EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000004148 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 5755 bases
Position: chrUn_random:66965850-66971604
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006769	zf-C2H2	PF00096.26	3.8e-46	1	7
ENSTNIP00000006769	zf-C2H2	PF00096.26	3.8e-46	2	7
ENSTNIP00000006769	zf-C2H2	PF00096.26	3.8e-46	3	7
ENSTNIP00000006769	zf-C2H2	PF00096.26	3.8e-46	4	7
ENSTNIP00000006769	zf-C2H2	PF00096.26	3.8e-46	5	7
ENSTNIP00000006769	zf-C2H2	PF00096.26	3.8e-46	6	7
ENSTNIP00000006769	zf-C2H2	PF00096.26	3.8e-46	7	7
ENSTNIP00000006769	zf-met	PF12874.7	7.8e-23	1	3
ENSTNIP00000006769	zf-met	PF12874.7	7.8e-23	2	3
ENSTNIP00000006769	zf-met	PF12874.7	7.8e-23	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006920	-	3276	-	ENSTNIP00000006769	1091 (aa)	-	H3CEU5

Gene Model

Click here to download ENSTNIG00000004148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000004148	-	50	33.469	ENSTNIG00000008200	-	100	33.469
ENSTNIG00000004148	-	52	31.718	ENSTNIG00000005479	-	99	32.927
ENSTNIG00000004148	-	61	35.537	ENSTNIG00000008194	prdm14	90	35.537
ENSTNIG00000004148	-	58	35.398	ENSTNIG00000018984	-	99	30.182
ENSTNIG00000004148	-	54	30.846	ENSTNIG00000000320	-	99	35.484
ENSTNIG00000004148	-	70	32.609	ENSTNIG00000001921	-	99	36.364
ENSTNIG00000004148	-	50	30.857	ENSTNIG00000002343	-	81	30.857
ENSTNIG00000004148	-	54	30.645	ENSTNIG00000000528	-	99	30.939
ENSTNIG00000004148	-	100	94.213	ENSTNIG00000008583	PRDM15	100	94.213

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004148	-	93	74.833	ENSAPOG00000001891	PRDM15	96	72.635	Acanthochromis_polyacanthus
ENSTNIG00000004148	-	97	58.455	ENSAMEG00000002162	PRDM15	82	68.182	Ailuropoda_melanoleuca
ENSTNIG00000004148	-	98	70.674	ENSACIG00000004096	PRDM15	98	70.219	Amphilophus_citrinellus
ENSTNIG00000004148	-	99	75.856	ENSAOCG00000015241	PRDM15	99	75.357	Amphiprion_ocellaris
ENSTNIG00000004148	-	99	75.766	ENSAPEG00000016305	PRDM15	98	74.632	Amphiprion_percula
ENSTNIG00000004148	-	99	75.383	ENSATEG00000003481	PRDM15	99	74.821	Anabas_testudineus
ENSTNIG00000004148	-	96	58.933	ENSAPLG00000001239	PRDM15	85	70.930	Anas_platyrhynchos
ENSTNIG00000004148	-	88	85.256	ENSACLG00000026541	PRDM15	91	83.140	Astatotilapia_calliptera
ENSTNIG00000004148	-	98	66.389	ENSAMXG00000008771	PRDM15	97	65.489	Astyanax_mexicanus
ENSTNIG00000004148	-	97	60.214	ENSBTAG00000021253	PRDM15	86	69.186	Bos_taurus
ENSTNIG00000004148	-	86	66.362	ENSCJAG00000013815	PRDM15	87	65.263	Callithrix_jacchus
ENSTNIG00000004148	-	96	70.000	ENSCAFG00000010223	PRDM15	89	64.604	Canis_familiaris
ENSTNIG00000004148	-	97	57.648	ENSCHIG00000016222	PRDM15	84	69.186	Capra_hircus
ENSTNIG00000004148	-	96	59.447	ENSTSYG00000011542	PRDM15	84	69.186	Carlito_syrichta
ENSTNIG00000004148	-	96	59.394	ENSCCAG00000030489	PRDM15	100	62.130	Cebus_capucinus
ENSTNIG00000004148	-	96	59.375	ENSCPBG00000012917	PRDM15	87	64.198	Chrysemys_picta_bellii
