EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000004220 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3715 bases
Position: chrUn_random:67603207-67606921
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006844	MMR_HSR1	PF01926.23	1.3e-06	1	1
ENSTNIP00000002308	MMR_HSR1	PF01926.23	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000006995	-	717	-	ENSTNIP00000006844	239 (aa)	-	H3CF20
ENSTNIT00000002634	-	720	-	ENSTNIP00000002308	240 (aa)	-	H3C240

Gene Model

Click here to download ENSTNIG00000004220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000004220	-	78	35.897	ENSTNIG00000005177	-	67	36.458
ENSTNIG00000004220	-	87	35.377	ENSTNIG00000001262	-	99	35.377
ENSTNIG00000004220	-	84	34.135	ENSTNIG00000000853	-	82	34.135
ENSTNIG00000004220	-	76	37.755	ENSTNIG00000010832	-	84	37.755
ENSTNIG00000004220	-	92	78.182	ENSTNIG00000004275	-	92	78.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004220	-	91	40.092	ENSAPOG00000006502	-	50	40.092	Acanthochromis_polyacanthus
ENSTNIG00000004220	-	90	45.370	ENSAPOG00000019154	-	59	45.370	Acanthochromis_polyacanthus
ENSTNIG00000004220	-	80	54.124	ENSACIG00000007725	-	71	54.124	Amphilophus_citrinellus
ENSTNIG00000004220	-	74	42.938	ENSACIG00000007737	-	76	42.929	Amphilophus_citrinellus
ENSTNIG00000004220	-	77	47.568	ENSACIG00000009811	-	77	47.568	Amphilophus_citrinellus
ENSTNIG00000004220	-	92	38.261	ENSAOCG00000003425	-	87	38.261	Amphiprion_ocellaris
ENSTNIG00000004220	-	91	48.205	ENSAOCG00000004579	-	82	47.312	Amphiprion_ocellaris
ENSTNIG00000004220	-	87	48.352	ENSAPEG00000014403	-	66	48.352	Amphiprion_percula
ENSTNIG00000004220	-	94	66.667	ENSAPEG00000001491	-	66	66.667	Amphiprion_percula
ENSTNIG00000004220	-	78	48.108	ENSATEG00000015654	-	65	48.108	Anabas_testudineus
ENSTNIG00000004220	-	85	60.976	ENSATEG00000023053	-	91	60.976	Anabas_testudineus
ENSTNIG00000004220	-	90	45.455	ENSACLG00000014795	-	66	48.634	Astatotilapia_calliptera
ENSTNIG00000004220	-	92	42.342	ENSAMXG00000019109	-	92	42.342	Astyanax_mexicanus
ENSTNIG00000004220	-	86	49.462	ENSAMXG00000030744	-	83	47.716	Astyanax_mexicanus
ENSTNIG00000004220	-	82	41.081	ENSAMXG00000033117	-	81	38.298	Astyanax_mexicanus
ENSTNIG00000004220	-	74	44.444	ENSAMXG00000026085	-	68	44.271	Astyanax_mexicanus
ENSTNIG00000004220	-	97	40.541	ENSAMXG00000006064	-	77	40.541	Astyanax_mexicanus
ENSTNIG00000004220	-	76	40.437	ENSAMXG00000009216	-	88	40.437	Astyanax_mexicanus
ENSTNIG00000004220	-	81	47.568	ENSAMXG00000021387	-	61	47.568	Astyanax_mexicanus
ENSTNIG00000004220	-	93	50.230	ENSCSEG00000021519	-	88	55.340	Cynoglossus_semilaevis
ENSTNIG00000004220	-	76	47.312	ENSCVAG00000005778	-	65	47.312	Cyprinodon_variegatus
ENSTNIG00000004220	-	92	49.776	ENSCVAG00000003054	-	75	49.776	Cyprinodon_variegatus
