EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000004725 (Gene tree)
Gene ID: -
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3174 bases
Position: chrUn_random:14339056-14342229
Accession: ZDB-GENE-030131-9687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000007378	RTC	PF01137.21	5.2e-89	1	1
ENSTNIP00000007378	RTC_insert	PF05189.13	2.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007536	-	1217	-	ENSTNIP00000007378	364 (aa)	-	H3CGK0

Gene Model

Click here to download ENSTNIG00000004725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004725's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004725	rtca	100	71.038	ENSG00000137996	RTCA	100	73.469	Homo_sapiens
ENSTNIG00000004725	rtca	100	86.813	ENSAPOG00000001345	rtca	99	86.813	Acanthochromis_polyacanthus
ENSTNIG00000004725	rtca	73	73.606	ENSAMEG00000008855	RTCA	100	73.606	Ailuropoda_melanoleuca
ENSTNIG00000004725	rtca	100	86.813	ENSACIG00000019643	rtca	100	86.813	Amphilophus_citrinellus
ENSTNIG00000004725	rtca	100	87.088	ENSAOCG00000014979	rtca	99	87.088	Amphiprion_ocellaris
ENSTNIG00000004725	rtca	100	87.088	ENSAPEG00000006945	rtca	99	87.088	Amphiprion_percula
ENSTNIG00000004725	rtca	96	89.398	ENSATEG00000006315	rtca	96	89.398	Anabas_testudineus
ENSTNIG00000004725	rtca	96	66.856	ENSAPLG00000015430	RTCA	100	66.856	Anas_platyrhynchos
ENSTNIG00000004725	rtca	100	71.038	ENSANAG00000025446	RTCA	100	71.038	Aotus_nancymaae
ENSTNIG00000004725	rtca	100	85.714	ENSACLG00000020770	rtca	99	85.714	Astatotilapia_calliptera
ENSTNIG00000004725	rtca	100	78.022	ENSAMXG00000043271	rtca	100	78.022	Astyanax_mexicanus
ENSTNIG00000004725	rtca	100	72.131	ENSBTAG00000006321	RTCA	100	72.131	Bos_taurus
ENSTNIG00000004725	rtca	100	71.311	ENSCJAG00000003398	RTCA	100	71.311	Callithrix_jacchus
ENSTNIG00000004725	rtca	100	71.858	ENSCAFG00000020010	RTCA	68	71.858	Canis_familiaris
ENSTNIG00000004725	rtca	100	71.858	ENSCAFG00020011528	RTCA	57	71.858	Canis_lupus_dingo
ENSTNIG00000004725	rtca	100	71.858	ENSCHIG00000018937	RTCA	100	71.858	Capra_hircus
ENSTNIG00000004725	rtca	100	72.404	ENSTSYG00000011305	RTCA	100	72.404	Carlito_syrichta
ENSTNIG00000004725	rtca	100	70.765	ENSCCAG00000021844	RTCA	99	72.072	Cebus_capucinus
ENSTNIG00000004725	rtca	100	69.657	ENSCATG00000019364	RTCA	100	71.521	Cercocebus_atys
ENSTNIG00000004725	rtca	87	72.785	ENSCLAG00000006125	RTCA	100	72.785	Chinchilla_lanigera
ENSTNIG00000004725	rtca	100	71.858	ENSCSAG00000001509	RTCA	100	71.858	Chlorocebus_sabaeus
ENSTNIG00000004725	rtca	99	71.703	ENSCHOG00000005211	RTCA	99	71.703	Choloepus_hoffmanni
