EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTNIG00000003975 (Gene tree)
Gene ID
-
Gene Symbol
YTHDF1 (1 of many)
Alias
C20orf21|FLJ20391
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Plus strand
Length
3382 bases
Position
chrUn_random:65082306-65085687
Accession
15867
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000006584YTHPF04146.152.8e-3511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000006735YTHDF1 (1 of many)-2011623-ENSTNIP00000006584540 (aa)-H3CEB0
Gene Model
Click here to download ENSTNIG00000003975's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000003975's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000003975YTHDF110060.531ENSTNIG00000012698ythdf39759.863
ENSTNIG00000003975YTHDF19974.695ENSTNIG00000012490ythdf19675.090
ENSTNIG00000003975YTHDF19760.304ENSTNIG00000017263ythdf29561.189
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000003975YTHDF110072.949ENSG00000149658YTHDF110072.203Homo_sapiens
ENSTNIG00000003975YTHDF19677.102ENSAPOG00000004358ythdf19676.923Acanthochromis_polyacanthus
ENSTNIG00000003975YTHDF110084.749ENSAPOG00000010796YTHDF110085.269Acanthochromis_polyacanthus
ENSTNIG00000003975YTHDF19971.403ENSAMEG00000017323YTHDF19873.369Ailuropoda_melanoleuca
ENSTNIG00000003975YTHDF110083.566ENSACIG00000020083YTHDF110085.866Amphilophus_citrinellus
ENSTNIG00000003975YTHDF19676.330ENSACIG00000011264ythdf19677.007Amphilophus_citrinellus
ENSTNIG00000003975YTHDF110085.536ENSAOCG00000012567YTHDF110086.071Amphiprion_ocellaris
ENSTNIG00000003975YTHDF19677.818ENSAOCG00000022251ythdf19777.677Amphiprion_ocellaris
ENSTNIG00000003975YTHDF110085.714ENSAPEG00000008750YTHDF110086.250Amphiprion_percula
ENSTNIG00000003975YTHDF19674.787ENSAPEG00000021878ythdf19574.746Amphiprion_percula
ENSTNIG00000003975YTHDF19676.770ENSATEG00000023840ythdf19776.079Anabas_testudineus
ENSTNIG00000003975YTHDF110084.413ENSATEG00000005996YTHDF110086.879Anabas_testudineus
ENSTNIG00000003975YTHDF19973.951ENSAPLG00000005985YTHDF19973.555Anas_platyrhynchos
ENSTNIG00000003975YTHDF110073.739ENSACAG00000005560YTHDF110074.256Anolis_carolinensis
ENSTNIG00000003975YTHDF110072.396ENSANAG00000034786-10072.028Aotus_nancymaae
ENSTNIG00000003975YTHDF110060.140ENSANAG00000021022-10060.420Aotus_nancymaae
ENSTNIG00000003975YTHDF110084.464ENSACLG00000025518YTHDF110085.000Astatotilapia_calliptera
ENSTNIG00000003975YTHDF110072.174ENSBTAG00000010383YTHDF110072.125Bos_taurus
ENSTNIG00000003975YTHDF110072.028ENSCJAG00000010056YTHDF110071.629Callithrix_jacchus
ENSTNIG00000003975YTHDF19172.937ENSCAFG00000012772YTHDF19972.710Canis_familiaris
ENSTNIG00000003975YTHDF19172.937ENSCAFG00020001214YTHDF19972.710Canis_lupus_dingo
ENSTNIG00000003975YTHDF110070.761ENSCHIG00000026494YTHDF110071.603Capra_hircus
ENSTNIG00000003975YTHDF19971.529ENSTSYG00000033436YTHDF19972.232Carlito_syrichta
ENSTNIG00000003975YTHDF19771.275ENSCAPG00000002544YTHDF19471.377Cavia_aperea
ENSTNIG00000003975YTHDF110072.552ENSCPOG00000010202YTHDF110073.077Cavia_porcellus