ENSTNIG00000004220	-	93	45.852	ENSCVAG00000012268	-	72	45.852	Cyprinodon_variegatus
ENSTNIG00000004220	-	83	43.719	ENSDARG00000102683	CR626941.1	75	43.719	Danio_rerio
ENSTNIG00000004220	-	93	54.545	ENSDARG00000063481	si:ch211-214j24.15	64	50.667	Danio_rerio
ENSTNIG00000004220	-	88	33.641	ENSELUG00000003217	-	89	33.641	Esox_lucius
ENSTNIG00000004220	-	92	50.450	ENSELUG00000024502	-	76	52.195	Esox_lucius
ENSTNIG00000004220	-	79	55.319	ENSELUG00000018192	-	90	55.319	Esox_lucius
ENSTNIG00000004220	-	76	46.237	ENSELUG00000018709	-	69	41.810	Esox_lucius
ENSTNIG00000004220	-	86	45.304	ENSFHEG00000020783	-	85	45.304	Fundulus_heteroclitus
ENSTNIG00000004220	-	77	57.527	ENSFHEG00000023334	-	71	57.527	Fundulus_heteroclitus
ENSTNIG00000004220	-	93	62.088	ENSGMOG00000001626	-	100	67.039	Gadus_morhua
ENSTNIG00000004220	-	76	46.328	ENSGAFG00000020826	-	82	46.328	Gambusia_affinis
ENSTNIG00000004220	-	91	39.171	ENSHBUG00000001242	-	51	45.405	Haplochromis_burtoni
ENSTNIG00000004220	-	81	55.135	ENSHBUG00000008326	-	93	49.545	Haplochromis_burtoni
ENSTNIG00000004220	-	76	48.634	ENSHBUG00000016284	-	85	48.634	Haplochromis_burtoni
ENSTNIG00000004220	-	87	40.465	ENSIPUG00000013342	-	72	40.086	Ictalurus_punctatus
ENSTNIG00000004220	-	78	49.206	ENSKMAG00000004774	-	64	49.206	Kryptolebias_marmoratus
ENSTNIG00000004220	-	80	55.385	ENSKMAG00000009600	-	67	55.385	Kryptolebias_marmoratus
ENSTNIG00000004220	-	79	42.935	ENSKMAG00000014764	-	79	42.935	Kryptolebias_marmoratus
ENSTNIG00000004220	-	90	41.935	ENSKMAG00000014605	-	71	41.935	Kryptolebias_marmoratus
ENSTNIG00000004220	-	91	43.182	ENSLBEG00000019652	-	75	43.182	Labrus_bergylta
ENSTNIG00000004220	-	81	46.970	ENSLOCG00000000517	-	70	43.913	Lepisosteus_oculatus
ENSTNIG00000004220	-	76	51.366	ENSLOCG00000017852	-	68	51.366	Lepisosteus_oculatus
ENSTNIG00000004220	-	80	53.886	ENSLOCG00000018072	-	77	53.886	Lepisosteus_oculatus
ENSTNIG00000004220	-	81	45.918	ENSLOCG00000000385	-	68	43.810	Lepisosteus_oculatus
ENSTNIG00000004220	-	99	40.336	ENSLOCG00000016496	-	66	40.336	Lepisosteus_oculatus
ENSTNIG00000004220	-	80	48.705	ENSLOCG00000000082	-	84	43.723	Lepisosteus_oculatus
ENSTNIG00000004220	-	82	44.724	ENSLOCG00000012075	-	91	45.729	Lepisosteus_oculatus
ENSTNIG00000004220	-	92	74.074	ENSMAMG00000021969	-	53	55.670	Mastacembelus_armatus
ENSTNIG00000004220	-	75	61.453	ENSMAMG00000021970	-	80	61.453	Mastacembelus_armatus
ENSTNIG00000004220	-	85	48.108	ENSMAMG00000015600	-	70	48.108	Mastacembelus_armatus
ENSTNIG00000004220	-	82	50.000	ENSMMOG00000016860	-	77	50.000	Mola_mola
ENSTNIG00000004220	-	93	47.273	ENSMMOG00000016864	-	70	47.273	Mola_mola
ENSTNIG00000004220	-	81	47.692	ENSMMOG00000012876	-	61	47.692	Mola_mola
