EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000004571 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 6480 bases
Position: chrUn_random:70664015-70670494
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000007220	La	PF05383.17	5.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007378	-	2301	-	ENSTNIP00000007220	766 (aa)	-	H3CG43

Gene Model

Click here to download ENSTNIG00000004571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000004571	-	68	39.852	ENSTNIG00000014571	larp4ab	71	39.065
ENSTNIG00000004571	-	65	41.006	ENSTNIG00000015109	larp4aa	66	42.471
ENSTNIG00000004571	-	99	96.104	ENSTNIG00000007991	LARP4B	99	96.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004571	-	98	57.458	ENSG00000107929	LARP4B	100	56.809	Homo_sapiens
ENSTNIG00000004571	-	77	76.768	ENSAPOG00000020531	LARP4B	100	68.586	Acanthochromis_polyacanthus
ENSTNIG00000004571	-	90	57.649	ENSAMEG00000001810	LARP4B	100	55.325	Ailuropoda_melanoleuca
ENSTNIG00000004571	-	92	68.663	ENSAOCG00000007887	-	99	73.214	Amphiprion_ocellaris
ENSTNIG00000004571	-	91	70.081	ENSAPEG00000002512	LARP4B	96	68.782	Amphiprion_percula
ENSTNIG00000004571	-	98	69.863	ENSATEG00000012614	LARP4B	100	69.279	Anabas_testudineus
ENSTNIG00000004571	-	100	57.196	ENSAPLG00000003813	LARP4B	99	56.964	Anas_platyrhynchos
ENSTNIG00000004571	-	98	55.330	ENSACAG00000002858	LARP4B	100	54.545	Anolis_carolinensis
ENSTNIG00000004571	-	98	57.235	ENSANAG00000007531	-	100	56.420	Aotus_nancymaae
ENSTNIG00000004571	-	98	71.073	ENSACLG00000026356	LARP4B	100	71.073	Astatotilapia_calliptera
ENSTNIG00000004571	-	93	51.007	ENSAMXG00000003335	larp4b	92	51.437	Astyanax_mexicanus
ENSTNIG00000004571	-	99	55.556	ENSBTAG00000013899	LARP4B	100	55.311	Bos_taurus
ENSTNIG00000004571	-	98	57.458	ENSCJAG00000018434	LARP4B	100	56.809	Callithrix_jacchus
ENSTNIG00000004571	-	91	57.997	ENSCAFG00020004209	LARP4B	100	56.016	Canis_lupus_dingo
ENSTNIG00000004571	-	96	56.091	ENSCHIG00000013543	LARP4B	98	55.823	Capra_hircus
ENSTNIG00000004571	-	79	62.175	ENSTSYG00000002568	LARP4B	99	61.290	Carlito_syrichta
ENSTNIG00000004571	-	96	50.268	ENSCAPG00000009725	LARP4B	86	64.237	Cavia_aperea
ENSTNIG00000004571	-	98	56.186	ENSCPOG00000009375	LARP4B	100	55.841	Cavia_porcellus
ENSTNIG00000004571	-	98	56.848	ENSCCAG00000024869	LARP4B	100	56.550	Cebus_capucinus
ENSTNIG00000004571	-	98	57.752	ENSCATG00000019750	LARP4B	100	57.198	Cercocebus_atys
ENSTNIG00000004571	-	98	56.516	ENSCLAG00000011570	LARP4B	100	56.088	Chinchilla_lanigera
ENSTNIG00000004571	-	61	88.889	ENSCHOG00000007831	-	61	88.889	Choloepus_hoffmanni
ENSTNIG00000004571	-	98	56.833	ENSCPBG00000017063	LARP4B	100	56.338	Chrysemys_picta_bellii
ENSTNIG00000004571	-	98	56.072	ENSCANG00000038021	LARP4B	100	55.512	Colobus_angolensis_palliatus
ENSTNIG00000004571	-	98	56.088	ENSCGRG00001022930	Larp4b	100	55.440	Cricetulus_griseus_chok1gshd
ENSTNIG00000004571	-	98	56.088	ENSCGRG00000006022	Larp4b	100	55.440	Cricetulus_griseus_crigri
ENSTNIG00000004571	-	98	68.366	ENSCSEG00000007342	LARP4B	100	68.105	Cynoglossus_semilaevis
