ENSTNIG00000003834	gfi1b	51	40.187	ENSTNIG00000017000	-	100	40.000
ENSTNIG00000003834	gfi1b	53	36.607	ENSTNIG00000001159	si:dkey-89b17.4	99	36.607
ENSTNIG00000003834	gfi1b	52	50.926	ENSTNIG00000005856	-	99	50.926
ENSTNIG00000003834	gfi1b	52	41.718	ENSTNIG00000011188	-	98	41.718
ENSTNIG00000003834	gfi1b	58	39.759	ENSTNIG00000019069	-	99	39.759
ENSTNIG00000003834	gfi1b	57	37.126	ENSTNIG00000012449	zbtb48	50	37.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003834	gfi1b	100	76.524	ENSAPOG00000001296	gfi1b	100	76.524	Acanthochromis_polyacanthus
ENSTNIG00000003834	gfi1b	99	69.113	ENSACIG00000002190	gfi1b	99	69.113	Amphilophus_citrinellus
ENSTNIG00000003834	gfi1b	100	76.220	ENSAOCG00000021187	gfi1b	100	76.220	Amphiprion_ocellaris
ENSTNIG00000003834	gfi1b	100	76.220	ENSAPEG00000016196	gfi1b	100	76.220	Amphiprion_percula
ENSTNIG00000003834	gfi1b	100	78.485	ENSATEG00000002534	gfi1b	100	78.485	Anabas_testudineus
ENSTNIG00000003834	gfi1b	100	58.580	ENSAPLG00000003373	GFI1B	100	58.580	Anas_platyrhynchos
ENSTNIG00000003834	gfi1b	99	72.866	ENSACLG00000027053	gfi1b	99	72.866	Astatotilapia_calliptera
ENSTNIG00000003834	gfi1b	100	69.733	ENSAMXG00000037544	GFI1B	100	69.733	Astyanax_mexicanus
ENSTNIG00000003834	gfi1b	100	58.133	ENSCAPG00000010404	GFI1B	100	58.133	Cavia_aperea
ENSTNIG00000003834	gfi1b	100	56.936	ENSCPBG00000021186	GFI1B	100	56.936	Chrysemys_picta_bellii
ENSTNIG00000003834	gfi1b	100	75.152	ENSCSEG00000001315	gfi1b	100	75.152	Cynoglossus_semilaevis
ENSTNIG00000003834	gfi1b	100	71.988	ENSCVAG00000017168	gfi1b	100	71.988	Cyprinodon_variegatus
ENSTNIG00000003834	gfi1b	100	66.276	ENSDARG00000079947	gfi1b	99	81.013	Danio_rerio
ENSTNIG00000003834	gfi1b	67	48.858	ENSEEUG00000012609	-	96	48.858	Erinaceus_europaeus
ENSTNIG00000003834	gfi1b	100	68.546	ENSELUG00000016933	gfi1b	100	68.546	Esox_lucius
ENSTNIG00000003834	gfi1b	100	54.795	ENSFALG00000001479	GFI1B	100	54.795	Ficedula_albicollis
ENSTNIG00000003834	gfi1b	100	75.224	ENSFHEG00000015138	gfi1b	100	75.224	Fundulus_heteroclitus
ENSTNIG00000003834	gfi1b	73	80.913	ENSGMOG00000019123	gfi1b	91	80.913	Gadus_morhua
ENSTNIG00000003834	gfi1b	100	58.407	ENSGALG00000003478	GFI1B	100	58.407	Gallus_gallus
ENSTNIG00000003834	gfi1b	71	90.476	ENSGAFG00000003059	gfi1b	99	90.476	Gambusia_affinis
ENSTNIG00000003834	gfi1b	100	71.591	ENSGACG00000018134	gfi1b	100	71.591	Gasterosteus_aculeatus
ENSTNIG00000003834	gfi1b	100	58.284	ENSGAGG00000021327	GFI1B	100	58.284	Gopherus_agassizii
ENSTNIG00000003834	gfi1b	99	72.866	ENSHBUG00000005451	gfi1b	99	72.866	Haplochromis_burtoni
ENSTNIG00000003834	gfi1b	100	73.780	ENSHCOG00000013713	gfi1b	100	73.780	Hippocampus_comes
ENSTNIG00000003834	gfi1b	100	70.149	ENSIPUG00000012769	gfi1b	100	70.149	Ictalurus_punctatus
ENSTNIG00000003834	gfi1b	99	53.908	ENSJJAG00000016355	Gfi1b	100	53.908	Jaculus_jaculus
ENSTNIG00000003834	gfi1b	100	74.775	ENSKMAG00000016047	gfi1b	100	74.775	Kryptolebias_marmoratus
ENSTNIG00000003834	gfi1b	100	76.807	ENSLBEG00000020297	gfi1b	99	76.807	Labrus_bergylta
ENSTNIG00000003834	gfi1b	100	58.806	ENSLACG00000012207	GFI1B	100	58.806	Latimeria_chalumnae
ENSTNIG00000003834	gfi1b	100	65.075	ENSLOCG00000005750	gfi1b	100	65.075	Lepisosteus_oculatus
ENSTNIG00000003834	gfi1b	100	58.333	ENSLAFG00000022367	GFI1B	100	58.631	Loxodonta_africana
ENSTNIG00000003834	gfi1b	100	81.459	ENSMAMG00000003040	gfi1b	100	81.459	Mastacembelus_armatus
ENSTNIG00000003834	gfi1b	99	72.561	ENSMZEG00005015594	gfi1b	99	72.561	Maylandia_zebra