ENSTNIG00000004220	-	83	45.500	ENSNBRG00000002136	-	69	45.500	Neolamprologus_brichardi
ENSTNIG00000004220	-	85	44.615	ENSORLG00000002031	-	63	44.615	Oryzias_latipes
ENSTNIG00000004220	-	93	61.714	ENSORLG00000002537	-	59	68.927	Oryzias_latipes
ENSTNIG00000004220	-	91	68.362	ENSORLG00020011284	-	74	67.778	Oryzias_latipes_hni
ENSTNIG00000004220	-	82	47.283	ENSORLG00020008286	-	74	47.283	Oryzias_latipes_hni
ENSTNIG00000004220	-	81	37.436	ENSORLG00020017387	-	83	37.436	Oryzias_latipes_hni
ENSTNIG00000004220	-	85	44.103	ENSORLG00020008323	-	62	44.103	Oryzias_latipes_hni
ENSTNIG00000004220	-	77	38.378	ENSORLG00015023234	-	95	38.378	Oryzias_latipes_hsok
ENSTNIG00000004220	-	82	44.615	ENSORLG00015004522	-	58	44.615	Oryzias_latipes_hsok
ENSTNIG00000004220	-	92	68.927	ENSORLG00015004110	-	62	68.927	Oryzias_latipes_hsok
ENSTNIG00000004220	-	93	45.178	ENSOMEG00000010594	-	83	47.644	Oryzias_melastigma
ENSTNIG00000004220	-	92	57.979	ENSOMEG00000020433	-	83	58.874	Oryzias_melastigma
ENSTNIG00000004220	-	89	52.582	ENSPKIG00000017688	-	73	52.582	Paramormyrops_kingsleyae
ENSTNIG00000004220	-	84	53.731	ENSPKIG00000017193	-	86	53.731	Paramormyrops_kingsleyae
ENSTNIG00000004220	-	82	38.191	ENSPMGG00000017993	-	79	38.191	Periophthalmus_magnuspinnatus
ENSTNIG00000004220	-	82	52.020	ENSPMGG00000014055	-	83	48.780	Periophthalmus_magnuspinnatus
ENSTNIG00000004220	-	89	46.729	ENSPMGG00000014056	-	77	52.020	Periophthalmus_magnuspinnatus
ENSTNIG00000004220	-	85	47.849	ENSPFOG00000016787	-	82	47.849	Poecilia_formosa
ENSTNIG00000004220	-	100	43.612	ENSPFOG00000012732	-	75	43.612	Poecilia_formosa
ENSTNIG00000004220	-	80	42.784	ENSPFOG00000006124	-	84	42.784	Poecilia_formosa
ENSTNIG00000004220	-	88	44.495	ENSPFOG00000013349	-	74	44.495	Poecilia_formosa
ENSTNIG00000004220	-	83	47.423	ENSPFOG00000015865	-	83	47.423	Poecilia_formosa
ENSTNIG00000004220	-	84	49.223	ENSPFOG00000013109	-	85	49.223	Poecilia_formosa
ENSTNIG00000004220	-	76	43.915	ENSPFOG00000022479	-	78	43.915	Poecilia_formosa
ENSTNIG00000004220	-	83	45.274	ENSPFOG00000005689	si:dkey-185m8.2	71	45.274	Poecilia_formosa
ENSTNIG00000004220	-	78	45.789	ENSPFOG00000022853	-	82	45.789	Poecilia_formosa
ENSTNIG00000004220	-	92	44.298	ENSPFOG00000015875	-	78	43.779	Poecilia_formosa
ENSTNIG00000004220	-	87	42.593	ENSPFOG00000015871	-	81	42.593	Poecilia_formosa
ENSTNIG00000004220	-	87	45.455	ENSPFOG00000000191	-	68	45.455	Poecilia_formosa
ENSTNIG00000004220	-	77	38.627	ENSPLAG00000018692	-	84	37.872	Poecilia_latipinna
ENSTNIG00000004220	-	96	36.145	ENSPLAG00000018664	-	88	36.400	Poecilia_latipinna
ENSTNIG00000004220	-	87	46.296	ENSPLAG00000003020	-	83	46.296	Poecilia_latipinna
ENSTNIG00000004220	-	86	48.404	ENSPLAG00000020776	-	85	47.959	Poecilia_latipinna
ENSTNIG00000004220	-	91	40.553	ENSPLAG00000018606	-	83	40.553	Poecilia_latipinna
