EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000004346 (Gene tree)
Gene ID: -
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 8149 bases
Position: chrUn_random:68466710-68474858
Accession: ZDB-GENE-120314-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000006981	ResIII	PF04851.15	4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007135	-	2991	-	ENSTNIP00000006981	997 (aa)	-	H3CFF7

Gene Model

Click here to download ENSTNIG00000004346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000004346	chd5	99	69.732	ENSTNIG00000012998	chd3	53	69.665
ENSTNIG00000004346	chd5	99	68.555	ENSTNIG00000004095	-	53	74.130
ENSTNIG00000004346	chd5	99	69.068	ENSTNIG00000008031	-	57	69.436

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004346	chd5	99	81.256	ENSG00000116254	CHD5	75	92.771	Homo_sapiens
ENSTNIG00000004346	chd5	99	80.411	ENSAMEG00000009880	CHD5	53	80.078	Ailuropoda_melanoleuca
ENSTNIG00000004346	chd5	100	90.542	ENSACIG00000012582	chd5	55	90.640	Amphilophus_citrinellus
ENSTNIG00000004346	chd5	99	91.412	ENSAOCG00000020356	chd5	50	91.519	Amphiprion_ocellaris
ENSTNIG00000004346	chd5	100	73.720	ENSAPLG00000015475	CHD5	55	73.359	Anas_platyrhynchos
ENSTNIG00000004346	chd5	100	79.253	ENSACAG00000002441	CHD5	52	78.269	Anolis_carolinensis
ENSTNIG00000004346	chd5	96	81.455	ENSANAG00000001078	CHD5	52	80.840	Aotus_nancymaae
ENSTNIG00000004346	chd5	99	87.660	ENSACLG00000003012	chd5	55	87.771	Astatotilapia_calliptera
ENSTNIG00000004346	chd5	96	84.449	ENSAMXG00000008921	chd5	57	84.671	Astyanax_mexicanus
ENSTNIG00000004346	chd5	99	80.915	ENSBTAG00000040477	CHD5	55	80.575	Bos_taurus
ENSTNIG00000004346	chd5	99	81.158	ENSCJAG00000000101	CHD5	52	80.588	Callithrix_jacchus
ENSTNIG00000004346	chd5	99	81.349	ENSCAFG00000019545	CHD5	85	81.134	Canis_familiaris
ENSTNIG00000004346	chd5	99	81.275	ENSCAFG00020008689	CHD5	52	81.036	Canis_lupus_dingo
ENSTNIG00000004346	chd5	99	80.747	ENSCHIG00000015027	CHD5	51	80.724	Capra_hircus
ENSTNIG00000004346	chd5	99	76.167	ENSTSYG00000033991	CHD5	52	75.938	Carlito_syrichta
ENSTNIG00000004346	chd5	99	81.219	ENSCAPG00000009294	CHD5	54	80.528	Cavia_aperea
ENSTNIG00000004346	chd5	99	81.219	ENSCPOG00000025080	CHD5	54	80.528	Cavia_porcellus
ENSTNIG00000004346	chd5	99	81.354	ENSCCAG00000024756	CHD5	81	78.424	Cebus_capucinus
ENSTNIG00000004346	chd5	99	81.478	ENSCATG00000043011	CHD5	53	80.686	Cercocebus_atys
ENSTNIG00000004346	chd5	99	81.256	ENSCLAG00000010589	CHD5	54	80.724	Chinchilla_lanigera
ENSTNIG00000004346	chd5	99	81.354	ENSCSAG00000000733	CHD5	52	80.784	Chlorocebus_sabaeus
ENSTNIG00000004346	chd5	99	80.716	ENSCPBG00000019363	CHD5	55	80.318	Chrysemys_picta_bellii
ENSTNIG00000004346	chd5	99	81.354	ENSCANG00000032302	CHD5	52	80.784	Colobus_angolensis_palliatus
ENSTNIG00000004346	chd5	99	80.338	ENSCGRG00001011042	Chd5	95	79.901	Cricetulus_griseus_chok1gshd
ENSTNIG00000004346	chd5	99	80.569	ENSCGRG00000011341	Chd5	54	80.431	Cricetulus_griseus_crigri
ENSTNIG00000004346	chd5	99	86.686	ENSDARG00000105083	chd5	51	87.094	Danio_rerio
ENSTNIG00000004346	chd5	99	68.286	ENSDARG00000025789	chd4b	53	68.411	Danio_rerio