ENSTNIG00000003834	gfi1b	100	58.407	ENSMGAG00000006129	GFI1B	100	58.407	Meleagris_gallopavo
ENSTNIG00000003834	gfi1b	100	80.909	ENSMMOG00000011764	gfi1b	100	80.909	Mola_mola
ENSTNIG00000003834	gfi1b	100	52.747	ENSMODG00000012600	GFI1B	100	52.747	Monodelphis_domestica
ENSTNIG00000003834	gfi1b	100	79.635	ENSMALG00000004034	gfi1b	100	79.635	Monopterus_albus
ENSTNIG00000003834	gfi1b	100	57.229	ENSNGAG00000003333	Gfi1b	100	58.006	Nannospalax_galili
ENSTNIG00000003834	gfi1b	51	67.164	ENSNBRG00000012376	-	99	67.164	Neolamprologus_brichardi
ENSTNIG00000003834	gfi1b	99	72.948	ENSNBRG00000012391	gfi1b	99	72.948	Neolamprologus_brichardi
ENSTNIG00000003834	gfi1b	99	73.252	ENSONIG00000013011	gfi1b	94	92.179	Oreochromis_niloticus
ENSTNIG00000003834	gfi1b	100	59.941	ENSOANG00000014723	GFI1B	100	59.941	Ornithorhynchus_anatinus
ENSTNIG00000003834	gfi1b	100	60.366	ENSORLG00000014390	GFI1B	96	68.953	Oryzias_latipes
ENSTNIG00000003834	gfi1b	100	74.772	ENSORLG00020003719	GFI1B	100	74.772	Oryzias_latipes_hni
ENSTNIG00000003834	gfi1b	100	74.468	ENSORLG00015017142	gfi1b	100	74.468	Oryzias_latipes_hsok
ENSTNIG00000003834	gfi1b	100	72.561	ENSOMEG00000015149	GFI1B	100	73.252	Oryzias_melastigma
ENSTNIG00000003834	gfi1b	100	57.941	ENSOGAG00000008879	GFI1B	100	57.941	Otolemur_garnettii
ENSTNIG00000003834	gfi1b	100	66.172	ENSPKIG00000007643	gfi1b	100	66.172	Paramormyrops_kingsleyae
ENSTNIG00000003834	gfi1b	100	58.213	ENSPSIG00000012112	GFI1B	100	58.213	Pelodiscus_sinensis
ENSTNIG00000003834	gfi1b	99	66.867	ENSPMGG00000006021	gfi1b	99	66.867	Periophthalmus_magnuspinnatus
ENSTNIG00000003834	gfi1b	100	53.022	ENSPCIG00000019724	GFI1B	100	53.022	Phascolarctos_cinereus
ENSTNIG00000003834	gfi1b	100	75.224	ENSPFOG00000003460	gfi1b	100	75.224	Poecilia_formosa
ENSTNIG00000003834	gfi1b	100	74.041	ENSPLAG00000017181	GFI1B	100	74.041	Poecilia_latipinna
ENSTNIG00000003834	gfi1b	100	76.292	ENSPLAG00000021960	GFI1B	100	76.292	Poecilia_latipinna
ENSTNIG00000003834	gfi1b	100	76.292	ENSPMEG00000001556	GFI1B	100	76.292	Poecilia_mexicana
ENSTNIG00000003834	gfi1b	100	76.292	ENSPMEG00000019220	gfi1b	100	76.292	Poecilia_mexicana
ENSTNIG00000003834	gfi1b	100	76.900	ENSPREG00000021718	gfi1b	100	76.900	Poecilia_reticulata
ENSTNIG00000003834	gfi1b	99	72.171	ENSPNYG00000018422	gfi1b	99	72.171	Pundamilia_nyererei
ENSTNIG00000003834	gfi1b	100	68.657	ENSPNAG00000021118	gfi1b	100	68.657	Pygocentrus_nattereri
ENSTNIG00000003834	gfi1b	100	47.838	ENSSHAG00000006462	GFI1B	100	47.838	Sarcophilus_harrisii
ENSTNIG00000003834	gfi1b	83	59.310	ENSSFOG00015011566	gfi1b	90	59.310	Scleropages_formosus
ENSTNIG00000003834	gfi1b	100	76.061	ENSSMAG00000015181	gfi1b	99	75.229	Scophthalmus_maximus
ENSTNIG00000003834	gfi1b	100	78.723	ENSSDUG00000011604	gfi1b	100	78.723	Seriola_dumerili
ENSTNIG00000003834	gfi1b	100	78.723	ENSSLDG00000013823	gfi1b	100	78.723	Seriola_lalandi_dorsalis
ENSTNIG00000003834	gfi1b	100	49.003	ENSSPUG00000016039	GFI1B	100	49.003	Sphenodon_punctatus
ENSTNIG00000003834	gfi1b	100	77.134	ENSSPAG00000022914	gfi1b	100	77.134	Stegastes_partitus
ENSTNIG00000003834	gfi1b	51	91.228	ENSTGUG00000005282	-	99	91.228	Taeniopygia_guttata
ENSTNIG00000003834	gfi1b	100	91.768	ENSTRUG00000004525	gfi1b	100	91.768	Takifugu_rubripes
ENSTNIG00000003834	gfi1b	100	41.888	ENSTBEG00000014459	GFI1B	100	41.888	Tupaia_belangeri
ENSTNIG00000003834	gfi1b	100	58.065	ENSXETG00000006263	gfi1b	100	58.480	Xenopus_tropicalis
ENSTNIG00000003834	gfi1b	100	76.364	ENSXMAG00000027589	gfi1b	100	76.364	Xiphophorus_maculatus