ENSTNIG00000004571	-	98	69.202	ENSCVAG00000008910	LARP4B	100	69.388	Cyprinodon_variegatus
ENSTNIG00000004571	-	91	51.144	ENSDARG00000062146	larp4b	95	50.067	Danio_rerio
ENSTNIG00000004571	-	93	54.993	ENSDNOG00000045543	-	99	62.130	Dasypus_novemcinctus
ENSTNIG00000004571	-	98	54.475	ENSDORG00000009328	Larp4b	100	54.215	Dipodomys_ordii
ENSTNIG00000004571	-	84	56.196	ENSETEG00000011249	LARP4B	90	56.268	Echinops_telfairi
ENSTNIG00000004571	-	90	57.584	ENSEASG00005019068	-	100	55.757	Equus_asinus_asinus
ENSTNIG00000004571	-	90	57.444	ENSECAG00000024040	LARP4B	100	55.627	Equus_caballus
ENSTNIG00000004571	-	91	57.103	ENSEEUG00000008391	LARP4B	99	54.698	Erinaceus_europaeus
ENSTNIG00000004571	-	98	62.331	ENSELUG00000008626	LARP4B	100	61.700	Esox_lucius
ENSTNIG00000004571	-	86	41.133	ENSELUG00000001417	-	94	41.133	Esox_lucius
ENSTNIG00000004571	-	90	58.333	ENSFCAG00000000721	-	100	55.325	Felis_catus
ENSTNIG00000004571	-	98	57.106	ENSFALG00000006961	LARP4B	100	57.051	Ficedula_albicollis
ENSTNIG00000004571	-	100	57.125	ENSFDAG00000006158	LARP4B	98	56.960	Fukomys_damarensis
ENSTNIG00000004571	-	98	65.285	ENSFHEG00000013037	LARP4B	100	64.844	Fundulus_heteroclitus
ENSTNIG00000004571	-	81	59.813	ENSGMOG00000010818	-	99	60.063	Gadus_morhua
ENSTNIG00000004571	-	98	56.433	ENSGALG00000006672	LARP4B	100	56.322	Gallus_gallus
ENSTNIG00000004571	-	100	68.796	ENSGACG00000017535	LARP4B	99	69.410	Gasterosteus_aculeatus
ENSTNIG00000004571	-	89	56.863	ENSGAGG00000008598	LARP4B	100	56.320	Gopherus_agassizii
ENSTNIG00000004571	-	98	57.328	ENSGGOG00000003572	LARP4B	100	56.420	Gorilla_gorilla
ENSTNIG00000004571	-	98	70.229	ENSHBUG00000007535	LARP4B	100	70.408	Haplochromis_burtoni
ENSTNIG00000004571	-	98	57.345	ENSHGLG00000012936	LARP4B	100	57.309	Heterocephalus_glaber_female
ENSTNIG00000004571	-	85	50.226	ENSHGLG00100017261	-	100	49.396	Heterocephalus_glaber_male
ENSTNIG00000004571	-	98	57.364	ENSHGLG00100016220	-	100	57.328	Heterocephalus_glaber_male
ENSTNIG00000004571	-	80	71.246	ENSHCOG00000011581	LARP4B	67	67.140	Hippocampus_comes
ENSTNIG00000004571	-	93	50.479	ENSIPUG00000009705	larp4b	97	49.864	Ictalurus_punctatus
ENSTNIG00000004571	-	98	55.584	ENSSTOG00000000587	LARP4B	100	55.253	Ictidomys_tridecemlineatus
ENSTNIG00000004571	-	98	55.799	ENSJJAG00000020847	Larp4b	100	55.498	Jaculus_jaculus
ENSTNIG00000004571	-	98	69.936	ENSKMAG00000021674	LARP4B	100	69.554	Kryptolebias_marmoratus
ENSTNIG00000004571	-	79	74.643	ENSLBEG00000025293	-	83	74.643	Labrus_bergylta
ENSTNIG00000004571	-	79	60.841	ENSLACG00000009492	LARP4B	86	60.680	Latimeria_chalumnae
ENSTNIG00000004571	-	100	60.419	ENSLOCG00000012290	larp4b	100	60.914	Lepisosteus_oculatus
ENSTNIG00000004571	-	98	56.026	ENSLAFG00000015334	LARP4B	100	55.856	Loxodonta_africana
ENSTNIG00000004571	-	99	57.580	ENSMFAG00000001766	LARP4B	100	55.512	Macaca_fascicularis
ENSTNIG00000004571	-	98	57.752	ENSMMUG00000005279	LARP4B	100	57.198	Macaca_mulatta
ENSTNIG00000004571	-	99	57.452	ENSMNEG00000014019	LARP4B	100	55.383	Macaca_nemestrina
ENSTNIG00000004571	-	98	57.752	ENSMLEG00000035198	LARP4B	100	57.198	Mandrillus_leucophaeus
