EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000003942 (Gene tree)
Gene ID: -
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3309 bases
Position: chrUn_random:64850815-64854123
Accession: ZDB-GENE-041212-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006550	PseudoU_synth_1	PF01416.20	7.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006701	-	1393	-	ENSTNIP00000006550	393 (aa)	-	H3CE76

Gene Model

Click here to download ENSTNIG00000003942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000003942	pus1	93	65.940	ENSG00000177192	PUS1	90	67.429	Homo_sapiens
ENSTNIG00000003942	pus1	100	72.750	ENSAPOG00000007254	pus1	93	72.000	Acanthochromis_polyacanthus
ENSTNIG00000003942	pus1	91	66.944	ENSAMEG00000013715	PUS1	87	66.667	Ailuropoda_melanoleuca
ENSTNIG00000003942	pus1	97	74.352	ENSACIG00000009169	pus1	91	73.834	Amphilophus_citrinellus
ENSTNIG00000003942	pus1	100	72.500	ENSAOCG00000022207	pus1	93	72.000	Amphiprion_ocellaris
ENSTNIG00000003942	pus1	100	72.500	ENSAPEG00000006039	pus1	100	72.000	Amphiprion_percula
ENSTNIG00000003942	pus1	100	73.434	ENSATEG00000020688	pus1	100	72.431	Anabas_testudineus
ENSTNIG00000003942	pus1	89	66.761	ENSACAG00000007367	PUS1	94	66.477	Anolis_carolinensis
ENSTNIG00000003942	pus1	82	68.308	ENSANAG00000036192	PUS1	99	68.000	Aotus_nancymaae
ENSTNIG00000003942	pus1	95	75.263	ENSACLG00000020868	pus1	97	74.474	Astatotilapia_calliptera
ENSTNIG00000003942	pus1	93	72.011	ENSAMXG00000008710	pus1	85	72.011	Astyanax_mexicanus
ENSTNIG00000003942	pus1	94	66.486	ENSBTAG00000012990	PUS1	91	66.486	Bos_taurus
ENSTNIG00000003942	pus1	83	40.413	WBGene00004248	pus-1	80	40.118	Caenorhabditis_elegans
ENSTNIG00000003942	pus1	65	67.059	ENSCJAG00000003720	PUS1	73	66.543	Callithrix_jacchus
ENSTNIG00000003942	pus1	93	67.027	ENSCAFG00000006429	PUS1	90	67.493	Canis_familiaris
ENSTNIG00000003942	pus1	91	67.769	ENSCAFG00020010737	PUS1	84	67.493	Canis_lupus_dingo
ENSTNIG00000003942	pus1	94	66.216	ENSCHIG00000000487	PUS1	91	66.216	Capra_hircus
ENSTNIG00000003942	pus1	89	69.602	ENSTSYG00000032605	PUS1	95	69.602	Carlito_syrichta
ENSTNIG00000003942	pus1	76	71.333	ENSCAPG00000006421	PUS1	99	67.485	Cavia_aperea
ENSTNIG00000003942	pus1	85	69.760	ENSCPOG00000001027	PUS1	84	66.301	Cavia_porcellus
ENSTNIG00000003942	pus1	93	65.583	ENSCCAG00000015879	PUS1	90	67.278	Cebus_capucinus
ENSTNIG00000003942	pus1	93	66.125	ENSCATG00000032870	PUS1	89	67.584	Cercocebus_atys
ENSTNIG00000003942	pus1	83	69.301	ENSCLAG00000011689	PUS1	84	66.389	Chinchilla_lanigera
ENSTNIG00000003942	pus1	93	66.396	ENSCSAG00000001879	PUS1	85	66.125	Chlorocebus_sabaeus
