EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000004026 (Gene tree)
Gene ID: -
Gene Symbol: rrs1
Alias: fj66c04|wu:fj66c04|zgc:66358
Full Name: RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1020 bases
Position: chr6:3385880-3386899
Accession: ZDB-GENE-030131-9345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006636	RRS1	PF04939.12	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006787	-	1020	-	ENSTNIP00000006636	339 (aa)	-	H3CEG2

Gene Model

Click here to download ENSTNIG00000004026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004026	rrs1	93	66.984	ENSG00000179041	RRS1	76	67.029	Homo_sapiens
ENSTNIG00000004026	rrs1	93	82.222	ENSATEG00000011743	rrs1	85	82.886	Anabas_testudineus
ENSTNIG00000004026	rrs1	99	65.282	ENSANAG00000018116	RRS1	76	67.754	Aotus_nancymaae
ENSTNIG00000004026	rrs1	93	72.414	ENSAMXG00000037893	rrs1	83	72.414	Astyanax_mexicanus
ENSTNIG00000004026	rrs1	97	64.955	ENSBTAG00000016716	RRS1	76	66.304	Bos_taurus
ENSTNIG00000004026	rrs1	77	45.926	WBGene00007617	rrbs-1	79	45.725	Caenorhabditis_elegans
ENSTNIG00000004026	rrs1	99	64.985	ENSCJAG00000022034	RRS1	76	67.029	Callithrix_jacchus
ENSTNIG00000004026	rrs1	98	60.000	ENSCAFG00000007313	RRS1	76	65.942	Canis_familiaris
ENSTNIG00000004026	rrs1	98	60.000	ENSCAFG00020016049	-	76	65.942	Canis_lupus_dingo
ENSTNIG00000004026	rrs1	98	60.000	ENSCAFG00020020365	-	76	65.942	Canis_lupus_dingo
ENSTNIG00000004026	rrs1	98	60.548	ENSCHIG00000009141	RRS1	76	66.304	Capra_hircus
ENSTNIG00000004026	rrs1	99	63.501	ENSCPOG00000000647	RRS1	77	67.391	Cavia_porcellus
ENSTNIG00000004026	rrs1	97	66.163	ENSCCAG00000032186	RRS1	76	67.391	Cebus_capucinus
ENSTNIG00000004026	rrs1	93	67.302	ENSCATG00000016944	RRS1	76	67.391	Cercocebus_atys
ENSTNIG00000004026	rrs1	99	62.050	ENSCSAG00000018552	RRS1	76	67.029	Chlorocebus_sabaeus
ENSTNIG00000004026	rrs1	93	66.984	ENSCHOG00000002455	RRS1	76	67.029	Choloepus_hoffmanni
ENSTNIG00000004026	rrs1	93	58.567	ENSCPBG00000021374	RRS1	86	59.603	Chrysemys_picta_bellii
ENSTNIG00000004026	rrs1	96	52.439	ENSCING00000002177	-	84	54.945	Ciona_intestinalis
ENSTNIG00000004026	rrs1	93	52.050	ENSCSAVG00000011819	-	84	54.212	Ciona_savignyi
ENSTNIG00000004026	rrs1	99	64.985	ENSCANG00000012718	RRS1	76	67.391	Colobus_angolensis_palliatus
ENSTNIG00000004026	rrs1	99	65.089	ENSCGRG00001015575	-	79	67.273	Cricetulus_griseus_chok1gshd
ENSTNIG00000004026	rrs1	99	65.103	ENSCGRG00001002391	-	76	67.029	Cricetulus_griseus_chok1gshd
ENSTNIG00000004026	rrs1	89	66.887	ENSCSEG00000014750	rrs1	81	66.443	Cynoglossus_semilaevis
ENSTNIG00000004026	rrs1	90	69.079	ENSCVAG00000017878	rrs1	84	68.792	Cyprinodon_variegatus
ENSTNIG00000004026	rrs1	88	78.930	ENSDARG00000003941	rrs1	86	79.125	Danio_rerio
ENSTNIG00000004026	rrs1	93	66.139	ENSDNOG00000017900	RRS1	75	66.304	Dasypus_novemcinctus
ENSTNIG00000004026	rrs1	64	68.493	ENSDORG00000026331	Rrs1	71	68.617	Dipodomys_ordii
ENSTNIG00000004026	rrs1	99	47.214	FBgn0052409	CG32409	79	50.903	Drosophila_melanogaster