ENSTNIG00000004571	-	98	69.365	ENSMAMG00000013742	LARP4B	100	68.991	Mastacembelus_armatus
ENSTNIG00000004571	-	89	70.451	ENSMZEG00005014594	-	100	70.782	Maylandia_zebra
ENSTNIG00000004571	-	98	67.323	ENSMZEG00005006498	-	95	73.223	Maylandia_zebra
ENSTNIG00000004571	-	98	56.410	ENSMGAG00000005472	LARP4B	100	56.026	Meleagris_gallopavo
ENSTNIG00000004571	-	98	55.757	ENSMAUG00000021657	Larp4b	100	55.239	Mesocricetus_auratus
ENSTNIG00000004571	-	98	56.136	ENSMICG00000001301	LARP4B	100	55.570	Microcebus_murinus
ENSTNIG00000004571	-	86	61.646	ENSMOCG00000021452	Larp4b	84	61.444	Microtus_ochrogaster
ENSTNIG00000004571	-	80	74.601	ENSMMOG00000011253	-	89	74.879	Mola_mola
ENSTNIG00000004571	-	98	53.468	ENSMODG00000005957	LARP4B	100	53.934	Monodelphis_domestica
ENSTNIG00000004571	-	98	59.790	ENSMALG00000012432	LARP4B	100	60.710	Monopterus_albus
ENSTNIG00000004571	-	98	56.387	MGP_CAROLIEiJ_G0018216	Larp4b	100	55.123	Mus_caroli
ENSTNIG00000004571	-	98	56.812	ENSMUSG00000033499	Larp4b	100	55.556	Mus_musculus
ENSTNIG00000004571	-	98	56.662	MGP_PahariEiJ_G0019266	Larp4b	100	56.016	Mus_pahari
ENSTNIG00000004571	-	98	56.684	MGP_SPRETEiJ_G0019074	Larp4b	100	55.426	Mus_spretus
ENSTNIG00000004571	-	92	58.678	ENSMPUG00000016220	LARP4B	98	56.577	Mustela_putorius_furo
ENSTNIG00000004571	-	84	57.447	ENSMLUG00000005880	LARP4B	99	55.772	Myotis_lucifugus
ENSTNIG00000004571	-	98	57.235	ENSNGAG00000001750	Larp4b	100	56.977	Nannospalax_galili
ENSTNIG00000004571	-	98	61.155	ENSNBRG00000020018	LARP4B	100	60.761	Neolamprologus_brichardi
ENSTNIG00000004571	-	98	56.848	ENSNLEG00000013442	LARP4B	100	56.680	Nomascus_leucogenys
ENSTNIG00000004571	-	82	43.446	ENSMEUG00000013114	-	83	43.173	Notamacropus_eugenii
ENSTNIG00000004571	-	98	54.417	ENSOPRG00000003300	LARP4B	100	54.370	Ochotona_princeps
ENSTNIG00000004571	-	98	53.299	ENSODEG00000001109	LARP4B	100	59.569	Octodon_degus
ENSTNIG00000004571	-	98	71.594	ENSONIG00000017705	LARP4B	100	71.851	Oreochromis_niloticus
ENSTNIG00000004571	-	98	54.488	ENSOANG00000006100	LARP4B	100	53.603	Ornithorhynchus_anatinus
ENSTNIG00000004571	-	100	54.771	ENSOCUG00000004950	LARP4B	98	54.353	Oryctolagus_cuniculus
ENSTNIG00000004571	-	98	67.794	ENSORLG00000006080	LARP4B	100	67.419	Oryzias_latipes
ENSTNIG00000004571	-	98	67.561	ENSORLG00020020940	LARP4B	100	67.178	Oryzias_latipes_hni
ENSTNIG00000004571	-	98	67.734	ENSORLG00015020608	LARP4B	100	67.350	Oryzias_latipes_hsok
ENSTNIG00000004571	-	98	66.964	ENSOMEG00000019619	LARP4B	100	66.624	Oryzias_melastigma
ENSTNIG00000004571	-	92	55.463	ENSOGAG00000011540	LARP4B	99	55.216	Otolemur_garnettii
ENSTNIG00000004571	-	99	55.371	ENSOARG00000015320	LARP4B	99	55.115	Ovis_aries
ENSTNIG00000004571	-	98	57.588	ENSPPAG00000039232	LARP4B	100	56.939	Pan_paniscus
ENSTNIG00000004571	-	90	58.499	ENSPPRG00000009489	LARP4B	100	56.104	Panthera_pardus
ENSTNIG00000004571	-	90	58.499	ENSPTIG00000008543	LARP4B	100	56.104	Panthera_tigris_altaica
ENSTNIG00000004571	-	98	57.588	ENSPTRG00000002235	LARP4B	100	56.939	Pan_troglodytes
