EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000004673 (Gene tree)
Gene ID: -
Gene Symbol: rbm25a
Alias: si:ch211-12d10.5
Full Name: RNA binding motif protein 25a
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1746 bases
Position: chr10:11993355-11995100
Accession: ZDB-GENE-090312-142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000007326	PWI	PF01480.17	2.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007484	-	1104	-	ENSTNIP00000007326	367 (aa)	-	H3CGE8

Gene Model

Click here to download ENSTNIG00000004673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000004673	rbm25a	99	77.112	ENSTNIG00000012222	rbm25b	58	77.297

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004673	rbm25a	99	71.117	ENSAPEG00000009666	rbm25b	50	71.173	Amphiprion_percula
ENSTNIG00000004673	rbm25a	99	81.122	ENSATEG00000020676	rbm25a	63	80.381	Anabas_testudineus
ENSTNIG00000004673	rbm25a	99	34.121	WBGene00012245	W04D2.6	70	32.461	Caenorhabditis_elegans
ENSTNIG00000004673	rbm25a	99	70.845	ENSCJAG00000046744	-	99	71.935	Callithrix_jacchus
ENSTNIG00000004673	rbm25a	100	72.752	ENSCHIG00000021190	-	100	73.842	Capra_hircus
ENSTNIG00000004673	rbm25a	99	81.572	ENSCVAG00000005498	rbm25a	99	81.572	Cyprinodon_variegatus
ENSTNIG00000004673	rbm25a	99	67.030	ENSDARG00000039266	rbm25a	99	97.468	Danio_rerio
ENSTNIG00000004673	rbm25a	71	65.152	ENSEBUG00000002963	rbm25b	55	38.329	Eptatretus_burgeri
ENSTNIG00000004673	rbm25a	89	70.948	ENSEASG00005004743	-	100	72.171	Equus_asinus_asinus
ENSTNIG00000004673	rbm25a	89	70.948	ENSECAG00000013395	RBM25	100	72.171	Equus_caballus
ENSTNIG00000004673	rbm25a	99	73.713	ENSFHEG00000005318	rbm25a	51	69.300	Fundulus_heteroclitus
ENSTNIG00000004673	rbm25a	100	74.659	ENSGALG00000009332	-	100	75.204	Gallus_gallus
ENSTNIG00000004673	rbm25a	92	90.000	ENSHCOG00000018433	rbm25a	76	81.731	Hippocampus_comes
ENSTNIG00000004673	rbm25a	99	79.508	ENSKMAG00000016242	rbm25a	51	68.834	Kryptolebias_marmoratus
ENSTNIG00000004673	rbm25a	99	73.151	ENSMMUG00000002332	RBM25	98	74.247	Macaca_mulatta
ENSTNIG00000004673	rbm25a	95	71.839	ENSMAUG00000017751	-	91	72.599	Mesocricetus_auratus
ENSTNIG00000004673	rbm25a	99	69.720	ENSMMOG00000015545	rbm25b	53	70.738	Mola_mola
ENSTNIG00000004673	rbm25a	100	79.795	ENSMALG00000020459	rbm25a	90	79.795	Monopterus_albus
ENSTNIG00000004673	rbm25a	66	80.328	ENSMALG00000020441	rbm25b	75	70.127	Monopterus_albus
ENSTNIG00000004673	rbm25a	99	73.003	MGP_SPRETEiJ_G0018766	-	64	74.247	Mus_spretus
ENSTNIG00000004673	rbm25a	99	80.000	ENSNBRG00000003761	rbm25a	50	80.000	Neolamprologus_brichardi
ENSTNIG00000004673	rbm25a	99	81.471	ENSORLG00000009958	rbm25a	99	81.471	Oryzias_latipes
ENSTNIG00000004673	rbm25a	100	73.924	ENSOMEG00000023172	rbm25b	50	74.177	Oryzias_melastigma
ENSTNIG00000004673	rbm25a	99	71.429	ENSPMGG00000001791	rbm25a	88	69.755	Periophthalmus_magnuspinnatus
ENSTNIG00000004673	rbm25a	89	70.948	ENSPEMG00000008001	-	100	72.171	Peromyscus_maniculatus_bairdii
ENSTNIG00000004673	rbm25a	99	71.461	ENSPFOG00000017931	rbm25a	51	71.461	Poecilia_formosa
ENSTNIG00000004673	rbm25a	89	72.866	ENSPLAG00000000100	rbm25b	100	73.476	Poecilia_latipinna
ENSTNIG00000004673	rbm25a	99	82.385	ENSPLAG00000018338	rbm25a	51	71.689	Poecilia_latipinna
ENSTNIG00000004673	rbm25a	99	70.500	ENSPMEG00000012262	rbm25b	100	73.476	Poecilia_mexicana
ENSTNIG00000004673	rbm25a	99	82.385	ENSPMEG00000024470	rbm25a	53	71.461	Poecilia_mexicana
ENSTNIG00000004673	rbm25a	99	82.834	ENSPREG00000009228	rbm25a	51	71.889	Poecilia_reticulata
ENSTNIG00000004673	rbm25a	99	73.151	ENSRROG00000035556	RBM25	97	73.842	Rhinopithecus_roxellana
ENSTNIG00000004673	rbm25a	99	70.738	ENSSLDG00000024573	rbm25b	85	71.247	Seriola_lalandi_dorsalis
ENSTNIG00000004673	rbm25a	99	73.973	ENSSPUG00000000999	-	99	74.795	Sphenodon_punctatus
ENSTNIG00000004673	rbm25a	99	85.934	ENSTRUG00000003076	rbm25a	51	85.934	Takifugu_rubripes
ENSTNIG00000004673	rbm25a	90	71.386	ENSUAMG00000007707	RBM25	100	72.171	Ursus_americanus
ENSTNIG00000004673	rbm25a	99	76.075	ENSXMAG00000009077	RBM25	50	71.963	Xiphophorus_maculatus