EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000004408 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2363 bases
Position: chrUn_random:69248769-69251131
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000007043	DEAD	PF00270.29	5.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007200	-	879	-	ENSTNIP00000007043	292 (aa)	-	H3CFL6

Gene Model

Click here to download ENSTNIG00000004408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004408's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000004408	-	99	46.392	ENSTNIG00000000303	-	73	46.392
ENSTNIG00000004408	-	100	65.870	ENSTNIG00000002924	eif4a3	70	65.870
ENSTNIG00000004408	-	90	35.636	ENSTNIG00000006247	-	51	35.636
ENSTNIG00000004408	-	91	32.852	ENSTNIG00000010188	ddx49	58	32.155
ENSTNIG00000004408	-	100	68.151	ENSTNIG00000007405	-	71	68.151
ENSTNIG00000004408	-	100	64.041	ENSTNIG00000017079	-	82	64.041
ENSTNIG00000004408	-	86	68.898	ENSTNIG00000007821	eif4a2	63	68.898
ENSTNIG00000004408	-	92	38.060	ENSTNIG00000016295	ddx6	55	38.060
ENSTNIG00000004408	-	93	30.466	ENSTNIG00000014514	-	68	30.466
ENSTNIG00000004408	-	87	39.163	ENSTNIG00000005790	ddx19	53	39.163
ENSTNIG00000004408	-	100	67.808	ENSTNIG00000006865	-	76	67.808
ENSTNIG00000004408	-	85	41.379	ENSTNIG00000012417	zgc:193690	59	40.672
ENSTNIG00000004408	-	93	38.745	ENSTNIG00000003560	-	56	38.745

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004408	-	100	77.740	ENSG00000161960	EIF4A1	98	85.217	Homo_sapiens
ENSTNIG00000004408	-	100	77.740	ENSAMEG00000016753	EIF4A1	72	77.740	Ailuropoda_melanoleuca
ENSTNIG00000004408	-	76	63.158	ENSACAG00000005524	EIF4A1	66	63.158	Anolis_carolinensis
ENSTNIG00000004408	-	100	65.068	ENSANAG00000023841	-	74	65.068	Aotus_nancymaae
ENSTNIG00000004408	-	100	66.781	ENSANAG00000021271	-	70	66.781	Aotus_nancymaae
ENSTNIG00000004408	-	83	55.967	ENSANAG00000015362	-	66	55.967	Aotus_nancymaae
ENSTNIG00000004408	-	100	77.740	ENSANAG00000035392	EIF4A1	72	77.740	Aotus_nancymaae
ENSTNIG00000004408	-	100	77.740	ENSBTAG00000000132	EIF4A1	72	77.740	Bos_taurus
ENSTNIG00000004408	-	100	67.466	WBGene00002083	inf-1	72	67.466	Caenorhabditis_elegans
ENSTNIG00000004408	-	76	75.336	ENSCJAG00000020470	-	66	75.336	Callithrix_jacchus
ENSTNIG00000004408	-	100	77.740	ENSCJAG00000015114	EIF4A1	72	77.740	Callithrix_jacchus
ENSTNIG00000004408	-	100	77.740	ENSCAFG00000016632	EIF4A1	72	77.740	Canis_familiaris
ENSTNIG00000004408	-	100	77.740	ENSCAFG00000004690	-	72	77.740	Canis_familiaris
ENSTNIG00000004408	-	100	77.740	ENSCAFG00020007858	EIF4A1	79	77.740	Canis_lupus_dingo
ENSTNIG00000004408	-	100	77.740	ENSCHIG00000022153	EIF4A1	72	77.740	Capra_hircus
ENSTNIG00000004408	-	100	77.740	ENSTSYG00000004557	EIF4A1	72	77.740	Carlito_syrichta
ENSTNIG00000004408	-	99	57.732	ENSTSYG00000035965	-	67	61.364	Carlito_syrichta
ENSTNIG00000004408	-	100	68.151	ENSTSYG00000028202	-	93	66.096	Carlito_syrichta
ENSTNIG00000004408	-	98	52.962	ENSCAPG00000000231	-	100	52.962	Cavia_aperea