ENSTNIG00000004571	-	99	57.580	ENSPANG00000023546	LARP4B	100	55.512	Papio_anubis
ENSTNIG00000004571	-	98	56.417	ENSPKIG00000012368	LARP4B	99	55.654	Paramormyrops_kingsleyae
ENSTNIG00000004571	-	72	68.051	ENSPSIG00000005600	LARP4B	99	67.412	Pelodiscus_sinensis
ENSTNIG00000004571	-	90	60.515	ENSPMGG00000008261	LARP4B	87	60.372	Periophthalmus_magnuspinnatus
ENSTNIG00000004571	-	98	56.088	ENSPEMG00000014052	Larp4b	100	55.440	Peromyscus_maniculatus_bairdii
ENSTNIG00000004571	-	98	69.231	ENSPFOG00000000029	LARP4B	100	69.355	Poecilia_formosa
ENSTNIG00000004571	-	98	70.481	ENSPLAG00000002871	LARP4B	100	70.481	Poecilia_latipinna
ENSTNIG00000004571	-	98	69.241	ENSPMEG00000016361	LARP4B	100	69.367	Poecilia_mexicana
ENSTNIG00000004571	-	99	57.125	ENSPPYG00000002035	LARP4B	98	56.544	Pongo_abelii
ENSTNIG00000004571	-	98	56.845	ENSPCOG00000014688	LARP4B	100	56.283	Propithecus_coquereli
ENSTNIG00000004571	-	79	55.520	ENSPVAG00000009784	LARP4B	83	54.487	Pteropus_vampyrus
ENSTNIG00000004571	-	98	70.483	ENSPNYG00000024252	LARP4B	100	70.663	Pundamilia_nyererei
ENSTNIG00000004571	-	93	50.611	ENSPNAG00000028956	larp4b	97	50.000	Pygocentrus_nattereri
ENSTNIG00000004571	-	98	56.662	ENSRNOG00000015888	Larp4b	100	55.397	Rattus_norvegicus
ENSTNIG00000004571	-	98	57.494	ENSRBIG00000033294	LARP4B	100	57.069	Rhinopithecus_bieti
ENSTNIG00000004571	-	98	57.623	ENSRROG00000033879	LARP4B	100	57.198	Rhinopithecus_roxellana
ENSTNIG00000004571	-	98	52.652	ENSSBOG00000021109	LARP4B	100	52.078	Saimiri_boliviensis_boliviensis
ENSTNIG00000004571	-	98	55.195	ENSSHAG00000013392	LARP4B	100	54.429	Sarcophilus_harrisii
ENSTNIG00000004571	-	94	57.388	ENSSFOG00015003256	LARP4B	91	56.298	Scleropages_formosus
ENSTNIG00000004571	-	83	89.286	ENSSMAG00000005982	-	99	89.286	Scophthalmus_maximus
ENSTNIG00000004571	-	98	72.010	ENSSDUG00000006704	LARP4B	100	72.010	Seriola_dumerili
ENSTNIG00000004571	-	87	89.286	ENSSLDG00000020660	LARP4B	99	89.286	Seriola_lalandi_dorsalis
ENSTNIG00000004571	-	64	80.734	ENSSARG00000001243	-	79	83.019	Sorex_araneus
ENSTNIG00000004571	-	98	57.068	ENSSPUG00000002102	-	100	56.356	Sphenodon_punctatus
ENSTNIG00000004571	-	79	61.866	ENSSPUG00000013734	-	91	60.884	Sphenodon_punctatus
ENSTNIG00000004571	-	80	77.134	ENSSPAG00000014628	LARP4B	64	87.770	Stegastes_partitus
ENSTNIG00000004571	-	98	56.347	ENSSSCG00000011162	LARP4B	100	56.104	Sus_scrofa
ENSTNIG00000004571	-	98	57.253	ENSTGUG00000000811	-	100	57.014	Taeniopygia_guttata
ENSTNIG00000004571	-	75	61.176	ENSTTRG00000011151	LARP4B	84	61.176	Tursiops_truncatus
ENSTNIG00000004571	-	84	59.187	ENSUAMG00000016461	LARP4B	95	59.002	Ursus_americanus
ENSTNIG00000004571	-	91	58.403	ENSUMAG00000016127	LARP4B	100	56.364	Ursus_maritimus
ENSTNIG00000004571	-	91	58.520	ENSVVUG00000008641	LARP4B	100	56.494	Vulpes_vulpes
ENSTNIG00000004571	-	98	57.584	ENSXETG00000016882	larp4b	100	57.455	Xenopus_tropicalis
ENSTNIG00000004571	-	98	64.524	ENSXCOG00000019952	LARP4B	100	64.119	Xiphophorus_couchianus
ENSTNIG00000004571	-	98	69.451	ENSXMAG00000021533	LARP4B	100	68.869	Xiphophorus_maculatus