EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000004716 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4156 bases
Position: chrUn_random:9601630-9605785
Accession: ZDB-GENE-040426-968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000007369	ResIII	PF04851.15	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007527	-	2202	-	ENSTNIP00000007369	733 (aa)	-	H3CGJ1

Gene Model

Click here to download ENSTNIG00000004716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004716's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000004716	rad54l	68	30.924	ENSTNIG00000004902	chd1l	55	30.600
ENSTNIG00000004716	rad54l	63	49.640	ENSTNIG00000000029	rad54b	93	42.199
ENSTNIG00000004716	rad54l	78	45.932	ENSTNIG00000018370	rad54b	63	45.840
ENSTNIG00000004716	rad54l	63	34.902	ENSTNIG00000015679	-	50	32.153

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004716	rad54l	99	76.273	ENSG00000085999	RAD54L	99	81.176	Homo_sapiens
ENSTNIG00000004716	rad54l	99	80.027	ENSAPOG00000011643	rad54l	100	79.838	Acanthochromis_polyacanthus
ENSTNIG00000004716	rad54l	99	75.368	ENSAMEG00000013902	RAD54L	99	74.799	Ailuropoda_melanoleuca
ENSTNIG00000004716	rad54l	100	80.514	ENSACIG00000001939	rad54l	99	80.514	Amphilophus_citrinellus
ENSTNIG00000004716	rad54l	99	82.703	ENSAOCG00000017576	rad54l	99	82.679	Amphiprion_ocellaris
ENSTNIG00000004716	rad54l	97	83.826	ENSAPEG00000020658	rad54l	98	83.826	Amphiprion_percula
ENSTNIG00000004716	rad54l	95	85.714	ENSATEG00000006767	rad54l	99	86.147	Anabas_testudineus
ENSTNIG00000004716	rad54l	94	79.913	ENSAPLG00000006389	RAD54L	99	79.913	Anas_platyrhynchos
ENSTNIG00000004716	rad54l	99	77.419	ENSACAG00000002312	RAD54L	99	77.016	Anolis_carolinensis
ENSTNIG00000004716	rad54l	99	76.439	ENSANAG00000035439	RAD54L	99	75.839	Aotus_nancymaae
ENSTNIG00000004716	rad54l	99	79.946	ENSACLG00000018711	rad54l	99	79.946	Astatotilapia_calliptera
ENSTNIG00000004716	rad54l	99	79.839	ENSAMXG00000012777	rad54l	99	79.757	Astyanax_mexicanus
ENSTNIG00000004716	rad54l	99	75.871	ENSBTAG00000019901	RAD54L	99	75.603	Bos_taurus
ENSTNIG00000004716	rad54l	99	55.168	WBGene00004298	rad-54	83	56.977	Caenorhabditis_elegans
ENSTNIG00000004716	rad54l	97	76.741	ENSCJAG00000021080	RAD54L	91	76.741	Callithrix_jacchus
ENSTNIG00000004716	rad54l	99	75.469	ENSCAFG00000004272	RAD54L	99	74.899	Canis_familiaris
ENSTNIG00000004716	rad54l	99	75.502	ENSCAFG00020015066	RAD54L	99	74.933	Canis_lupus_dingo
ENSTNIG00000004716	rad54l	99	75.904	ENSCHIG00000020118	RAD54L	99	75.636	Capra_hircus