ENSTNIG00000004408	-	98	77.700	ENSCAPG00000012540	EIF4A1	100	77.700	Cavia_aperea
ENSTNIG00000004408	-	100	77.740	ENSCPOG00000004900	-	73	77.740	Cavia_porcellus
ENSTNIG00000004408	-	98	52.962	ENSCPOG00000039987	-	100	52.962	Cavia_porcellus
ENSTNIG00000004408	-	100	70.205	ENSCCAG00000029117	-	70	76.667	Cebus_capucinus
ENSTNIG00000004408	-	83	71.488	ENSCCAG00000035301	-	63	71.488	Cebus_capucinus
ENSTNIG00000004408	-	100	60.274	ENSCCAG00000030287	-	72	60.274	Cebus_capucinus
ENSTNIG00000004408	-	98	55.052	ENSCATG00000034470	-	100	55.052	Cercocebus_atys
ENSTNIG00000004408	-	100	77.740	ENSCATG00000041861	EIF4A1	100	77.700	Cercocebus_atys
ENSTNIG00000004408	-	87	77.647	ENSCLAG00000006786	-	71	77.647	Chinchilla_lanigera
ENSTNIG00000004408	-	100	77.740	ENSCSAG00000011468	EIF4A1	72	77.740	Chlorocebus_sabaeus
ENSTNIG00000004408	-	75	77.169	ENSCPBG00000004702	EIF4A1	59	77.169	Chrysemys_picta_bellii
ENSTNIG00000004408	-	100	74.315	ENSCING00000010780	-	68	74.315	Ciona_intestinalis
ENSTNIG00000004408	-	99	73.883	ENSCSAVG00000000630	-	93	73.630	Ciona_savignyi
ENSTNIG00000004408	-	86	75.600	ENSCANG00000043402	-	64	75.600	Colobus_angolensis_palliatus
ENSTNIG00000004408	-	99	62.069	ENSCANG00000037365	-	72	62.069	Colobus_angolensis_palliatus
ENSTNIG00000004408	-	100	77.740	ENSCANG00000014450	EIF4A1	72	77.740	Colobus_angolensis_palliatus
ENSTNIG00000004408	-	100	67.808	ENSCGRG00001024111	-	71	67.808	Cricetulus_griseus_chok1gshd
ENSTNIG00000004408	-	100	77.740	ENSCGRG00001009326	Eif4a1	72	77.740	Cricetulus_griseus_chok1gshd
ENSTNIG00000004408	-	100	67.808	ENSCGRG00000017848	-	71	67.808	Cricetulus_griseus_crigri
ENSTNIG00000004408	-	100	77.740	ENSCGRG00000007204	Eif4a1	72	77.740	Cricetulus_griseus_crigri
ENSTNIG00000004408	-	93	67.518	ENSCGRG00000003437	-	70	67.518	Cricetulus_griseus_crigri
ENSTNIG00000004408	-	100	77.740	ENSDNOG00000044619	EIF4A1	72	77.740	Dasypus_novemcinctus
ENSTNIG00000004408	-	100	57.534	ENSDNOG00000049461	-	76	57.534	Dasypus_novemcinctus
ENSTNIG00000004408	-	100	77.740	ENSDORG00000014225	Eif4a1	72	77.740	Dipodomys_ordii
ENSTNIG00000004408	-	100	70.548	FBgn0001942	eIF4A	72	70.548	Drosophila_melanogaster
ENSTNIG00000004408	-	99	70.486	ENSETEG00000006701	-	71	70.486	Echinops_telfairi
ENSTNIG00000004408	-	100	77.740	ENSEASG00005019235	-	90	77.740	Equus_asinus_asinus
ENSTNIG00000004408	-	100	77.740	ENSECAG00000021478	EIF4A1	71	77.740	Equus_caballus
ENSTNIG00000004408	-	100	77.740	ENSEEUG00000003581	EIF4A1	72	77.740	Erinaceus_europaeus
ENSTNIG00000004408	-	100	77.740	ENSFCAG00000024897	EIF4A1	72	77.740	Felis_catus
ENSTNIG00000004408	-	72	75.556	ENSFCAG00000029768	-	58	75.556	Felis_catus
ENSTNIG00000004408	-	100	77.740	ENSFDAG00000008700	-	72	77.740	Fukomys_damarensis
ENSTNIG00000004408	-	100	78.082	ENSGAGG00000005277	EIF4A1	73	78.082	Gopherus_agassizii
ENSTNIG00000004408	-	98	74.035	ENSGGOG00000025897	-	87	63.504	Gorilla_gorilla
ENSTNIG00000004408	-	100	77.740	ENSGGOG00000024702	EIF4A1	72	77.740	Gorilla_gorilla