ENSTNIG00000004026	rrs1	90	56.579	ENSEBUG00000013506	rrs1	89	58.491	Eptatretus_burgeri
ENSTNIG00000004026	rrs1	98	61.096	ENSEASG00005001691	RRS1	76	67.029	Equus_asinus_asinus
ENSTNIG00000004026	rrs1	98	65.476	ENSECAG00000004492	RRS1	82	67.029	Equus_caballus
ENSTNIG00000004026	rrs1	93	65.714	ENSEEUG00000013719	RRS1	75	65.818	Erinaceus_europaeus
ENSTNIG00000004026	rrs1	98	60.274	ENSFCAG00000014332	RRS1	75	66.545	Felis_catus
ENSTNIG00000004026	rrs1	86	57.475	ENSGALG00000030890	RRS1	85	57.843	Gallus_gallus
ENSTNIG00000004026	rrs1	89	77.741	ENSGACG00000002969	rrs1	84	77.852	Gasterosteus_aculeatus
ENSTNIG00000004026	rrs1	92	58.696	ENSGAGG00000023718	RRS1	84	59.934	Gopherus_agassizii
ENSTNIG00000004026	rrs1	93	67.619	ENSGGOG00000026663	RRS1	76	67.754	Gorilla_gorilla
ENSTNIG00000004026	rrs1	99	64.392	ENSHGLG00000021423	RRS1	76	66.667	Heterocephalus_glaber_female
ENSTNIG00000004026	rrs1	99	64.392	ENSHGLG00100020640	RRS1	76	66.667	Heterocephalus_glaber_male
ENSTNIG00000004026	rrs1	99	71.469	ENSHCOG00000015358	rrs1	83	75.758	Hippocampus_comes
ENSTNIG00000004026	rrs1	88	74.074	ENSIPUG00000014412	rrs1	85	74.074	Ictalurus_punctatus
ENSTNIG00000004026	rrs1	99	63.764	ENSSTOG00000026310	RRS1	76	67.754	Ictidomys_tridecemlineatus
ENSTNIG00000004026	rrs1	82	59.498	ENSJJAG00000020395	-	74	60.156	Jaculus_jaculus
ENSTNIG00000004026	rrs1	90	66.667	ENSJJAG00000011507	-	75	67.636	Jaculus_jaculus
ENSTNIG00000004026	rrs1	89	82.119	ENSKMAG00000008238	rrs1	88	81.879	Kryptolebias_marmoratus
ENSTNIG00000004026	rrs1	91	73.786	ENSLACG00000004058	RRS1	90	74.747	Latimeria_chalumnae
ENSTNIG00000004026	rrs1	92	76.923	ENSLOCG00000017812	rrs1	87	77.778	Lepisosteus_oculatus
ENSTNIG00000004026	rrs1	93	66.349	ENSLAFG00000015405	RRS1	75	66.667	Loxodonta_africana
ENSTNIG00000004026	rrs1	99	65.000	ENSMFAG00000042747	RRS1	76	67.391	Macaca_fascicularis
ENSTNIG00000004026	rrs1	99	65.000	ENSMMUG00000000886	RRS1	76	67.391	Macaca_mulatta
ENSTNIG00000004026	rrs1	99	65.000	ENSMNEG00000011696	RRS1	76	67.391	Macaca_nemestrina
ENSTNIG00000004026	rrs1	93	67.302	ENSMLEG00000004794	RRS1	76	67.391	Mandrillus_leucophaeus
ENSTNIG00000004026	rrs1	88	81.208	ENSMZEG00005004349	RRS1	84	81.208	Maylandia_zebra
ENSTNIG00000004026	rrs1	99	67.456	ENSMAUG00000005392	Rrs1	76	68.478	Mesocricetus_auratus
ENSTNIG00000004026	rrs1	100	65.598	ENSMOCG00000015862	Rrs1	72	67.754	Microtus_ochrogaster
ENSTNIG00000004026	rrs1	99	62.426	ENSMODG00000024952	RRS1	82	66.000	Monodelphis_domestica
ENSTNIG00000004026	rrs1	99	65.396	MGP_CAROLIEiJ_G0013936	Rrs1	76	67.754	Mus_caroli
ENSTNIG00000004026	rrs1	99	65.689	ENSMUSG00000061024	Rrs1	76	67.754	Mus_musculus
ENSTNIG00000004026	rrs1	99	64.095	MGP_PahariEiJ_G0023883	Rrs1	76	66.667	Mus_pahari
ENSTNIG00000004026	rrs1	99	65.689	MGP_SPRETEiJ_G0014739	Rrs1	76	67.754	Mus_spretus
ENSTNIG00000004026	rrs1	99	64.688	ENSMPUG00000018626	RRS1	74	66.667	Mustela_putorius_furo
ENSTNIG00000004026	rrs1	97	64.048	ENSNGAG00000012904	Rrs1	76	65.942	Nannospalax_galili
ENSTNIG00000004026	rrs1	78	62.414	ENSNLEG00000027730	RRS1	75	67.982	Nomascus_leucogenys