ENSTNIG00000004716	rad54l	99	75.100	ENSTSYG00000002032	RAD54L	99	74.665	Carlito_syrichta
ENSTNIG00000004716	rad54l	99	76.408	ENSCPOG00000006768	RAD54L	99	75.839	Cavia_porcellus
ENSTNIG00000004716	rad54l	99	76.676	ENSCCAG00000025783	RAD54L	99	76.107	Cebus_capucinus
ENSTNIG00000004716	rad54l	99	76.408	ENSCATG00000030589	RAD54L	99	75.973	Cercocebus_atys
ENSTNIG00000004716	rad54l	99	76.676	ENSCLAG00000004645	RAD54L	99	76.242	Chinchilla_lanigera
ENSTNIG00000004716	rad54l	99	76.273	ENSCSAG00000001229	RAD54L	99	75.839	Chlorocebus_sabaeus
ENSTNIG00000004716	rad54l	99	75.600	ENSCPBG00000005675	RAD54L	99	75.806	Chrysemys_picta_bellii
ENSTNIG00000004716	rad54l	99	60.390	ENSCING00000024456	-	99	60.471	Ciona_intestinalis
ENSTNIG00000004716	rad54l	99	60.236	ENSCSAVG00000010859	-	99	60.105	Ciona_savignyi
ENSTNIG00000004716	rad54l	99	76.273	ENSCANG00000034891	RAD54L	99	75.839	Colobus_angolensis_palliatus
ENSTNIG00000004716	rad54l	99	75.370	ENSCGRG00001014807	Rad54l	99	74.765	Cricetulus_griseus_chok1gshd
ENSTNIG00000004716	rad54l	99	75.370	ENSCGRG00000016038	Rad54l	99	74.765	Cricetulus_griseus_crigri
ENSTNIG00000004716	rad54l	99	80.323	ENSCSEG00000001983	rad54l	99	80.764	Cynoglossus_semilaevis
ENSTNIG00000004716	rad54l	78	87.200	ENSCVAG00000019561	rad54l	99	87.200	Cyprinodon_variegatus
ENSTNIG00000004716	rad54l	99	78.890	ENSDARG00000018623	rad54l	99	78.302	Danio_rerio
ENSTNIG00000004716	rad54l	99	75.201	ENSDNOG00000003395	RAD54L	99	74.765	Dasypus_novemcinctus
ENSTNIG00000004716	rad54l	99	70.040	ENSDORG00000002632	Rad54l	99	69.426	Dipodomys_ordii
ENSTNIG00000004716	rad54l	91	57.755	FBgn0002989	okr	86	57.926	Drosophila_melanogaster
ENSTNIG00000004716	rad54l	77	73.362	ENSETEG00000000550	RAD54L	77	73.770	Echinops_telfairi
ENSTNIG00000004716	rad54l	99	75.436	ENSEASG00005004511	RAD54L	98	77.875	Equus_asinus_asinus
ENSTNIG00000004716	rad54l	99	75.510	ENSECAG00000008760	RAD54L	99	75.302	Equus_caballus
ENSTNIG00000004716	rad54l	99	72.464	ENSEEUG00000008113	RAD54L	90	78.994	Erinaceus_europaeus
ENSTNIG00000004716	rad54l	99	79.570	ENSELUG00000002295	rad54l	99	79.195	Esox_lucius
ENSTNIG00000004716	rad54l	99	75.067	ENSFCAG00000003444	RAD54L	99	74.228	Felis_catus
ENSTNIG00000004716	rad54l	99	76.985	ENSFALG00000009480	RAD54L	99	76.716	Ficedula_albicollis
ENSTNIG00000004716	rad54l	99	75.570	ENSFDAG00000007806	RAD54L	99	75.570	Fukomys_damarensis
ENSTNIG00000004716	rad54l	64	77.590	ENSFHEG00000009824	rad54l	81	77.331	Fundulus_heteroclitus
ENSTNIG00000004716	rad54l	99	79.184	ENSGMOG00000014568	rad54l	100	78.912	Gadus_morhua