ENSTNIG00000004408	-	100	64.041	ENSGGOG00000024256	-	93	67.123	Gorilla_gorilla
ENSTNIG00000004408	-	99	60.554	ENSGGOG00000037488	-	76	60.554	Gorilla_gorilla
ENSTNIG00000004408	-	100	57.192	ENSHGLG00000015815	-	70	57.192	Heterocephalus_glaber_female
ENSTNIG00000004408	-	100	55.479	ENSHGLG00000000197	-	69	55.479	Heterocephalus_glaber_female
ENSTNIG00000004408	-	92	53.333	ENSHGLG00000009429	-	67	53.333	Heterocephalus_glaber_female
ENSTNIG00000004408	-	100	77.740	ENSHGLG00000011735	EIF4A1	72	77.740	Heterocephalus_glaber_female
ENSTNIG00000004408	-	100	77.740	ENSHGLG00100013114	EIF4A1	72	77.740	Heterocephalus_glaber_male
ENSTNIG00000004408	-	87	51.779	ENSHGLG00100000690	-	65	51.779	Heterocephalus_glaber_male
ENSTNIG00000004408	-	92	53.333	ENSHGLG00100002547	-	67	53.333	Heterocephalus_glaber_male
ENSTNIG00000004408	-	100	77.740	ENSSTOG00000024814	EIF4A1	75	77.740	Ictidomys_tridecemlineatus
ENSTNIG00000004408	-	100	77.740	ENSJJAG00000022783	-	73	77.740	Jaculus_jaculus
ENSTNIG00000004408	-	95	72.101	ENSJJAG00000022263	-	70	72.101	Jaculus_jaculus
ENSTNIG00000004408	-	99	67.698	ENSJJAG00000008682	-	69	67.698	Jaculus_jaculus
ENSTNIG00000004408	-	100	77.740	ENSLAFG00000001107	EIF4A1	72	77.740	Loxodonta_africana
ENSTNIG00000004408	-	98	61.324	ENSLAFG00000029547	-	100	61.324	Loxodonta_africana
ENSTNIG00000004408	-	100	77.740	ENSMFAG00000039010	EIF4A1	100	65.480	Macaca_fascicularis
ENSTNIG00000004408	-	83	78.099	ENSMFAG00000031996	-	70	75.342	Macaca_fascicularis
ENSTNIG00000004408	-	68	64.500	ENSMFAG00000034128	-	66	64.500	Macaca_fascicularis
ENSTNIG00000004408	-	100	77.740	ENSMMUG00000013499	-	71	77.740	Macaca_mulatta
ENSTNIG00000004408	-	74	61.860	ENSMMUG00000038680	-	65	61.860	Macaca_mulatta
ENSTNIG00000004408	-	100	77.397	ENSMNEG00000035880	EIF4A1	72	77.397	Macaca_nemestrina
ENSTNIG00000004408	-	100	56.849	ENSMNEG00000030284	-	68	65.000	Macaca_nemestrina
ENSTNIG00000004408	-	100	56.507	ENSMLEG00000040863	-	73	56.507	Mandrillus_leucophaeus
ENSTNIG00000004408	-	100	77.740	ENSMLEG00000032647	EIF4A1	72	77.740	Mandrillus_leucophaeus
ENSTNIG00000004408	-	98	57.491	ENSMAUG00000000782	Eif4a1	100	57.491	Mesocricetus_auratus
ENSTNIG00000004408	-	98	63.509	ENSMICG00000044950	-	93	63.509	Microcebus_murinus
ENSTNIG00000004408	-	100	77.740	ENSMICG00000014759	EIF4A1	72	77.740	Microcebus_murinus
ENSTNIG00000004408	-	100	60.751	ENSMOCG00000012425	-	74	60.751	Microtus_ochrogaster
ENSTNIG00000004408	-	96	76.703	ENSMOCG00000004330	-	100	76.703	Microtus_ochrogaster
ENSTNIG00000004408	-	100	77.740	ENSMOCG00000007064	Eif4a1	72	77.740	Microtus_ochrogaster
ENSTNIG00000004408	-	100	77.397	ENSMODG00000007090	EIF4A1	72	77.397	Monodelphis_domestica
ENSTNIG00000004408	-	100	77.740	ENSMUSG00000059796	Eif4a1	72	77.740	Mus_musculus
ENSTNIG00000004408	-	100	77.740	ENSMPUG00000009529	-	71	77.740	Mustela_putorius_furo
ENSTNIG00000004408	-	100	77.740	ENSMLUG00000003415	-	71	77.740	Myotis_lucifugus
ENSTNIG00000004408	-	100	45.424	ENSMLUG00000027970	-	71	45.424	Myotis_lucifugus