ENSTNIG00000004148	-	84	81.818	ENSCSEG00000013102	PRDM15	85	78.613	Cynoglossus_semilaevis
ENSTNIG00000004148	-	52	46.819	ENSCVAG00000019089	-	87	61.772	Cyprinodon_variegatus
ENSTNIG00000004148	-	75	67.597	ENSDARG00000098867	PRDM15	95	78.571	Danio_rerio
ENSTNIG00000004148	-	61	55.814	ENSEBUG00000014968	PRDM15	57	55.814	Eptatretus_burgeri
ENSTNIG00000004148	-	96	59.355	ENSEASG00005003891	PRDM15	85	69.186	Equus_asinus_asinus
ENSTNIG00000004148	-	96	59.339	ENSECAG00000017225	PRDM15	83	69.186	Equus_caballus
ENSTNIG00000004148	-	91	80.000	ENSELUG00000023702	PRDM15	89	77.778	Esox_lucius
ENSTNIG00000004148	-	85	59.562	ENSFCAG00000012695	PRDM15	76	70.930	Felis_catus
ENSTNIG00000004148	-	85	68.605	ENSFALG00000002064	PRDM15	81	68.605	Ficedula_albicollis
ENSTNIG00000004148	-	87	86.145	ENSFHEG00000015074	PRDM15	91	83.978	Fundulus_heteroclitus
ENSTNIG00000004148	-	80	80.588	ENSGMOG00000012203	PRDM15	80	78.889	Gadus_morhua
ENSTNIG00000004148	-	96	58.246	ENSGALG00000019178	PRDM15	100	55.787	Gallus_gallus
ENSTNIG00000004148	-	99	70.152	ENSGAFG00000015673	PRDM15	99	71.377	Gambusia_affinis
ENSTNIG00000004148	-	100	68.487	ENSGACG00000020205	PRDM15	100	65.593	Gasterosteus_aculeatus
ENSTNIG00000004148	-	97	59.196	ENSGAGG00000022082	PRDM15	85	69.767	Gopherus_agassizii
ENSTNIG00000004148	-	88	84.615	ENSHBUG00000018577	PRDM15	98	73.853	Haplochromis_burtoni
ENSTNIG00000004148	-	98	72.097	ENSHCOG00000000365	PRDM15	100	70.703	Hippocampus_comes
ENSTNIG00000004148	-	54	57.538	ENSIPUG00000018510	-	71	78.641	Ictalurus_punctatus
ENSTNIG00000004148	-	74	79.661	ENSKMAG00000010411	PRDM15	100	73.971	Kryptolebias_marmoratus
ENSTNIG00000004148	-	87	82.530	ENSLBEG00000013197	PRDM15	95	81.111	Labrus_bergylta
ENSTNIG00000004148	-	96	51.926	ENSLACG00000016206	PRDM15	85	59.515	Latimeria_chalumnae
ENSTNIG00000004148	-	94	64.593	ENSLOCG00000004600	PRDM15	73	70.723	Lepisosteus_oculatus
ENSTNIG00000004148	-	96	60.231	ENSLAFG00000008866	PRDM15	84	70.930	Loxodonta_africana
ENSTNIG00000004148	-	87	81.132	ENSMAMG00000004457	PRDM15	93	78.947	Mastacembelus_armatus
ENSTNIG00000004148	-	88	85.256	ENSMZEG00005022947	PRDM15	91	83.140	Maylandia_zebra
ENSTNIG00000004148	-	96	57.952	ENSMGAG00000014568	PRDM15	99	55.830	Meleagris_gallopavo
ENSTNIG00000004148	-	96	59.144	ENSMICG00000013783	PRDM15	85	69.186	Microcebus_murinus
ENSTNIG00000004148	-	88	82.609	ENSMMOG00000005844	PRDM15	97	80.117	Mola_mola
ENSTNIG00000004148	-	97	59.389	ENSMODG00000020959	PRDM15	87	69.767	Monodelphis_domestica
ENSTNIG00000004148	-	99	74.185	ENSMALG00000002361	PRDM15	96	73.694	Monopterus_albus
ENSTNIG00000004148	-	86	58.876	ENSMPUG00000008938	PRDM15	87	63.889	Mustela_putorius_furo
ENSTNIG00000004148	-	86	75.000	ENSMLUG00000001078	PRDM15	68	75.000	Myotis_lucifugus
ENSTNIG00000004148	-	99	72.983	ENSNBRG00000018449	PRDM15	99	73.032	Neolamprologus_brichardi
ENSTNIG00000004148	-	99	92.857	ENSONIG00000011354	PRDM15	81	92.857	Oreochromis_niloticus
ENSTNIG00000004148	-	96	57.807	ENSOANG00000006445	PRDM15	84	68.023	Ornithorhynchus_anatinus