ENSTNIG00000004026	rrs1	99	78.507	ENSONIG00000014187	rrs1	87	81.544	Oreochromis_niloticus
ENSTNIG00000004026	rrs1	95	62.577	ENSOANG00000012348	RRS1	74	63.538	Ornithorhynchus_anatinus
ENSTNIG00000004026	rrs1	96	65.337	ENSOCUG00000013490	RRS1	75	68.116	Oryctolagus_cuniculus
ENSTNIG00000004026	rrs1	93	69.304	ENSOMEG00000008525	rrs1	85	70.134	Oryzias_melastigma
ENSTNIG00000004026	rrs1	95	65.337	ENSOGAG00000001085	RRS1	76	65.942	Otolemur_garnettii
ENSTNIG00000004026	rrs1	98	56.712	ENSOARG00000017417	RRS1	73	61.232	Ovis_aries
ENSTNIG00000004026	rrs1	93	67.302	ENSPPAG00000024378	RRS1	76	67.391	Pan_paniscus
ENSTNIG00000004026	rrs1	98	60.274	ENSPPRG00000021408	RRS1	75	66.545	Panthera_pardus
ENSTNIG00000004026	rrs1	93	66.984	ENSPTRG00000030988	RRS1	76	67.029	Pan_troglodytes
ENSTNIG00000004026	rrs1	99	49.412	ENSPANG00000035974	RRS1	70	47.826	Papio_anubis
ENSTNIG00000004026	rrs1	88	72.148	ENSPKIG00000007953	rrs1	80	73.091	Paramormyrops_kingsleyae
ENSTNIG00000004026	rrs1	99	64.985	ENSPEMG00000014427	Rrs1	76	67.029	Peromyscus_maniculatus_bairdii
ENSTNIG00000004026	rrs1	88	62.290	ENSPMAG00000006513	rrs1	72	63.139	Petromyzon_marinus
ENSTNIG00000004026	rrs1	90	65.359	ENSPCIG00000026695	RRS1	77	65.704	Phascolarctos_cinereus
ENSTNIG00000004026	rrs1	96	81.481	ENSPFOG00000020722	rrs1	92	82.550	Poecilia_formosa
ENSTNIG00000004026	rrs1	89	70.530	ENSPREG00000019960	rrs1	94	68.468	Poecilia_reticulata
ENSTNIG00000004026	rrs1	87	67.677	ENSPPYG00000018637	RRS1	92	67.766	Pongo_abelii
ENSTNIG00000004026	rrs1	99	64.688	ENSPCAG00000009115	RRS1	76	66.667	Procavia_capensis
ENSTNIG00000004026	rrs1	86	76.976	ENSPNAG00000021707	rrs1	85	76.846	Pygocentrus_nattereri
ENSTNIG00000004026	rrs1	99	64.307	ENSRNOG00000007240	Rrs1	76	67.754	Rattus_norvegicus
ENSTNIG00000004026	rrs1	93	66.984	ENSRBIG00000009132	RRS1	76	67.029	Rhinopithecus_bieti
ENSTNIG00000004026	rrs1	93	66.984	ENSRROG00000013472	RRS1	76	67.029	Rhinopithecus_roxellana
ENSTNIG00000004026	rrs1	51	36.598	YOR294W	-	95	36.598	Saccharomyces_cerevisiae
ENSTNIG00000004026	rrs1	90	66.557	ENSSBOG00000011006	-	78	66.667	Saimiri_boliviensis_boliviensis
ENSTNIG00000004026	rrs1	89	66.776	ENSSBOG00000012639	-	78	66.667	Saimiri_boliviensis_boliviensis
ENSTNIG00000004026	rrs1	91	57.605	ENSSFOG00015015772	rrs1	82	55.593	Scleropages_formosus
ENSTNIG00000004026	rrs1	98	69.529	ENSSMAG00000015226	rrs1	76	79.710	Scophthalmus_maximus
ENSTNIG00000004026	rrs1	92	49.211	ENSSARG00000006976	RRS1	57	65.179	Sorex_araneus
ENSTNIG00000004026	rrs1	98	61.370	ENSSSCG00000006214	RRS1	76	66.667	Sus_scrofa
ENSTNIG00000004026	rrs1	94	86.207	ENSTRUG00000008796	rrs1	84	89.493	Takifugu_rubripes
ENSTNIG00000004026	rrs1	98	61.096	ENSTBEG00000014752	RRS1	76	67.391	Tupaia_belangeri
ENSTNIG00000004026	rrs1	99	64.535	ENSUAMG00000008502	RRS1	76	66.667	Ursus_americanus
ENSTNIG00000004026	rrs1	98	60.000	ENSVVUG00000018452	RRS1	76	65.942	Vulpes_vulpes
ENSTNIG00000004026	rrs1	88	81.879	ENSXCOG00000009809	rrs1	84	81.879	Xiphophorus_couchianus