ENSTNIG00000004716	rad54l	99	77.973	ENSGALG00000010356	RAD54L	92	77.838	Gallus_gallus
ENSTNIG00000004716	rad54l	91	79.080	ENSGAFG00000011110	rad54l	99	78.900	Gambusia_affinis
ENSTNIG00000004716	rad54l	99	82.726	ENSGACG00000003111	rad54l	97	82.321	Gasterosteus_aculeatus
ENSTNIG00000004716	rad54l	99	75.705	ENSGAGG00000014089	RAD54L	96	75.436	Gopherus_agassizii
ENSTNIG00000004716	rad54l	99	76.408	ENSGGOG00000010602	RAD54L	99	75.973	Gorilla_gorilla
ENSTNIG00000004716	rad54l	99	80.217	ENSHBUG00000007793	rad54l	99	80.217	Haplochromis_burtoni
ENSTNIG00000004716	rad54l	99	76.408	ENSHGLG00000000753	RAD54L	99	75.839	Heterocephalus_glaber_female
ENSTNIG00000004716	rad54l	99	76.273	ENSHGLG00100016987	RAD54L	99	75.839	Heterocephalus_glaber_male
ENSTNIG00000004716	rad54l	99	78.658	ENSIPUG00000015999	rad54l	99	82.540	Ictalurus_punctatus
ENSTNIG00000004716	rad54l	99	75.335	ENSSTOG00000029125	RAD54L	99	74.631	Ictidomys_tridecemlineatus
ENSTNIG00000004716	rad54l	99	63.087	ENSJJAG00000000235	-	99	63.087	Jaculus_jaculus
ENSTNIG00000004716	rad54l	99	80.811	ENSKMAG00000009944	rad54l	99	80.217	Kryptolebias_marmoratus
ENSTNIG00000004716	rad54l	99	82.745	ENSLBEG00000014617	rad54l	97	86.458	Labrus_bergylta
ENSTNIG00000004716	rad54l	99	79.217	ENSLOCG00000004144	rad54l	99	79.613	Lepisosteus_oculatus
ENSTNIG00000004716	rad54l	99	75.469	ENSLAFG00000007583	RAD54L	100	75.871	Loxodonta_africana
ENSTNIG00000004716	rad54l	99	76.273	ENSMFAG00000031241	RAD54L	99	75.839	Macaca_fascicularis
ENSTNIG00000004716	rad54l	99	76.273	ENSMMUG00000011568	RAD54L	99	75.839	Macaca_mulatta
ENSTNIG00000004716	rad54l	99	76.542	ENSMNEG00000038562	RAD54L	99	76.107	Macaca_nemestrina
ENSTNIG00000004716	rad54l	99	76.408	ENSMLEG00000038145	RAD54L	99	75.973	Mandrillus_leucophaeus
ENSTNIG00000004716	rad54l	99	81.140	ENSMAMG00000022180	rad54l	99	85.229	Mastacembelus_armatus
ENSTNIG00000004716	rad54l	99	79.810	ENSMZEG00005018081	rad54l	99	79.810	Maylandia_zebra
ENSTNIG00000004716	rad54l	99	77.598	ENSMGAG00000010634	RAD54L	99	77.598	Meleagris_gallopavo
ENSTNIG00000004716	rad54l	99	75.335	ENSMAUG00000020076	Rad54l	99	75.302	Mesocricetus_auratus
ENSTNIG00000004716	rad54l	99	76.005	ENSMICG00000003266	RAD54L	99	75.570	Microcebus_murinus
ENSTNIG00000004716	rad54l	99	75.774	ENSMOCG00000001778	Rad54l	99	75.168	Microtus_ochrogaster
ENSTNIG00000004716	rad54l	100	78.146	ENSMALG00000021148	rad54l	100	79.032	Monopterus_albus
ENSTNIG00000004716	rad54l	99	71.578	MGP_CAROLIEiJ_G0026325	Rad54l	99	71.149	Mus_caroli
ENSTNIG00000004716	rad54l	99	75.737	ENSMUSG00000028702	Rad54l	99	75.302	Mus_musculus