ENSTNIG00000004148	-	99	72.622	ENSORLG00000012533	PRDM15	98	72.227	Oryzias_latipes
ENSTNIG00000004148	-	99	72.405	ENSORLG00020014595	PRDM15	99	71.546	Oryzias_latipes_hni
ENSTNIG00000004148	-	99	72.542	ENSORLG00015021496	PRDM15	99	72.004	Oryzias_latipes_hsok
ENSTNIG00000004148	-	50	67.733	ENSOMEG00000011915	-	96	68.314	Oryzias_melastigma
ENSTNIG00000004148	-	96	59.180	ENSOGAG00000006444	PRDM15	85	69.186	Otolemur_garnettii
ENSTNIG00000004148	-	96	59.229	ENSOARG00000010468	PRDM15	85	65.195	Ovis_aries
ENSTNIG00000004148	-	96	60.303	ENSPPRG00000007591	PRDM15	84	70.930	Panthera_pardus
ENSTNIG00000004148	-	96	52.740	ENSPTIG00000019585	-	64	52.909	Panthera_tigris_altaica
ENSTNIG00000004148	-	99	66.057	ENSPKIG00000020637	PRDM15	89	73.256	Paramormyrops_kingsleyae
ENSTNIG00000004148	-	96	59.409	ENSPSIG00000006944	PRDM15	85	69.767	Pelodiscus_sinensis
ENSTNIG00000004148	-	87	77.955	ENSPMGG00000003004	PRDM15	100	77.689	Periophthalmus_magnuspinnatus
ENSTNIG00000004148	-	66	66.603	ENSPMAG00000009794	PRDM15	80	66.414	Petromyzon_marinus
ENSTNIG00000004148	-	96	59.269	ENSPCIG00000011005	PRDM15	87	68.605	Phascolarctos_cinereus
ENSTNIG00000004148	-	100	64.263	ENSPFOG00000014213	PRDM15	100	64.366	Poecilia_formosa
ENSTNIG00000004148	-	73	77.195	ENSPLAG00000016134	PRDM15	100	71.025	Poecilia_latipinna
ENSTNIG00000004148	-	100	69.686	ENSPMEG00000014510	PRDM15	99	68.986	Poecilia_mexicana
ENSTNIG00000004148	-	98	70.636	ENSPREG00000009745	PRDM15	88	83.439	Poecilia_reticulata
ENSTNIG00000004148	-	90	60.211	ENSPCAG00000009651	PRDM15	54	72.848	Procavia_capensis
ENSTNIG00000004148	-	96	59.517	ENSPCOG00000017473	PRDM15	84	69.186	Propithecus_coquereli
ENSTNIG00000004148	-	89	85.161	ENSPNYG00000022279	PRDM15	93	83.041	Pundamilia_nyererei
ENSTNIG00000004148	-	87	80.769	ENSPNAG00000021304	PRDM15	91	78.488	Pygocentrus_nattereri
ENSTNIG00000004148	-	69	66.623	ENSSHAG00000002844	-	98	64.277	Sarcophilus_harrisii
ENSTNIG00000004148	-	90	71.482	ENSSFOG00015013930	PRDM15	99	71.589	Scleropages_formosus
ENSTNIG00000004148	-	99	72.816	ENSSMAG00000001190	PRDM15	99	74.097	Scophthalmus_maximus
ENSTNIG00000004148	-	96	75.351	ENSSDUG00000018835	PRDM15	98	75.350	Seriola_dumerili
ENSTNIG00000004148	-	98	74.077	ENSSLDG00000004428	PRDM15	93	83.648	Seriola_lalandi_dorsalis
ENSTNIG00000004148	-	97	59.087	ENSSPUG00000013355	PRDM15	88	63.916	Sphenodon_punctatus
ENSTNIG00000004148	-	99	74.406	ENSSPAG00000010791	PRDM15	98	73.497	Stegastes_partitus
ENSTNIG00000004148	-	93	59.163	ENSSSCG00000012084	PRDM15	84	65.099	Sus_scrofa
ENSTNIG00000004148	-	96	57.956	ENSTGUG00000005437	PRDM15	100	57.692	Taeniopygia_guttata
ENSTNIG00000004148	-	89	79.717	ENSTRUG00000001452	PRDM15	99	80.121	Takifugu_rubripes
ENSTNIG00000004148	-	96	75.000	ENSTTRG00000012632	PRDM15	63	75.000	Tursiops_truncatus
ENSTNIG00000004148	-	96	59.679	ENSVVUG00000016527	PRDM15	86	67.021	Vulpes_vulpes
ENSTNIG00000004148	-	72	78.625	ENSXMAG00000013849	PRDM15	99	71.686	Xiphophorus_maculatus