ENSTNIG00000004725	rtca	100	66.849	ENSCPBG00000026658	RTCA	100	66.849	Chrysemys_picta_bellii
ENSTNIG00000004725	rtca	99	56.986	ENSCING00000007875	-	99	56.986	Ciona_intestinalis
ENSTNIG00000004725	rtca	99	56.164	ENSCSAVG00000007269	-	99	56.164	Ciona_savignyi
ENSTNIG00000004725	rtca	100	71.585	ENSCANG00000040106	RTCA	100	71.585	Colobus_angolensis_palliatus
ENSTNIG00000004725	rtca	73	72.491	ENSCGRG00001013163	Rtca	85	72.491	Cricetulus_griseus_chok1gshd
ENSTNIG00000004725	rtca	98	81.844	ENSCSEG00000000530	rtca	96	81.844	Cynoglossus_semilaevis
ENSTNIG00000004725	rtca	100	71.585	ENSCVAG00000021809	rtca	100	71.585	Cyprinodon_variegatus
ENSTNIG00000004725	rtca	100	79.121	ENSDARG00000002215	rtca	100	79.121	Danio_rerio
ENSTNIG00000004725	rtca	99	72.802	ENSDNOG00000000456	RTCA	99	72.802	Dasypus_novemcinctus
ENSTNIG00000004725	rtca	100	72.678	ENSDORG00000005448	Rtca	100	72.678	Dipodomys_ordii
ENSTNIG00000004725	rtca	98	40.336	FBgn0025630	Rtca	98	40.336	Drosophila_melanogaster
ENSTNIG00000004725	rtca	94	52.907	ENSEBUG00000008556	rtca	95	52.907	Eptatretus_burgeri
ENSTNIG00000004725	rtca	100	71.858	ENSEASG00005015926	RTCA	100	71.858	Equus_asinus_asinus
ENSTNIG00000004725	rtca	100	71.858	ENSECAG00000019831	RTCA	100	71.858	Equus_caballus
ENSTNIG00000004725	rtca	91	65.896	ENSEEUG00000001165	RTCA	100	65.896	Erinaceus_europaeus
ENSTNIG00000004725	rtca	99	78.729	ENSELUG00000003741	rtca	99	78.729	Esox_lucius
ENSTNIG00000004725	rtca	100	72.404	ENSFCAG00000024460	RTCA	100	72.404	Felis_catus
ENSTNIG00000004725	rtca	98	65.840	ENSFALG00000002443	RTCA	98	65.840	Ficedula_albicollis
ENSTNIG00000004725	rtca	98	56.630	ENSFDAG00000016084	-	100	56.630	Fukomys_damarensis
ENSTNIG00000004725	rtca	100	71.038	ENSFDAG00000012070	-	100	71.038	Fukomys_damarensis
ENSTNIG00000004725	rtca	68	75.203	ENSFHEG00000002868	rtca	97	78.667	Fundulus_heteroclitus
ENSTNIG00000004725	rtca	100	78.846	ENSGMOG00000013264	rtca	100	78.846	Gadus_morhua
ENSTNIG00000004725	rtca	100	68.219	ENSGALG00000005277	RTCA	100	68.219	Gallus_gallus
ENSTNIG00000004725	rtca	100	86.538	ENSGAFG00000011853	rtca	99	86.538	Gambusia_affinis
ENSTNIG00000004725	rtca	100	84.615	ENSGACG00000013497	rtca	100	84.615	Gasterosteus_aculeatus
ENSTNIG00000004725	rtca	80	67.235	ENSGAGG00000023306	RTCA	100	67.235	Gopherus_agassizii
ENSTNIG00000004725	rtca	100	71.038	ENSGGOG00000009546	-	100	71.038	Gorilla_gorilla
ENSTNIG00000004725	rtca	100	70.492	ENSGGOG00000044018	-	100	70.492	Gorilla_gorilla
ENSTNIG00000004725	rtca	100	85.440	ENSHBUG00000002114	rtca	99	85.440	Haplochromis_burtoni
ENSTNIG00000004725	rtca	100	71.585	ENSHGLG00000002617	RTCA	100	71.585	Heterocephalus_glaber_female