ENSTNIG00000003975YTHDF110071.951ENSCCAG00000024650YTHDF110071.553Cebus_capucinus
ENSTNIG00000003975YTHDF110072.522ENSCATG00000033272YTHDF110072.552Cercocebus_atys
ENSTNIG00000003975YTHDF110072.396ENSCLAG00000005989YTHDF110072.222Chinchilla_lanigera
ENSTNIG00000003975YTHDF110072.522ENSCSAG00000016266YTHDF110072.552Chlorocebus_sabaeus
ENSTNIG00000003975YTHDF110074.564ENSCPBG00000027183YTHDF110074.520Chrysemys_picta_bellii
ENSTNIG00000003975YTHDF19972.487ENSCANG00000029082YTHDF19872.518Colobus_angolensis_palliatus
ENSTNIG00000003975YTHDF110073.030ENSCGRG00001016568Ythdf110073.124Cricetulus_griseus_chok1gshd
ENSTNIG00000003975YTHDF19872.420ENSCGRG00000009207Ythdf110073.227Cricetulus_griseus_crigri
ENSTNIG00000003975YTHDF19674.234ENSCSEG00000020623YTHDF19775.856Cynoglossus_semilaevis
ENSTNIG00000003975YTHDF19786.885ENSCVAG00000014378YTHDF19988.095Cyprinodon_variegatus
ENSTNIG00000003975YTHDF19975.360ENSCVAG00000017940ythdf19675.735Cyprinodon_variegatus
ENSTNIG00000003975YTHDF15184.589ENSDARG00000016447ythdf19478.045Danio_rerio
ENSTNIG00000003975YTHDF110073.473ENSDNOG00000043590YTHDF110073.473Dasypus_novemcinctus
ENSTNIG00000003975YTHDF19769.604ENSDORG00000002879Ythdf19471.403Dipodomys_ordii
ENSTNIG00000003975YTHDF18154.598ENSETEG00000017860-9754.598Echinops_telfairi
ENSTNIG00000003975YTHDF110073.077ENSEASG00005023186YTHDF110072.145Equus_asinus_asinus
ENSTNIG00000003975YTHDF19873.002ENSECAG00000019475YTHDF110071.402Equus_caballus
ENSTNIG00000003975YTHDF19271.617ENSEEUG00000007461YTHDF110071.563Erinaceus_europaeus
ENSTNIG00000003975YTHDF19979.615ENSELUG00000001906YTHDF19978.771Esox_lucius
ENSTNIG00000003975YTHDF19975.879ENSELUG00000022768ythdf19976.167Esox_lucius
ENSTNIG00000003975YTHDF110073.205ENSFCAG00000008917YTHDF110073.647Felis_catus
ENSTNIG00000003975YTHDF110074.564ENSFALG00000010463YTHDF110074.171Ficedula_albicollis
ENSTNIG00000003975YTHDF110072.632ENSFDAG00000019602YTHDF110073.298Fukomys_damarensis
ENSTNIG00000003975YTHDF19785.946ENSFHEG00000002540YTHDF19987.796Fundulus_heteroclitus
ENSTNIG00000003975YTHDF19976.029ENSFHEG00000023218ythdf19776.545Fundulus_heteroclitus
ENSTNIG00000003975YTHDF19874.199ENSGMOG00000019610ythdf19474.227Gadus_morhua
ENSTNIG00000003975YTHDF110074.653ENSGALG00000005745YTHDF110074.261Gallus_gallus
ENSTNIG00000003975YTHDF110083.721ENSGAFG00000021100YTHDF19987.868Gambusia_affinis
ENSTNIG00000003975YTHDF19674.126ENSGACG00000012014ythdf19474.087Gasterosteus_aculeatus
ENSTNIG00000003975YTHDF110082.823ENSGACG00000002613YTHDF110084.184Gasterosteus_aculeatus
ENSTNIG00000003975YTHDF110075.261ENSGAGG00000003007YTHDF110074.869Gopherus_agassizii
ENSTNIG00000003975YTHDF110073.124ENSGGOG00000008340YTHDF110072.378Gorilla_gorilla
ENSTNIG00000003975YTHDF110085.000ENSHBUG00000004875YTHDF110085.536Haplochromis_burtoni
ENSTNIG00000003975YTHDF19674.740ENSHBUG00000011284ythdf19775.044Haplochromis_burtoni
ENSTNIG00000003975YTHDF110072.105ENSHGLG00000006585YTHDF110072.632Heterocephalus_glaber_female
ENSTNIG00000003975YTHDF110072.105ENSHGLG00100004683YTHDF110072.632Heterocephalus_glaber_male