ENSTNIG00000003942	pus1	79	70.645	ENSCPBG00000024715	PUS1	91	68.731	Chrysemys_picta_bellii
ENSTNIG00000003942	pus1	84	44.578	ENSCING00000009426	-	88	44.277	Ciona_intestinalis
ENSTNIG00000003942	pus1	82	44.308	ENSCSAVG00000003751	-	67	44.308	Ciona_savignyi
ENSTNIG00000003942	pus1	89	59.943	ENSCANG00000035561	PUS1	89	61.212	Colobus_angolensis_palliatus
ENSTNIG00000003942	pus1	93	65.940	ENSCGRG00001019592	Pus1	86	65.668	Cricetulus_griseus_chok1gshd
ENSTNIG00000003942	pus1	93	65.940	ENSCGRG00000004048	Pus1	91	66.667	Cricetulus_griseus_crigri
ENSTNIG00000003942	pus1	97	71.649	ENSCSEG00000003629	pus1	90	70.619	Cynoglossus_semilaevis
ENSTNIG00000003942	pus1	95	76.800	ENSCVAG00000001265	pus1	90	76.267	Cyprinodon_variegatus
ENSTNIG00000003942	pus1	91	70.028	ENSDARG00000045562	pus1	96	72.694	Danio_rerio
ENSTNIG00000003942	pus1	91	67.036	ENSDNOG00000045576	PUS1	97	68.750	Dasypus_novemcinctus
ENSTNIG00000003942	pus1	82	67.385	ENSDORG00000011455	Pus1	99	67.077	Dipodomys_ordii
ENSTNIG00000003942	pus1	90	46.761	FBgn0038811	PUS1	84	46.761	Drosophila_melanogaster
ENSTNIG00000003942	pus1	87	69.883	ENSETEG00000019160	PUS1	85	68.376	Echinops_telfairi
ENSTNIG00000003942	pus1	87	45.879	ENSEBUG00000000368	-	67	45.879	Eptatretus_burgeri
ENSTNIG00000003942	pus1	94	64.785	ENSEASG00005016535	PUS1	85	64.516	Equus_asinus_asinus
ENSTNIG00000003942	pus1	94	64.690	ENSECAG00000006965	PUS1	92	64.420	Equus_caballus
ENSTNIG00000003942	pus1	98	70.992	ENSELUG00000010424	pus1	99	70.992	Esox_lucius
ENSTNIG00000003942	pus1	92	66.667	ENSFCAG00000010780	PUS1	84	66.391	Felis_catus
ENSTNIG00000003942	pus1	88	66.575	ENSFALG00000008273	PUS1	85	66.575	Ficedula_albicollis
ENSTNIG00000003942	pus1	92	67.680	ENSFDAG00000012518	PUS1	86	67.403	Fukomys_damarensis
ENSTNIG00000003942	pus1	98	74.425	ENSFHEG00000010504	pus1	91	76.000	Fundulus_heteroclitus
ENSTNIG00000003942	pus1	93	70.411	ENSGMOG00000008143	pus1	94	69.589	Gadus_morhua
ENSTNIG00000003942	pus1	84	71.903	ENSGALG00000002354	PUS1	80	71.299	Gallus_gallus
ENSTNIG00000003942	pus1	98	73.657	ENSGAFG00000006578	pus1	93	73.146	Gambusia_affinis
ENSTNIG00000003942	pus1	97	74.093	ENSGACG00000017566	pus1	96	73.316	Gasterosteus_aculeatus
ENSTNIG00000003942	pus1	79	69.677	ENSGAGG00000016730	-	92	67.802	Gopherus_agassizii
ENSTNIG00000003942	pus1	89	69.034	ENSGGOG00000009178	PUS1	87	68.807	Gorilla_gorilla
ENSTNIG00000003942	pus1	95	75.789	ENSHBUG00000001316	pus1	97	75.000	Haplochromis_burtoni
ENSTNIG00000003942	pus1	92	64.641	ENSHGLG00000016086	PUS1	91	64.365	Heterocephalus_glaber_female
ENSTNIG00000003942	pus1	92	64.365	ENSHGLG00100019362	PUS1	91	64.088	Heterocephalus_glaber_male