ENSTNIG00000004725	rtca	100	71.585	ENSHGLG00100006056	RTCA	100	71.585	Heterocephalus_glaber_male
ENSTNIG00000004725	rtca	100	75.275	ENSHCOG00000020628	rtca	89	75.275	Hippocampus_comes
ENSTNIG00000004725	rtca	100	78.297	ENSIPUG00000024803	rtca	100	78.297	Ictalurus_punctatus
ENSTNIG00000004725	rtca	100	67.213	ENSSTOG00000013528	-	100	67.213	Ictidomys_tridecemlineatus
ENSTNIG00000004725	rtca	100	63.388	ENSSTOG00000033099	-	100	63.388	Ictidomys_tridecemlineatus
ENSTNIG00000004725	rtca	100	52.603	ENSJJAG00000016178	Rtca	100	52.603	Jaculus_jaculus
ENSTNIG00000004725	rtca	100	85.714	ENSKMAG00000006651	rtca	99	85.714	Kryptolebias_marmoratus
ENSTNIG00000004725	rtca	88	87.147	ENSLBEG00000002448	-	99	87.147	Labrus_bergylta
ENSTNIG00000004725	rtca	100	87.637	ENSLBEG00000028971	rtca	100	87.637	Labrus_bergylta
ENSTNIG00000004725	rtca	100	67.671	ENSLACG00000013666	RTCA	100	67.671	Latimeria_chalumnae
ENSTNIG00000004725	rtca	100	76.164	ENSLOCG00000000093	rtca	99	76.164	Lepisosteus_oculatus
ENSTNIG00000004725	rtca	100	71.585	ENSLAFG00000001473	RTCA	100	71.585	Loxodonta_africana
ENSTNIG00000004725	rtca	100	71.858	ENSMFAG00000034132	RTCA	100	71.858	Macaca_fascicularis
ENSTNIG00000004725	rtca	100	71.858	ENSMMUG00000019105	RTCA	100	71.858	Macaca_mulatta
ENSTNIG00000004725	rtca	84	71.197	ENSMNEG00000037163	RTCA	100	71.197	Macaca_nemestrina
ENSTNIG00000004725	rtca	100	59.563	ENSMLEG00000042151	RTCA	100	59.563	Mandrillus_leucophaeus
ENSTNIG00000004725	rtca	100	87.912	ENSMAMG00000016536	rtca	100	87.912	Mastacembelus_armatus
ENSTNIG00000004725	rtca	100	85.714	ENSMZEG00005017945	rtca	99	85.714	Maylandia_zebra
ENSTNIG00000004725	rtca	87	68.239	ENSMGAG00000006892	RTCA	99	68.239	Meleagris_gallopavo
ENSTNIG00000004725	rtca	100	72.678	ENSMAUG00000008488	Rtca	100	72.678	Mesocricetus_auratus
ENSTNIG00000004725	rtca	84	72.168	ENSMICG00000008643	RTCA	100	72.168	Microcebus_murinus
ENSTNIG00000004725	rtca	100	72.131	ENSMOCG00000016660	Rtca	100	72.131	Microtus_ochrogaster
ENSTNIG00000004725	rtca	84	89.902	ENSMMOG00000007750	rtca	100	89.902	Mola_mola
ENSTNIG00000004725	rtca	100	71.311	ENSMODG00000003557	RTCA	100	71.311	Monodelphis_domestica
ENSTNIG00000004725	rtca	100	88.187	ENSMALG00000020844	rtca	100	88.187	Monopterus_albus
ENSTNIG00000004725	rtca	100	71.038	MGP_CAROLIEiJ_G0025565	Rtca	100	72.535	Mus_caroli
ENSTNIG00000004725	rtca	100	70.765	ENSMUSG00000000339	Rtca	100	72.535	Mus_musculus
ENSTNIG00000004725	rtca	100	71.038	MGP_PahariEiJ_G0027011	Rtca	100	72.535	Mus_pahari
ENSTNIG00000004725	rtca	100	70.765	MGP_SPRETEiJ_G0026515	Rtca	100	71.831	Mus_spretus