ENSTNIG00000004408	-	100	77.740	ENSNGAG00000018330	Eif4a1	72	77.740	Nannospalax_galili
ENSTNIG00000004408	-	81	58.403	ENSNGAG00000017979	-	66	58.403	Nannospalax_galili
ENSTNIG00000004408	-	100	68.151	ENSNLEG00000000571	-	97	68.151	Nomascus_leucogenys
ENSTNIG00000004408	-	100	72.945	ENSNLEG00000018739	-	94	72.945	Nomascus_leucogenys
ENSTNIG00000004408	-	100	76.531	ENSNLEG00000009547	EIF4A1	72	76.531	Nomascus_leucogenys
ENSTNIG00000004408	-	100	67.466	ENSNLEG00000027059	-	100	64.057	Nomascus_leucogenys
ENSTNIG00000004408	-	88	62.109	ENSNLEG00000034508	-	99	62.109	Nomascus_leucogenys
ENSTNIG00000004408	-	100	67.123	ENSNLEG00000029784	-	93	67.123	Nomascus_leucogenys
ENSTNIG00000004408	-	83	78.926	ENSMEUG00000010780	EIF4A1	68	78.926	Notamacropus_eugenii
ENSTNIG00000004408	-	100	76.370	ENSOPRG00000008591	-	71	76.370	Ochotona_princeps
ENSTNIG00000004408	-	100	72.260	ENSODEG00000012713	-	70	72.260	Octodon_degus
ENSTNIG00000004408	-	98	74.216	ENSODEG00000019586	-	100	74.216	Octodon_degus
ENSTNIG00000004408	-	100	77.397	ENSODEG00000017512	-	72	77.397	Octodon_degus
ENSTNIG00000004408	-	100	69.178	ENSODEG00000006150	-	75	69.178	Octodon_degus
ENSTNIG00000004408	-	87	76.078	ENSOANG00000004333	EIF4A1	66	76.078	Ornithorhynchus_anatinus
ENSTNIG00000004408	-	100	72.945	ENSOCUG00000029227	-	92	72.945	Oryctolagus_cuniculus
ENSTNIG00000004408	-	100	77.740	ENSOCUG00000010375	EIF4A1	72	77.740	Oryctolagus_cuniculus
ENSTNIG00000004408	-	100	77.740	ENSOGAG00000008132	-	71	77.740	Otolemur_garnettii
ENSTNIG00000004408	-	100	77.474	ENSOARG00000014476	EIF4A1	72	77.474	Ovis_aries
ENSTNIG00000004408	-	85	76.707	ENSPPAG00000040878	-	85	76.707	Pan_paniscus
ENSTNIG00000004408	-	100	64.384	ENSPPAG00000038939	-	93	64.384	Pan_paniscus
ENSTNIG00000004408	-	100	77.740	ENSPPAG00000039921	EIF4A1	72	77.740	Pan_paniscus
ENSTNIG00000004408	-	99	60.208	ENSPPAG00000027347	-	74	60.208	Pan_paniscus
ENSTNIG00000004408	-	86	77.778	ENSPPAG00000035131	-	68	77.778	Pan_paniscus
ENSTNIG00000004408	-	100	77.740	ENSPPRG00000006906	EIF4A1	72	77.740	Panthera_pardus
ENSTNIG00000004408	-	100	77.740	ENSPTIG00000012373	-	73	77.740	Panthera_tigris_altaica
ENSTNIG00000004408	-	100	64.384	ENSPTRG00000048517	-	93	64.384	Pan_troglodytes
ENSTNIG00000004408	-	100	77.740	ENSPTRG00000008694	EIF4A1	72	77.740	Pan_troglodytes
ENSTNIG00000004408	-	74	74.654	ENSPTRG00000051629	-	66	74.654	Pan_troglodytes
ENSTNIG00000004408	-	98	73.333	ENSPTRG00000043870	-	65	73.333	Pan_troglodytes
ENSTNIG00000004408	-	99	60.554	ENSPTRG00000050879	-	74	60.554	Pan_troglodytes
ENSTNIG00000004408	-	100	77.740	ENSPANG00000024093	EIF4A1	72	77.740	Papio_anubis
ENSTNIG00000004408	-	100	78.082	ENSPSIG00000008719	EIF4A1	64	78.082	Pelodiscus_sinensis
ENSTNIG00000004408	-	100	78.425	ENSPMGG00000000195	EIF4A1	72	78.425	Periophthalmus_magnuspinnatus
ENSTNIG00000004408	-	100	72.603	ENSPEMG00000007594	-	74	72.603	Peromyscus_maniculatus_bairdii
ENSTNIG00000004408	-	75	73.636	ENSPEMG00000015813	-	60	73.636	Peromyscus_maniculatus_bairdii