ENSTNIG00000004346	chd5	99	81.238	ENSDNOG00000046342	CHD5	52	80.509	Dasypus_novemcinctus
ENSTNIG00000004346	chd5	99	80.490	ENSDORG00000005923	Chd5	54	79.746	Dipodomys_ordii
ENSTNIG00000004346	chd5	99	79.371	ENSEASG00005021464	CHD5	60	78.046	Equus_asinus_asinus
ENSTNIG00000004346	chd5	99	79.582	ENSECAG00000025043	CHD5	60	79.061	Equus_caballus
ENSTNIG00000004346	chd5	99	84.366	ENSELUG00000010742	chd5	56	84.283	Esox_lucius
ENSTNIG00000004346	chd5	99	80.784	ENSFCAG00000006319	CHD5	52	80.626	Felis_catus
ENSTNIG00000004346	chd5	99	80.196	ENSFALG00000009740	CHD5	52	79.395	Ficedula_albicollis
ENSTNIG00000004346	chd5	99	80.864	ENSFDAG00000012881	CHD5	53	80.333	Fukomys_damarensis
ENSTNIG00000004346	chd5	99	80.962	ENSGALG00000000747	CHD5	52	80.980	Gallus_gallus
ENSTNIG00000004346	chd5	99	88.856	ENSGACG00000004389	chd5	87	89.163	Gasterosteus_aculeatus
ENSTNIG00000004346	chd5	99	79.212	ENSGAGG00000001590	CHD5	82	78.627	Gopherus_agassizii
ENSTNIG00000004346	chd5	99	81.256	ENSGGOG00000000708	CHD5	83	78.835	Gorilla_gorilla
ENSTNIG00000004346	chd5	99	84.630	ENSHBUG00000013453	chd5	54	84.742	Haplochromis_burtoni
ENSTNIG00000004346	chd5	99	80.765	ENSHGLG00000018184	CHD5	54	80.528	Heterocephalus_glaber_female
ENSTNIG00000004346	chd5	99	72.410	ENSHGLG00100013261	CHD5	51	72.095	Heterocephalus_glaber_male
ENSTNIG00000004346	chd5	99	85.446	ENSIPUG00000005446	chd5	84	84.562	Ictalurus_punctatus
ENSTNIG00000004346	chd5	99	81.060	ENSSTOG00000002778	CHD5	54	80.431	Ictidomys_tridecemlineatus
ENSTNIG00000004346	chd5	99	81.041	ENSJJAG00000019072	Chd5	53	80.509	Jaculus_jaculus
ENSTNIG00000004346	chd5	67	85.224	ENSLACG00000022233	-	99	84.302	Latimeria_chalumnae
ENSTNIG00000004346	chd5	99	85.277	ENSLOCG00000004944	chd5	52	86.095	Lepisosteus_oculatus
ENSTNIG00000004346	chd5	99	81.158	ENSLAFG00000006348	CHD5	57	78.613	Loxodonta_africana
ENSTNIG00000004346	chd5	99	81.430	ENSMFAG00000033993	CHD5	55	80.834	Macaca_fascicularis
ENSTNIG00000004346	chd5	99	81.354	ENSMMUG00000016838	CHD5	53	80.784	Macaca_mulatta
ENSTNIG00000004346	chd5	99	81.354	ENSMNEG00000040044	CHD5	52	80.784	Macaca_nemestrina
ENSTNIG00000004346	chd5	99	79.310	ENSMLEG00000039166	CHD5	54	78.756	Mandrillus_leucophaeus
ENSTNIG00000004346	chd5	99	87.660	ENSMZEG00005000841	chd5	55	87.771	Maylandia_zebra
ENSTNIG00000004346	chd5	99	80.882	ENSMGAG00000001055	CHD5	52	80.901	Meleagris_gallopavo
ENSTNIG00000004346	chd5	99	81.551	ENSMICG00000017862	CHD5	54	80.980	Microcebus_murinus
ENSTNIG00000004346	chd5	99	80.747	ENSMOCG00000011049	Chd5	53	80.509	Microtus_ochrogaster
ENSTNIG00000004346	chd5	99	91.313	ENSMALG00000002831	chd5	53	91.321	Monopterus_albus
ENSTNIG00000004346	chd5	99	80.747	MGP_CAROLIEiJ_G0026857	Chd5	52	80.607	Mus_caroli
ENSTNIG00000004346	chd5	99	80.709	ENSMUSG00000005045	Chd5	53	80.509	Mus_musculus
ENSTNIG00000004346	chd5	99	80.709	MGP_PahariEiJ_G0029205	Chd5	53	80.509	Mus_pahari
ENSTNIG00000004346	chd5	99	80.709	MGP_SPRETEiJ_G0027850	Chd5	53	80.509	Mus_spretus
ENSTNIG00000004346	chd5	99	81.354	ENSMPUG00000007122	CHD5	51	80.822	Mustela_putorius_furo
ENSTNIG00000004346	chd5	99	80.413	ENSNGAG00000019812	Chd5	51	80.411	Nannospalax_galili