ENSTNIG00000004725	rtca	100	72.404	ENSMPUG00000012119	RTCA	100	72.404	Mustela_putorius_furo
ENSTNIG00000004725	rtca	100	67.302	ENSMLUG00000009922	RTCA	100	67.302	Myotis_lucifugus
ENSTNIG00000004725	rtca	100	71.311	ENSNGAG00000011540	Rtca	99	71.311	Nannospalax_galili
ENSTNIG00000004725	rtca	100	85.714	ENSNBRG00000003062	rtca	99	85.714	Neolamprologus_brichardi
ENSTNIG00000004725	rtca	100	71.311	ENSNLEG00000031426	RTCA	100	71.311	Nomascus_leucogenys
ENSTNIG00000004725	rtca	73	68.030	ENSOPRG00000012092	RTCA	71	68.030	Ochotona_princeps
ENSTNIG00000004725	rtca	95	72.414	ENSODEG00000006990	RTCA	96	72.650	Octodon_degus
ENSTNIG00000004725	rtca	100	85.989	ENSONIG00000007753	rtca	99	85.989	Oreochromis_niloticus
ENSTNIG00000004725	rtca	87	72.871	ENSOANG00000012055	RTCA	98	72.871	Ornithorhynchus_anatinus
ENSTNIG00000004725	rtca	100	72.404	ENSOCUG00000014247	RTCA	100	72.404	Oryctolagus_cuniculus
ENSTNIG00000004725	rtca	100	86.264	ENSORLG00000013605	rtca	100	86.264	Oryzias_latipes
ENSTNIG00000004725	rtca	100	86.538	ENSORLG00020001904	rtca	100	86.538	Oryzias_latipes_hni
ENSTNIG00000004725	rtca	100	86.813	ENSORLG00015021064	rtca	100	86.813	Oryzias_latipes_hsok
ENSTNIG00000004725	rtca	100	86.264	ENSOMEG00000000756	rtca	100	86.264	Oryzias_melastigma
ENSTNIG00000004725	rtca	100	66.667	ENSOGAG00000005627	RTCA	100	66.667	Otolemur_garnettii
ENSTNIG00000004725	rtca	87	71.698	ENSOARG00000018122	RTCA	100	71.698	Ovis_aries
ENSTNIG00000004725	rtca	100	68.338	ENSPPAG00000035119	RTCA	100	69.903	Pan_paniscus
ENSTNIG00000004725	rtca	100	72.404	ENSPPRG00000000350	RTCA	100	72.404	Panthera_pardus
ENSTNIG00000004725	rtca	100	72.131	ENSPTIG00000012816	RTCA	100	72.131	Panthera_tigris_altaica
ENSTNIG00000004725	rtca	100	68.338	ENSPTRG00000001004	RTCA	100	69.903	Pan_troglodytes
ENSTNIG00000004725	rtca	100	71.858	ENSPANG00000000346	RTCA	100	71.858	Papio_anubis
ENSTNIG00000004725	rtca	100	79.945	ENSPKIG00000001653	rtca	100	79.945	Paramormyrops_kingsleyae
ENSTNIG00000004725	rtca	100	66.301	ENSPSIG00000011408	RTCA	100	66.301	Pelodiscus_sinensis
ENSTNIG00000004725	rtca	100	71.858	ENSPEMG00000018582	Rtca	100	71.858	Peromyscus_maniculatus_bairdii
ENSTNIG00000004725	rtca	99	56.164	ENSPMAG00000009110	rtca	99	56.164	Petromyzon_marinus
ENSTNIG00000004725	rtca	100	71.311	ENSPCIG00000007684	RTCA	100	71.311	Phascolarctos_cinereus
ENSTNIG00000004725	rtca	100	87.397	ENSPFOG00000004824	rtca	100	87.397	Poecilia_formosa
ENSTNIG00000004725	rtca	100	87.363	ENSPLAG00000011753	rtca	99	87.363	Poecilia_latipinna
ENSTNIG00000004725	rtca	100	87.363	ENSPMEG00000020469	rtca	99	87.363	Poecilia_mexicana