ENSTNIG00000004220	-	73	45.763	ENSPLAG00000018911	-	66	45.763	Poecilia_latipinna
ENSTNIG00000004220	-	83	40.845	ENSPMEG00000020252	-	92	40.845	Poecilia_mexicana
ENSTNIG00000004220	-	83	41.509	ENSPMEG00000010605	-	85	41.509	Poecilia_mexicana
ENSTNIG00000004220	-	76	40.476	ENSPMEG00000000724	-	57	39.904	Poecilia_mexicana
ENSTNIG00000004220	-	87	42.396	ENSPMEG00000020297	-	77	42.396	Poecilia_mexicana
ENSTNIG00000004220	-	95	46.500	ENSPMEG00000005912	-	74	46.500	Poecilia_mexicana
ENSTNIG00000004220	-	73	45.763	ENSPMEG00000018950	-	66	45.763	Poecilia_mexicana
ENSTNIG00000004220	-	77	43.979	ENSPMEG00000006334	-	67	43.979	Poecilia_mexicana
ENSTNIG00000004220	-	94	45.161	ENSPMEG00000000604	-	71	45.161	Poecilia_mexicana
ENSTNIG00000004220	-	79	48.148	ENSPREG00000020440	-	65	48.148	Poecilia_reticulata
ENSTNIG00000004220	-	94	41.949	ENSPREG00000001250	-	93	41.949	Poecilia_reticulata
ENSTNIG00000004220	-	96	46.119	ENSPREG00000001530	-	71	46.119	Poecilia_reticulata
ENSTNIG00000004220	-	90	44.240	ENSPNYG00000010004	-	77	44.240	Pundamilia_nyererei
ENSTNIG00000004220	-	80	42.784	ENSPNAG00000019899	-	78	42.708	Pygocentrus_nattereri
ENSTNIG00000004220	-	78	47.573	ENSPNAG00000014932	-	57	47.573	Pygocentrus_nattereri
ENSTNIG00000004220	-	90	47.685	ENSPNAG00000002097	-	84	47.685	Pygocentrus_nattereri
ENSTNIG00000004220	-	77	41.146	ENSPNAG00000025850	-	68	41.327	Pygocentrus_nattereri
ENSTNIG00000004220	-	80	44.262	ENSPNAG00000013132	-	62	44.262	Pygocentrus_nattereri
ENSTNIG00000004220	-	87	42.453	ENSSFOG00015002420	-	81	42.453	Scleropages_formosus
ENSTNIG00000004220	-	77	40.107	ENSSFOG00015002507	-	72	40.107	Scleropages_formosus
ENSTNIG00000004220	-	80	37.186	ENSSFOG00015002503	-	74	37.186	Scleropages_formosus
ENSTNIG00000004220	-	93	85.185	ENSSMAG00000012187	-	61	85.185	Scophthalmus_maximus
ENSTNIG00000004220	-	93	51.556	ENSSDUG00000022299	-	84	51.556	Seriola_dumerili
ENSTNIG00000004220	-	89	46.939	ENSSLDG00000010531	-	84	46.939	Seriola_lalandi_dorsalis
ENSTNIG00000004220	-	90	64.737	ENSSLDG00000005786	-	61	64.737	Seriola_lalandi_dorsalis
ENSTNIG00000004220	-	83	51.220	ENSSLDG00000009168	-	81	51.220	Seriola_lalandi_dorsalis
ENSTNIG00000004220	-	90	44.907	ENSSPAG00000015927	-	87	44.907	Stegastes_partitus
ENSTNIG00000004220	-	80	55.385	ENSSPAG00000017616	-	72	55.385	Stegastes_partitus
ENSTNIG00000004220	-	77	50.270	ENSTRUG00000018070	-	64	50.532	Takifugu_rubripes
ENSTNIG00000004220	-	77	70.109	ENSTRUG00000020422	-	63	70.109	Takifugu_rubripes
ENSTNIG00000004220	-	82	44.500	ENSXCOG00000009005	-	75	44.776	Xiphophorus_couchianus
ENSTNIG00000004220	-	87	42.593	ENSXCOG00000018421	-	93	42.593	Xiphophorus_couchianus
ENSTNIG00000004220	-	92	45.685	ENSXMAG00000023360	-	72	45.685	Xiphophorus_maculatus