ENSTNIG00000003942	pus1	94	73.458	ENSHCOG00000014288	pus1	89	71.503	Hippocampus_comes
ENSTNIG00000003942	pus1	91	74.302	ENSIPUG00000010387	pus1	88	74.366	Ictalurus_punctatus
ENSTNIG00000003942	pus1	89	67.705	ENSSTOG00000011245	PUS1	85	65.489	Ictidomys_tridecemlineatus
ENSTNIG00000003942	pus1	90	65.819	ENSJJAG00000000088	Pus1	83	65.537	Jaculus_jaculus
ENSTNIG00000003942	pus1	95	71.883	ENSKMAG00000012702	pus1	88	71.353	Kryptolebias_marmoratus
ENSTNIG00000003942	pus1	93	75.538	ENSLBEG00000002845	pus1	91	75.000	Labrus_bergylta
ENSTNIG00000003942	pus1	82	59.077	ENSLACG00000016044	-	98	59.077	Latimeria_chalumnae
ENSTNIG00000003942	pus1	87	67.347	ENSLACG00000018598	PUS1	91	63.807	Latimeria_chalumnae
ENSTNIG00000003942	pus1	96	67.105	ENSLOCG00000006127	pus1	98	65.063	Lepisosteus_oculatus
ENSTNIG00000003942	pus1	92	66.759	ENSLAFG00000028731	PUS1	96	66.482	Loxodonta_africana
ENSTNIG00000003942	pus1	93	65.940	ENSMFAG00000041194	PUS1	89	67.890	Macaca_fascicularis
ENSTNIG00000003942	pus1	90	67.598	ENSMMUG00000031463	PUS1	91	67.227	Macaca_mulatta
ENSTNIG00000003942	pus1	93	66.396	ENSMNEG00000002814	PUS1	89	67.890	Macaca_nemestrina
ENSTNIG00000003942	pus1	83	68.196	ENSMLEG00000043560	PUS1	99	68.000	Mandrillus_leucophaeus
ENSTNIG00000003942	pus1	98	72.265	ENSMAMG00000007371	pus1	93	71.501	Mastacembelus_armatus
ENSTNIG00000003942	pus1	95	75.526	ENSMZEG00005017746	pus1	90	74.737	Maylandia_zebra
ENSTNIG00000003942	pus1	83	69.512	ENSMGAG00000001958	PUS1	99	68.902	Meleagris_gallopavo
ENSTNIG00000003942	pus1	90	67.797	ENSMAUG00000001482	Pus1	83	67.514	Mesocricetus_auratus
ENSTNIG00000003942	pus1	93	67.385	ENSMICG00000030980	PUS1	92	66.846	Microcebus_murinus
ENSTNIG00000003942	pus1	91	66.667	ENSMOCG00000022311	Pus1	85	66.389	Microtus_ochrogaster
ENSTNIG00000003942	pus1	97	79.688	ENSMMOG00000021022	pus1	97	79.167	Mola_mola
ENSTNIG00000003942	pus1	88	65.517	ENSMODG00000015551	PUS1	81	63.014	Monodelphis_domestica
ENSTNIG00000003942	pus1	99	72.727	ENSMALG00000013202	pus1	92	74.142	Monopterus_albus
ENSTNIG00000003942	pus1	92	67.680	MGP_CAROLIEiJ_G0027551	Pus1	91	67.403	Mus_caroli
ENSTNIG00000003942	pus1	92	67.680	ENSMUSG00000029507	Pus1	91	67.403	Mus_musculus
ENSTNIG00000003942	pus1	93	66.757	MGP_PahariEiJ_G0024133	Pus1	93	66.485	Mus_pahari
ENSTNIG00000003942	pus1	92	67.680	MGP_SPRETEiJ_G0028549	Pus1	91	67.403	Mus_spretus
ENSTNIG00000003942	pus1	87	69.883	ENSMPUG00000002314	PUS1	86	69.591	Mustela_putorius_furo
ENSTNIG00000003942	pus1	93	64.754	ENSMLUG00000015790	PUS1	99	64.481	Myotis_lucifugus
ENSTNIG00000003942	pus1	88	69.540	ENSNGAG00000012976	Pus1	82	69.253	Nannospalax_galili