ENSTNIG00000003975YTHDF110077.170ENSHCOG00000011303YTHDF110083.521Hippocampus_comes
ENSTNIG00000003975YTHDF19971.761ENSHCOG00000008866ythdf19772.432Hippocampus_comes
ENSTNIG00000003975YTHDF19778.261ENSIPUG00000000425Ythdf19878.442Ictalurus_punctatus
ENSTNIG00000003975YTHDF19972.872ENSSTOG00000023001YTHDF19972.695Ictidomys_tridecemlineatus
ENSTNIG00000003975YTHDF19873.145ENSJJAG00000013589Ythdf110073.759Jaculus_jaculus
ENSTNIG00000003975YTHDF19676.740ENSKMAG00000005595ythdf19776.740Kryptolebias_marmoratus
ENSTNIG00000003975YTHDF19785.145ENSKMAG00000017472YTHDF19986.789Kryptolebias_marmoratus
ENSTNIG00000003975YTHDF110083.362ENSLBEG00000012068YTHDF110084.575Labrus_bergylta
ENSTNIG00000003975YTHDF19676.867ENSLBEG00000014105ythdf19476.588Labrus_bergylta
ENSTNIG00000003975YTHDF19671.505ENSLACG00000014195YTHDF19572.407Latimeria_chalumnae
ENSTNIG00000003975YTHDF110073.737ENSLOCG00000005020ythdf19476.029Lepisosteus_oculatus
ENSTNIG00000003975YTHDF110072.902ENSLAFG00000008884YTHDF110072.378Loxodonta_africana
ENSTNIG00000003975YTHDF110072.522ENSMFAG00000042868YTHDF110072.552Macaca_fascicularis
ENSTNIG00000003975YTHDF110072.522ENSMMUG00000009227YTHDF110072.552Macaca_mulatta
ENSTNIG00000003975YTHDF110072.522ENSMNEG00000030851YTHDF110072.552Macaca_nemestrina
ENSTNIG00000003975YTHDF19872.615ENSMLEG00000009252YTHDF110072.647Mandrillus_leucophaeus
ENSTNIG00000003975YTHDF110084.886ENSMAMG00000011072YTHDF110086.679Mastacembelus_armatus
ENSTNIG00000003975YTHDF19675.769ENSMAMG00000024255ythdf19676.277Mastacembelus_armatus
ENSTNIG00000003975YTHDF19675.714ENSMZEG00005026397ythdf19776.064Maylandia_zebra
ENSTNIG00000003975YTHDF110085.000ENSMZEG00005023596YTHDF110085.536Maylandia_zebra
ENSTNIG00000003975YTHDF19973.868ENSMGAG00000006139YTHDF19973.473Meleagris_gallopavo
ENSTNIG00000003975YTHDF110073.030ENSMAUG00000017660Ythdf110072.727Mesocricetus_auratus
ENSTNIG00000003975YTHDF110071.826ENSMICG00000032266YTHDF110071.951Microcebus_murinus
ENSTNIG00000003975YTHDF110072.000ENSMOCG00000013573Ythdf110072.902Microtus_ochrogaster
ENSTNIG00000003975YTHDF19671.918ENSMMOG00000017500ythdf19572.308Mola_mola
ENSTNIG00000003975YTHDF19978.489ENSMMOG00000020467YTHDF19482.007Mola_mola
ENSTNIG00000003975YTHDF19172.762ENSMODG00000016842YTHDF110073.143Monodelphis_domestica
ENSTNIG00000003975YTHDF110084.413ENSMALG00000022209YTHDF110084.413Monopterus_albus
ENSTNIG00000003975YTHDF19675.045ENSMALG00000015672ythdf19575.943Monopterus_albus
ENSTNIG00000003975YTHDF110072.378MGP_CAROLIEiJ_G0024790Ythdf110072.727Mus_caroli
ENSTNIG00000003975YTHDF110072.378ENSMUSG00000038848Ythdf110072.727Mus_musculus
ENSTNIG00000003975YTHDF110072.378MGP_PahariEiJ_G0026237Ythdf110073.124Mus_pahari
ENSTNIG00000003975YTHDF110072.378MGP_SPRETEiJ_G0025715Ythdf110072.727Mus_spretus
ENSTNIG00000003975YTHDF19169.439ENSMPUG00000008111YTHDF110071.401Mustela_putorius_furo
ENSTNIG00000003975YTHDF19772.549ENSMLUG00000002241YTHDF19672.321Myotis_lucifugus
ENSTNIG00000003975YTHDF110073.217ENSNGAG00000000334Ythdf110073.776Nannospalax_galili