ENSTNIG00000004725	rtca	100	86.538	ENSPREG00000001365	rtca	99	86.538	Poecilia_reticulata
ENSTNIG00000004725	rtca	100	71.585	ENSPPYG00000001115	RTCA	100	71.585	Pongo_abelii
ENSTNIG00000004725	rtca	100	69.126	ENSPCAG00000005076	RTCA	100	69.126	Procavia_capensis
ENSTNIG00000004725	rtca	100	72.404	ENSPCOG00000005603	RTCA	100	72.404	Propithecus_coquereli
ENSTNIG00000004725	rtca	100	67.810	ENSPVAG00000009478	RTCA	100	67.810	Pteropus_vampyrus
ENSTNIG00000004725	rtca	100	85.714	ENSPNYG00000004722	rtca	99	85.714	Pundamilia_nyererei
ENSTNIG00000004725	rtca	100	78.846	ENSPNAG00000022270	rtca	100	78.846	Pygocentrus_nattereri
ENSTNIG00000004725	rtca	100	70.765	ENSRNOG00000014575	Rtca	100	70.765	Rattus_norvegicus
ENSTNIG00000004725	rtca	100	68.865	ENSRBIG00000041180	RTCA	100	70.550	Rhinopithecus_bieti
ENSTNIG00000004725	rtca	100	71.311	ENSRROG00000024929	RTCA	100	71.311	Rhinopithecus_roxellana
ENSTNIG00000004725	rtca	100	70.492	ENSSBOG00000028626	RTCA	100	70.492	Saimiri_boliviensis_boliviensis
ENSTNIG00000004725	rtca	100	71.311	ENSSHAG00000001758	RTCA	100	71.311	Sarcophilus_harrisii
ENSTNIG00000004725	rtca	99	85.042	ENSSMAG00000014680	rtca	98	85.042	Scophthalmus_maximus
ENSTNIG00000004725	rtca	98	87.709	ENSSDUG00000015585	rtca	98	87.293	Seriola_dumerili
ENSTNIG00000004725	rtca	96	87.966	ENSSLDG00000018985	rtca	95	87.966	Seriola_lalandi_dorsalis
ENSTNIG00000004725	rtca	87	65.931	ENSSARG00000013993	RTCA	100	65.931	Sorex_araneus
ENSTNIG00000004725	rtca	100	86.538	ENSSPAG00000011938	rtca	99	86.538	Stegastes_partitus
ENSTNIG00000004725	rtca	100	72.404	ENSSSCG00000006865	RTCA	100	72.404	Sus_scrofa
ENSTNIG00000004725	rtca	100	69.041	ENSTGUG00000005154	RTCA	100	69.041	Taeniopygia_guttata
ENSTNIG00000004725	rtca	100	92.308	ENSTRUG00000008799	rtca	100	92.308	Takifugu_rubripes
ENSTNIG00000004725	rtca	58	59.048	ENSTBEG00000000943	RTCA	59	59.048	Tupaia_belangeri
ENSTNIG00000004725	rtca	100	69.393	ENSTTRG00000015327	RTCA	100	69.393	Tursiops_truncatus
ENSTNIG00000004725	rtca	94	71.429	ENSUAMG00000017265	RTCA	96	71.429	Ursus_americanus
ENSTNIG00000004725	rtca	100	71.858	ENSUMAG00000007881	RTCA	100	71.858	Ursus_maritimus
ENSTNIG00000004725	rtca	87	64.353	ENSVPAG00000001039	RTCA	84	64.353	Vicugna_pacos
ENSTNIG00000004725	rtca	100	71.858	ENSVVUG00000022041	RTCA	68	71.858	Vulpes_vulpes
ENSTNIG00000004725	rtca	99	58.356	ENSXETG00000031661	RTCA	99	58.356	Xenopus_tropicalis
ENSTNIG00000004725	rtca	100	75.549	ENSXCOG00000008002	rtca	100	75.549	Xiphophorus_couchianus
ENSTNIG00000004725	rtca	100	86.538	ENSXMAG00000005482	rtca	99	86.538	Xiphophorus_maculatus