ENSTNIG00000004716	rad54l	99	75.335	MGP_PahariEiJ_G0028657	Rad54l	99	75.436	Mus_pahari
ENSTNIG00000004716	rad54l	99	75.737	MGP_SPRETEiJ_G0027297	Rad54l	99	75.302	Mus_spretus
ENSTNIG00000004716	rad54l	99	75.668	ENSMPUG00000012883	RAD54L	99	75.100	Mustela_putorius_furo
ENSTNIG00000004716	rad54l	99	75.201	ENSMLUG00000003763	RAD54L	99	75.201	Myotis_lucifugus
ENSTNIG00000004716	rad54l	99	75.672	ENSNGAG00000024213	Rad54l	99	75.672	Nannospalax_galili
ENSTNIG00000004716	rad54l	99	76.408	ENSNLEG00000016548	RAD54L	99	75.973	Nomascus_leucogenys
ENSTNIG00000004716	rad54l	92	77.596	ENSMEUG00000006793	RAD54L	100	77.596	Notamacropus_eugenii
ENSTNIG00000004716	rad54l	90	79.791	ENSOPRG00000016016	RAD54L	90	79.791	Ochotona_princeps
ENSTNIG00000004716	rad54l	99	76.005	ENSODEG00000008519	RAD54L	99	75.436	Octodon_degus
ENSTNIG00000004716	rad54l	100	79.357	ENSONIG00000007659	rad54l	100	79.357	Oreochromis_niloticus
ENSTNIG00000004716	rad54l	99	76.242	ENSOCUG00000005229	RAD54L	99	76.242	Oryctolagus_cuniculus
ENSTNIG00000004716	rad54l	99	81.793	ENSORLG00000002958	rad54l	99	82.186	Oryzias_latipes
ENSTNIG00000004716	rad54l	99	82.456	ENSORLG00020006554	rad54l	99	86.854	Oryzias_latipes_hni
ENSTNIG00000004716	rad54l	99	81.818	ENSORLG00015002907	rad54l	99	82.321	Oryzias_latipes_hsok
ENSTNIG00000004716	rad54l	99	81.682	ENSOMEG00000007770	rad54l	99	82.079	Oryzias_melastigma
ENSTNIG00000004716	rad54l	99	75.904	ENSOARG00000002264	RAD54L	99	75.636	Ovis_aries
ENSTNIG00000004716	rad54l	99	76.408	ENSPPAG00000031222	RAD54L	99	75.973	Pan_paniscus
ENSTNIG00000004716	rad54l	99	75.067	ENSPPRG00000010317	RAD54L	99	74.228	Panthera_pardus
ENSTNIG00000004716	rad54l	99	75.067	ENSPTIG00000012200	RAD54L	99	74.228	Panthera_tigris_altaica
ENSTNIG00000004716	rad54l	99	76.542	ENSPTRG00000000689	RAD54L	99	76.107	Pan_troglodytes
ENSTNIG00000004716	rad54l	99	76.408	ENSPANG00000016295	RAD54L	99	75.973	Papio_anubis
ENSTNIG00000004716	rad54l	99	74.763	ENSPKIG00000016172	rad54l	99	75.341	Paramormyrops_kingsleyae
ENSTNIG00000004716	rad54l	94	80.347	ENSPSIG00000003258	RAD54L	97	78.371	Pelodiscus_sinensis
ENSTNIG00000004716	rad54l	99	76.550	ENSPMGG00000016335	rad54l	99	76.550	Periophthalmus_magnuspinnatus
ENSTNIG00000004716	rad54l	99	75.774	ENSPEMG00000011422	Rad54l	99	75.034	Peromyscus_maniculatus_bairdii
ENSTNIG00000004716	rad54l	99	68.784	ENSPMAG00000007719	rad54l	99	68.243	Petromyzon_marinus
ENSTNIG00000004716	rad54l	99	77.151	ENSPCIG00000029032	RAD54L	99	77.151	Phascolarctos_cinereus