ENSTNIG00000003942	pus1	97	74.870	ENSNBRG00000020502	pus1	99	74.346	Neolamprologus_brichardi
ENSTNIG00000003942	pus1	89	66.477	ENSNLEG00000008505	PUS1	99	68.038	Nomascus_leucogenys
ENSTNIG00000003942	pus1	87	60.933	ENSMEUG00000002825	PUS1	92	60.933	Notamacropus_eugenii
ENSTNIG00000003942	pus1	83	63.110	ENSOPRG00000002701	-	86	62.805	Ochotona_princeps
ENSTNIG00000003942	pus1	85	69.733	ENSODEG00000008248	PUS1	88	69.436	Octodon_degus
ENSTNIG00000003942	pus1	95	74.805	ENSONIG00000003803	pus1	96	74.026	Oreochromis_niloticus
ENSTNIG00000003942	pus1	84	68.769	ENSOANG00000010619	PUS1	76	68.468	Ornithorhynchus_anatinus
ENSTNIG00000003942	pus1	90	67.416	ENSOCUG00000007310	PUS1	77	67.135	Oryctolagus_cuniculus
ENSTNIG00000003942	pus1	94	76.533	ENSORLG00000010787	pus1	90	75.532	Oryzias_latipes
ENSTNIG00000003942	pus1	94	76.800	ENSORLG00020011483	pus1	90	76.064	Oryzias_latipes_hni
ENSTNIG00000003942	pus1	94	76.800	ENSORLG00015023012	pus1	96	76.267	Oryzias_latipes_hsok
ENSTNIG00000003942	pus1	87	82.799	ENSOMEG00000022655	pus1	80	82.216	Oryzias_melastigma
ENSTNIG00000003942	pus1	87	68.622	ENSOGAG00000008720	PUS1	95	66.301	Otolemur_garnettii
ENSTNIG00000003942	pus1	94	65.946	ENSOARG00000013316	PUS1	84	65.676	Ovis_aries
ENSTNIG00000003942	pus1	93	65.668	ENSPPAG00000040971	PUS1	87	67.890	Pan_paniscus
ENSTNIG00000003942	pus1	92	66.667	ENSPPRG00000015456	PUS1	91	66.391	Panthera_pardus
ENSTNIG00000003942	pus1	88	67.341	ENSPTIG00000004201	PUS1	91	66.856	Panthera_tigris_altaica
ENSTNIG00000003942	pus1	93	65.668	ENSPTRG00000005643	PUS1	87	67.890	Pan_troglodytes
ENSTNIG00000003942	pus1	93	66.125	ENSPANG00000000376	PUS1	89	67.584	Papio_anubis
ENSTNIG00000003942	pus1	87	68.314	ENSPKIG00000019369	pus1	82	64.960	Paramormyrops_kingsleyae
ENSTNIG00000003942	pus1	88	67.919	ENSPSIG00000016432	PUS1	84	65.217	Pelodiscus_sinensis
ENSTNIG00000003942	pus1	90	76.901	ENSPMGG00000004522	pus1	92	76.338	Periophthalmus_magnuspinnatus
ENSTNIG00000003942	pus1	93	65.940	ENSPEMG00000013448	Pus1	86	65.668	Peromyscus_maniculatus_bairdii
ENSTNIG00000003942	pus1	83	60.736	ENSPMAG00000004636	pus1	98	60.736	Petromyzon_marinus
ENSTNIG00000003942	pus1	66	65.134	ENSPCIG00000022609	-	66	62.057	Phascolarctos_cinereus
ENSTNIG00000003942	pus1	98	73.402	ENSPFOG00000019669	pus1	93	72.890	Poecilia_formosa
ENSTNIG00000003942	pus1	98	73.146	ENSPLAG00000007185	pus1	93	72.634	Poecilia_latipinna
ENSTNIG00000003942	pus1	98	73.146	ENSPLAG00000002692	-	93	72.634	Poecilia_latipinna
ENSTNIG00000003942	pus1	98	73.657	ENSPMEG00000006038	pus1	97	73.146	Poecilia_mexicana
ENSTNIG00000003942	pus1	98	73.657	ENSPMEG00000011115	PUS1	93	73.146	Poecilia_mexicana