ENSTNIG00000003975YTHDF110085.000ENSNBRG00000015321YTHDF110085.536Neolamprologus_brichardi
ENSTNIG00000003975YTHDF19975.265ENSNBRG00000008213ythdf19676.965Neolamprologus_brichardi
ENSTNIG00000003975YTHDF19567.970ENSOPRG00000001758-9867.420Ochotona_princeps
ENSTNIG00000003975YTHDF19659.459ENSODEG00000000074-9559.855Octodon_degus
ENSTNIG00000003975YTHDF110071.354ENSODEG00000004380-10072.600Octodon_degus
ENSTNIG00000003975YTHDF19674.177ENSONIG00000016799ythdf19774.486Oreochromis_niloticus
ENSTNIG00000003975YTHDF110074.394ENSOANG00000003723YTHDF110074.435Ornithorhynchus_anatinus
ENSTNIG00000003975YTHDF19781.317ENSORLG00000009739YTHDF19983.662Oryzias_latipes
ENSTNIG00000003975YTHDF19672.837ENSORLG00000014665YTHDF19573.494Oryzias_latipes
ENSTNIG00000003975YTHDF19780.817ENSORLG00020001332YTHDF19983.303Oryzias_latipes_hni
ENSTNIG00000003975YTHDF19673.310ENSORLG00020000307ythdf19573.966Oryzias_latipes_hni
ENSTNIG00000003975YTHDF110078.808ENSORLG00015018321YTHDF19983.303Oryzias_latipes_hsok
ENSTNIG00000003975YTHDF19673.137ENSORLG00015006302ythdf19573.793Oryzias_latipes_hsok
ENSTNIG00000003975YTHDF110078.956ENSOMEG00000011843YTHDF19482.149Oryzias_melastigma
ENSTNIG00000003975YTHDF19674.597ENSOMEG00000002941YTHDF19775.224Oryzias_melastigma
ENSTNIG00000003975YTHDF110071.478ENSOGAG00000000480YTHDF110072.348Otolemur_garnettii
ENSTNIG00000003975YTHDF19970.856ENSOARG00000011639YTHDF19870.916Ovis_aries
ENSTNIG00000003975YTHDF19973.274ENSPPAG00000023277YTHDF110072.518Pan_paniscus
ENSTNIG00000003975YTHDF110073.601ENSPPRG00000020805YTHDF110073.868Panthera_pardus
ENSTNIG00000003975YTHDF19973.134ENSPTIG00000017355YTHDF19972.677Panthera_tigris_altaica
ENSTNIG00000003975YTHDF110073.124ENSPTRG00000013730YTHDF110072.378Pan_troglodytes
ENSTNIG00000003975YTHDF110072.522ENSPANG00000021472YTHDF110072.552Papio_anubis
ENSTNIG00000003975YTHDF19974.690ENSPKIG00000005026YTHDF19674.864Paramormyrops_kingsleyae
ENSTNIG00000003975YTHDF110071.252ENSPKIG00000005427ythdf110073.333Paramormyrops_kingsleyae
ENSTNIG00000003975YTHDF19973.462ENSPSIG00000005529YTHDF19573.675Pelodiscus_sinensis
ENSTNIG00000003975YTHDF19782.646ENSPMGG00000009101YTHDF19982.990Periophthalmus_magnuspinnatus
ENSTNIG00000003975YTHDF19374.188ENSPMGG00000015328ythdf19575.315Periophthalmus_magnuspinnatus
ENSTNIG00000003975YTHDF19872.598ENSPEMG00000020199Ythdf110073.132Peromyscus_maniculatus_bairdii
ENSTNIG00000003975YTHDF19973.860ENSPCIG00000017170YTHDF110073.946Phascolarctos_cinereus
ENSTNIG00000003975YTHDF19974.873ENSPFOG00000005405ythdf19575.436Poecilia_formosa
ENSTNIG00000003975YTHDF19977.580ENSPLAG00000006653ythdf19777.818Poecilia_latipinna
ENSTNIG00000003975YTHDF110081.199ENSPLAG00000006298YTHDF19483.849Poecilia_latipinna
ENSTNIG00000003975YTHDF19976.377ENSPMEG00000023753ythdf19776.993Poecilia_mexicana
ENSTNIG00000003975YTHDF110085.432ENSPMEG00000020969-10086.559Poecilia_mexicana
ENSTNIG00000003975YTHDF19977.046ENSPREG00000002173ythdf19777.273Poecilia_reticulata
ENSTNIG00000003975YTHDF19781.135ENSPREG00000017662YTHDF19283.865Poecilia_reticulata