ENSTNIG00000004408	-	100	77.740	ENSPEMG00000009100	Eif4a1	72	77.740	Peromyscus_maniculatus_bairdii
ENSTNIG00000004408	-	100	77.397	ENSPCIG00000028856	EIF4A1	93	77.397	Phascolarctos_cinereus
ENSTNIG00000004408	-	100	77.740	ENSPPYG00000007926	EIF4A1	72	77.740	Pongo_abelii
ENSTNIG00000004408	-	100	77.740	ENSPCAG00000012966	EIF4A1	72	77.740	Procavia_capensis
ENSTNIG00000004408	-	61	72.316	ENSPCOG00000026844	-	63	72.316	Propithecus_coquereli
ENSTNIG00000004408	-	100	77.740	ENSPCOG00000012349	EIF4A1	72	77.740	Propithecus_coquereli
ENSTNIG00000004408	-	100	77.740	ENSPVAG00000016297	EIF4A1	72	77.740	Pteropus_vampyrus
ENSTNIG00000004408	-	100	77.740	ENSRNOG00000030628	Eif4a1	72	77.740	Rattus_norvegicus
ENSTNIG00000004408	-	100	68.493	ENSRBIG00000021813	-	100	62.989	Rhinopithecus_bieti
ENSTNIG00000004408	-	68	64.500	ENSRBIG00000041807	-	72	64.500	Rhinopithecus_bieti
ENSTNIG00000004408	-	83	77.686	ENSRBIG00000038269	-	69	77.344	Rhinopithecus_bieti
ENSTNIG00000004408	-	100	77.740	ENSRBIG00000044495	EIF4A1	73	77.740	Rhinopithecus_bieti
ENSTNIG00000004408	-	99	60.481	ENSRBIG00000040184	-	70	60.481	Rhinopithecus_bieti
ENSTNIG00000004408	-	99	69.444	ENSRROG00000004632	-	92	76.860	Rhinopithecus_roxellana
ENSTNIG00000004408	-	99	64.948	ENSRROG00000028953	-	68	69.874	Rhinopithecus_roxellana
ENSTNIG00000004408	-	100	77.740	ENSRROG00000032175	EIF4A1	73	77.740	Rhinopithecus_roxellana
ENSTNIG00000004408	-	62	69.444	ENSRROG00000008751	-	55	69.444	Rhinopithecus_roxellana
ENSTNIG00000004408	-	99	64.948	ENSSBOG00000032580	-	94	64.948	Saimiri_boliviensis_boliviensis
ENSTNIG00000004408	-	100	64.384	ENSSBOG00000027332	-	70	64.384	Saimiri_boliviensis_boliviensis
ENSTNIG00000004408	-	100	61.644	ENSSBOG00000020778	-	74	61.644	Saimiri_boliviensis_boliviensis
ENSTNIG00000004408	-	100	77.740	ENSSBOG00000023267	EIF4A1	72	77.740	Saimiri_boliviensis_boliviensis
ENSTNIG00000004408	-	98	54.704	ENSSBOG00000021265	-	100	54.704	Saimiri_boliviensis_boliviensis
ENSTNIG00000004408	-	100	77.397	ENSSHAG00000015756	EIF4A1	71	77.397	Sarcophilus_harrisii
ENSTNIG00000004408	-	100	77.740	ENSSARG00000006017	EIF4A1	72	77.740	Sorex_araneus
ENSTNIG00000004408	-	100	78.082	ENSSPUG00000018309	EIF4A1	73	78.082	Sphenodon_punctatus
ENSTNIG00000004408	-	100	47.945	ENSSSCG00000035903	-	75	47.945	Sus_scrofa
ENSTNIG00000004408	-	100	77.740	ENSSSCG00000017957	EIF4A1	75	77.740	Sus_scrofa
ENSTNIG00000004408	-	100	82.192	ENSTRUG00000002188	EIF4A1	63	82.192	Takifugu_rubripes
ENSTNIG00000004408	-	100	77.740	ENSTTRG00000010208	EIF4A1	72	77.740	Tursiops_truncatus
ENSTNIG00000004408	-	100	77.740	ENSUAMG00000003583	EIF4A1	72	77.740	Ursus_americanus
ENSTNIG00000004408	-	100	72.039	ENSUMAG00000016558	-	95	72.039	Ursus_maritimus
ENSTNIG00000004408	-	77	77.679	ENSVPAG00000000142	-	72	77.679	Vicugna_pacos
ENSTNIG00000004408	-	71	71.845	ENSVVUG00000018822	-	62	71.845	Vulpes_vulpes
ENSTNIG00000004408	-	100	77.397	ENSXETG00000020123	eif4a1	72	77.397	Xenopus_tropicalis