ENSTNIG00000003942	pus1	100	72.544	ENSPREG00000007231	pus1	99	74.932	Poecilia_reticulata
ENSTNIG00000003942	pus1	93	65.854	ENSPPYG00000005132	PUS1	86	65.583	Pongo_abelii
ENSTNIG00000003942	pus1	67	65.530	ENSPCAG00000009110	-	64	65.152	Procavia_capensis
ENSTNIG00000003942	pus1	81	63.750	ENSPCOG00000015595	PUS1	90	59.946	Propithecus_coquereli
ENSTNIG00000003942	pus1	95	75.526	ENSPNYG00000013571	pus1	90	74.737	Pundamilia_nyererei
ENSTNIG00000003942	pus1	93	73.243	ENSPNAG00000003938	pus1	87	72.703	Pygocentrus_nattereri
ENSTNIG00000003942	pus1	92	67.127	ENSRNOG00000037500	Pus1	85	66.851	Rattus_norvegicus
ENSTNIG00000003942	pus1	89	68.466	ENSRBIG00000043177	PUS1	91	68.196	Rhinopithecus_bieti
ENSTNIG00000003942	pus1	89	68.466	ENSRROG00000039744	PUS1	89	67.657	Rhinopithecus_roxellana
ENSTNIG00000003942	pus1	83	45.455	YPL212C	-	60	45.455	Saccharomyces_cerevisiae
ENSTNIG00000003942	pus1	89	68.466	ENSSBOG00000023593	PUS1	93	67.901	Saimiri_boliviensis_boliviensis
ENSTNIG00000003942	pus1	93	65.027	ENSSHAG00000013193	PUS1	86	66.289	Sarcophilus_harrisii
ENSTNIG00000003942	pus1	90	71.389	ENSSFOG00015003463	pus1	84	69.129	Scleropages_formosus
ENSTNIG00000003942	pus1	88	79.480	ENSSMAG00000019075	pus1	88	75.000	Scophthalmus_maximus
ENSTNIG00000003942	pus1	98	74.809	ENSSDUG00000007102	pus1	93	74.046	Seriola_dumerili
ENSTNIG00000003942	pus1	98	74.809	ENSSLDG00000022850	pus1	93	74.046	Seriola_lalandi_dorsalis
ENSTNIG00000003942	pus1	77	61.184	ENSSARG00000008367	PUS1	98	61.184	Sorex_araneus
ENSTNIG00000003942	pus1	88	65.014	ENSSPUG00000010009	PUS1	90	64.738	Sphenodon_punctatus
ENSTNIG00000003942	pus1	100	71.000	ENSSPAG00000006272	pus1	100	70.500	Stegastes_partitus
ENSTNIG00000003942	pus1	92	66.851	ENSSSCG00000009741	PUS1	90	66.575	Sus_scrofa
ENSTNIG00000003942	pus1	84	71.515	ENSTGUG00000008068	PUS1	99	71.212	Taeniopygia_guttata
ENSTNIG00000003942	pus1	100	86.294	ENSTRUG00000002198	pus1	99	86.294	Takifugu_rubripes
ENSTNIG00000003942	pus1	95	66.133	ENSTTRG00000000632	PUS1	87	65.600	Tursiops_truncatus
ENSTNIG00000003942	pus1	91	66.944	ENSUAMG00000017197	PUS1	90	66.667	Ursus_americanus
ENSTNIG00000003942	pus1	93	65.668	ENSUMAG00000002831	PUS1	98	69.394	Ursus_maritimus
ENSTNIG00000003942	pus1	90	67.697	ENSVVUG00000004199	PUS1	81	67.416	Vulpes_vulpes
ENSTNIG00000003942	pus1	90	64.225	ENSXETG00000002030	pus1	88	63.944	Xenopus_tropicalis
ENSTNIG00000003942	pus1	81	49.383	ENSXETG00000033640	-	99	49.221	Xenopus_tropicalis
ENSTNIG00000003942	pus1	94	76.738	ENSXCOG00000004722	pus1	95	77.322	Xiphophorus_couchianus
ENSTNIG00000003942	pus1	98	73.913	ENSXMAG00000000988	pus1	93	73.402	Xiphophorus_maculatus