ENSTNIG00000003975YTHDF19870.896ENSPPYG00000011226YTHDF110070.896Pongo_abelii
ENSTNIG00000003975YTHDF18869.141ENSPCAG00000002452YTHDF19869.685Procavia_capensis
ENSTNIG00000003975YTHDF110072.348ENSPCOG00000025969YTHDF110072.474Propithecus_coquereli
ENSTNIG00000003975YTHDF19867.325ENSPVAG00000017568YTHDF19767.942Pteropus_vampyrus
ENSTNIG00000003975YTHDF110085.000ENSPNYG00000002266YTHDF110085.536Pundamilia_nyererei
ENSTNIG00000003975YTHDF19675.714ENSPNYG00000014007ythdf19776.064Pundamilia_nyererei
ENSTNIG00000003975YTHDF15182.877ENSPNAG00000012447ythdf110078.634Pygocentrus_nattereri
ENSTNIG00000003975YTHDF110072.552ENSRNOG00000027015Ythdf110073.252Rattus_norvegicus
ENSTNIG00000003975YTHDF110071.404ENSRBIG00000044959YTHDF110071.853Rhinopithecus_bieti
ENSTNIG00000003975YTHDF110071.404ENSRROG00000033014YTHDF110071.853Rhinopithecus_roxellana
ENSTNIG00000003975YTHDF19770.893ENSSBOG00000027278YTHDF110070.058Saimiri_boliviensis_boliviensis
ENSTNIG00000003975YTHDF19972.949ENSSHAG00000010430YTHDF18973.768Sarcophilus_harrisii
ENSTNIG00000003975YTHDF19975.916ENSSFOG00015000284ythdf110074.329Scleropages_formosus
ENSTNIG00000003975YTHDF19171.053ENSSMAG00000013715ythdf19372.669Scophthalmus_maximus
ENSTNIG00000003975YTHDF19989.577ENSSMAG00000007635YTHDF19384.946Scophthalmus_maximus
ENSTNIG00000003975YTHDF19987.013ENSSDUG00000015823YTHDF19986.751Seriola_dumerili
ENSTNIG00000003975YTHDF19676.923ENSSDUG00000000435ythdf19676.744Seriola_dumerili
ENSTNIG00000003975YTHDF110080.935ENSSLDG00000001054YTHDF110081.835Seriola_lalandi_dorsalis
ENSTNIG00000003975YTHDF19674.194ENSSLDG00000024948ythdf19574.490Seriola_lalandi_dorsalis
ENSTNIG00000003975YTHDF19173.333ENSSPUG00000015143YTHDF110073.855Sphenodon_punctatus
ENSTNIG00000003975YTHDF19673.773ENSSPAG00000014989ythdf19573.737Stegastes_partitus
ENSTNIG00000003975YTHDF110085.310ENSSPAG00000003666YTHDF110085.841Stegastes_partitus
ENSTNIG00000003975YTHDF110071.053ENSSSCG00000040086YTHDF110072.105Sus_scrofa
ENSTNIG00000003975YTHDF19973.944ENSTGUG00000007565YTHDF110074.250Taeniopygia_guttata
ENSTNIG00000003975YTHDF19974.454ENSTRUG00000004288ythdf19775.172Takifugu_rubripes
ENSTNIG00000003975YTHDF19686.130ENSTRUG00000005049YTHDF19786.301Takifugu_rubripes
ENSTNIG00000003975YTHDF19969.204ENSTTRG00000001804YTHDF19770.018Tursiops_truncatus
ENSTNIG00000003975YTHDF19772.072ENSUAMG00000011021YTHDF110072.710Ursus_americanus
ENSTNIG00000003975YTHDF19171.073ENSUMAG00000022290YTHDF110072.275Ursus_maritimus
ENSTNIG00000003975YTHDF19172.605ENSVVUG00000015275YTHDF19972.901Vulpes_vulpes
ENSTNIG00000003975YTHDF19773.111ENSXETG00000027086ythdf19572.563Xenopus_tropicalis
ENSTNIG00000003975YTHDF19577.431ENSXCOG00000002490ythdf19277.674Xiphophorus_couchianus
ENSTNIG00000003975YTHDF19780.763ENSXCOG00000008115YTHDF19482.746Xiphophorus_couchianus
ENSTNIG00000003975YTHDF110081.848ENSXMAG00000015644YTHDF19987.890Xiphophorus_maculatus
ENSTNIG00000003975YTHDF19974.780ENSXMAG00000008525ythdf19477.528Xiphophorus_maculatus

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