ENSTNIG00000004346	chd5	99	80.667	ENSNLEG00000010320	CHD5	83	80.392	Nomascus_leucogenys
ENSTNIG00000004346	chd5	99	81.139	ENSODEG00000010262	CHD5	54	80.705	Octodon_degus
ENSTNIG00000004346	chd5	99	90.301	ENSONIG00000000619	chd5	53	90.407	Oreochromis_niloticus
ENSTNIG00000004346	chd5	99	64.237	ENSOANG00000001819	CHD5	53	65.243	Ornithorhynchus_anatinus
ENSTNIG00000004346	chd5	99	81.238	ENSOGAG00000005703	CHD5	52	80.747	Otolemur_garnettii
ENSTNIG00000004346	chd5	99	80.667	ENSOARG00000013425	CHD5	53	80.450	Ovis_aries
ENSTNIG00000004346	chd5	99	81.176	ENSPPAG00000034048	CHD5	53	80.803	Pan_paniscus
ENSTNIG00000004346	chd5	99	80.784	ENSPPRG00000009453	CHD5	52	80.626	Panthera_pardus
ENSTNIG00000004346	chd5	99	74.045	ENSPTIG00000013926	CHD5	51	74.096	Panthera_tigris_altaica
ENSTNIG00000004346	chd5	99	81.176	ENSPTRG00000000075	CHD5	52	80.803	Pan_troglodytes
ENSTNIG00000004346	chd5	99	81.354	ENSPANG00000006765	CHD5	52	80.784	Papio_anubis
ENSTNIG00000004346	chd5	99	83.909	ENSPKIG00000004282	chd5	55	84.024	Paramormyrops_kingsleyae
ENSTNIG00000004346	chd5	99	79.314	ENSPSIG00000006414	CHD5	54	78.824	Pelodiscus_sinensis
ENSTNIG00000004346	chd5	99	80.118	ENSPEMG00000014799	Chd5	78	80.215	Peromyscus_maniculatus_bairdii
ENSTNIG00000004346	chd5	99	81.041	ENSPCIG00000028310	CHD5	53	80.569	Phascolarctos_cinereus
ENSTNIG00000004346	chd5	91	97.436	ENSPLAG00000005343	chd5	50	96.296	Poecilia_latipinna
ENSTNIG00000004346	chd5	99	81.452	ENSPPYG00000001952	CHD5	55	80.882	Pongo_abelii
ENSTNIG00000004346	chd5	99	81.551	ENSPCOG00000022930	CHD5	52	80.980	Propithecus_coquereli
ENSTNIG00000004346	chd5	99	89.832	ENSPNYG00000003183	chd5	53	89.941	Pundamilia_nyererei
ENSTNIG00000004346	chd5	99	80.648	ENSRNOG00000011268	Chd5	53	80.509	Rattus_norvegicus
ENSTNIG00000004346	chd5	100	81.078	ENSRBIG00000032140	CHD5	53	80.735	Rhinopithecus_bieti
ENSTNIG00000004346	chd5	99	81.158	ENSRROG00000041146	CHD5	52	80.588	Rhinopithecus_roxellana
ENSTNIG00000004346	chd5	99	76.130	ENSSBOG00000001955	CHD5	51	82.870	Saimiri_boliviensis_boliviensis
ENSTNIG00000004346	chd5	99	80.607	ENSSHAG00000018641	CHD5	56	79.843	Sarcophilus_harrisii
ENSTNIG00000004346	chd5	99	87.747	ENSSFOG00015006296	chd5	51	87.771	Scleropages_formosus
ENSTNIG00000004346	chd5	99	89.437	ENSSDUG00000017526	chd5	57	89.009	Seriola_dumerili
ENSTNIG00000004346	chd5	100	75.122	ENSSPUG00000010622	CHD5	54	74.366	Sphenodon_punctatus
ENSTNIG00000004346	chd5	99	81.231	ENSSSCG00000003366	CHD5	55	80.636	Sus_scrofa
ENSTNIG00000004346	chd5	99	75.631	ENSTGUG00000002634	-	56	75.581	Taeniopygia_guttata
ENSTNIG00000004346	chd5	99	80.471	ENSTTRG00000010468	CHD5	53	80.039	Tursiops_truncatus
ENSTNIG00000004346	chd5	99	81.569	ENSUAMG00000024509	CHD5	86	81.232	Ursus_americanus
ENSTNIG00000004346	chd5	99	77.910	ENSUMAG00000024173	CHD5	86	77.579	Ursus_maritimus
ENSTNIG00000004346	chd5	99	79.530	ENSVVUG00000026480	CHD5	58	78.193	Vulpes_vulpes
ENSTNIG00000004346	chd5	99	78.089	ENSXETG00000002904	chd5	56	77.703	Xenopus_tropicalis
ENSTNIG00000004346	chd5	99	88.276	ENSXCOG00000014202	chd5	89	88.363	Xiphophorus_couchianus