ENSTNIG00000004716	rad54l	86	82.019	ENSPFOG00000013732	rad54l	99	82.456	Poecilia_formosa
ENSTNIG00000004716	rad54l	83	80.682	ENSPLAG00000023416	rad54l	99	80.682	Poecilia_latipinna
ENSTNIG00000004716	rad54l	91	79.852	ENSPMEG00000008299	rad54l	99	79.643	Poecilia_mexicana
ENSTNIG00000004716	rad54l	99	80.135	ENSPREG00000019955	rad54l	99	79.973	Poecilia_reticulata
ENSTNIG00000004716	rad54l	99	64.926	ENSPPYG00000001398	RAD54L	99	64.477	Pongo_abelii
ENSTNIG00000004716	rad54l	71	79.937	ENSPCAG00000005323	RAD54L	70	79.937	Procavia_capensis
ENSTNIG00000004716	rad54l	99	76.005	ENSPCOG00000015423	RAD54L	99	75.570	Propithecus_coquereli
ENSTNIG00000004716	rad54l	100	76.447	ENSPNYG00000002942	rad54l	99	77.793	Pundamilia_nyererei
ENSTNIG00000004716	rad54l	99	79.459	ENSPNAG00000012483	rad54l	99	79.054	Pygocentrus_nattereri
ENSTNIG00000004716	rad54l	99	74.765	ENSRNOG00000013148	Rad54l	99	74.765	Rattus_norvegicus
ENSTNIG00000004716	rad54l	99	76.107	ENSRBIG00000043495	RAD54L	99	76.107	Rhinopithecus_bieti
ENSTNIG00000004716	rad54l	99	76.408	ENSRROG00000020844	RAD54L	99	75.973	Rhinopithecus_roxellana
ENSTNIG00000004716	rad54l	82	48.765	YGL163C	RAD54	70	48.819	Saccharomyces_cerevisiae
ENSTNIG00000004716	rad54l	99	76.676	ENSSBOG00000024672	RAD54L	99	76.107	Saimiri_boliviensis_boliviensis
ENSTNIG00000004716	rad54l	99	77.078	ENSSHAG00000000110	RAD54L	99	76.376	Sarcophilus_harrisii
ENSTNIG00000004716	rad54l	99	82.003	ENSSDUG00000019147	rad54l	99	82.003	Seriola_dumerili
ENSTNIG00000004716	rad54l	99	82.544	ENSSLDG00000012330	rad54l	99	82.544	Seriola_lalandi_dorsalis
ENSTNIG00000004716	rad54l	75	82.278	ENSSARG00000006689	RAD54L	99	75.402	Sorex_araneus
ENSTNIG00000004716	rad54l	99	82.249	ENSSPAG00000011016	rad54l	99	82.249	Stegastes_partitus
ENSTNIG00000004716	rad54l	99	75.737	ENSSSCG00000003905	RAD54L	99	75.168	Sus_scrofa
ENSTNIG00000004716	rad54l	99	76.242	ENSTGUG00000008233	RAD54L	99	76.312	Taeniopygia_guttata
ENSTNIG00000004716	rad54l	100	86.141	ENSTRUG00000008410	rad54l	100	86.141	Takifugu_rubripes
ENSTNIG00000004716	rad54l	92	76.331	ENSTTRG00000006315	RAD54L	90	76.331	Tursiops_truncatus
ENSTNIG00000004716	rad54l	99	75.472	ENSUAMG00000011824	RAD54L	99	74.899	Ursus_americanus
ENSTNIG00000004716	rad54l	99	74.259	ENSUMAG00000023603	RAD54L	99	73.684	Ursus_maritimus
ENSTNIG00000004716	rad54l	99	75.603	ENSVVUG00000007201	RAD54L	99	75.034	Vulpes_vulpes
ENSTNIG00000004716	rad54l	97	71.508	ENSXETG00000004369	rad54l	99	71.508	Xenopus_tropicalis
ENSTNIG00000004716	rad54l	55	77.723	ENSXCOG00000016028	rad54l	93	71.041	Xiphophorus_couchianus