EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000004741 (Gene tree)
Gene ID: -
Gene Symbol: rrp36
Alias: cb268|sb:cb268|si:dkey-236e20.6
Full Name: ribosomal RNA processing 36
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2690 bases
Position: chrUn_random:71680279-71682968
Accession: ZDB-GENE-030131-9751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000000546	RRP36	PF06102.12	1e-40	1	1
ENSTNIP00000007395	RRP36	PF06102.12	9.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007553	-	738	-	ENSTNIP00000007395	246 (aa)	-	H3CGL7
ENSTNIT00000000260	-	786	-	ENSTNIP00000000546	262 (aa)	-	H3BX33

Gene Model

Click here to download ENSTNIG00000004741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004741	rrp36	87	49.569	ENSG00000124541	RRP36	96	48.810	Homo_sapiens
ENSTNIG00000004741	rrp36	85	69.340	ENSAPOG00000022015	rrp36	90	63.035	Acanthochromis_polyacanthus
ENSTNIG00000004741	rrp36	86	70.233	ENSACIG00000020578	-	82	61.628	Amphilophus_citrinellus
ENSTNIG00000004741	rrp36	86	73.568	ENSAOCG00000013439	rrp36	69	73.568	Amphiprion_ocellaris
ENSTNIG00000004741	rrp36	86	73.568	ENSAPEG00000020996	rrp36	69	73.568	Amphiprion_percula
ENSTNIG00000004741	rrp36	86	70.925	ENSATEG00000016946	rrp36	77	64.179	Anabas_testudineus
ENSTNIG00000004741	rrp36	91	48.133	ENSANAG00000021773	RRP36	93	48.133	Aotus_nancymaae
ENSTNIG00000004741	rrp36	89	60.000	ENSACLG00000013982	RRP36	90	60.000	Astatotilapia_calliptera
ENSTNIG00000004741	rrp36	87	60.748	ENSACLG00000008408	rrp36	95	61.504	Astatotilapia_calliptera
ENSTNIG00000004741	rrp36	95	46.032	ENSBTAG00000053873	RRP36	98	46.032	Bos_taurus
ENSTNIG00000004741	rrp36	94	45.783	ENSCJAG00000004943	RRP36	96	45.783	Callithrix_jacchus
ENSTNIG00000004741	rrp36	89	48.305	ENSCAFG00020011057	RRP36	96	46.637	Canis_lupus_dingo
ENSTNIG00000004741	rrp36	88	47.210	ENSCHIG00000016354	-	92	47.210	Capra_hircus
ENSTNIG00000004741	rrp36	86	36.073	ENSCHIG00000019781	-	85	38.095	Capra_hircus
ENSTNIG00000004741	rrp36	78	47.959	ENSCHIG00000003210	-	87	49.490	Capra_hircus
ENSTNIG00000004741	rrp36	91	47.737	ENSTSYG00000037176	RRP36	94	47.737	Carlito_syrichta
ENSTNIG00000004741	rrp36	83	47.573	ENSCAPG00000010983	RRP36	89	49.515	Cavia_aperea
ENSTNIG00000004741	rrp36	85	46.890	ENSCPOG00000025932	RRP36	93	48.804	Cavia_porcellus
ENSTNIG00000004741	rrp36	94	47.390	ENSCCAG00000000048	RRP36	95	47.390	Cebus_capucinus
ENSTNIG00000004741	rrp36	87	49.569	ENSCATG00000041903	RRP36	96	48.810	Cercocebus_atys
ENSTNIG00000004741	rrp36	86	47.664	ENSCLAG00000013166	RRP36	96	48.848	Chinchilla_lanigera
ENSTNIG00000004741	rrp36	90	49.372	ENSCSAG00000011553	RRP36	96	48.810	Chlorocebus_sabaeus
ENSTNIG00000004741	rrp36	85	52.093	ENSCPBG00000003555	RRP36	58	53.738	Chrysemys_picta_bellii
ENSTNIG00000004741	rrp36	69	41.573	ENSCING00000012193	-	72	40.000	Ciona_intestinalis
ENSTNIG00000004741	rrp36	76	34.197	ENSCSAVG00000002672	-	96	33.333	Ciona_savignyi
ENSTNIG00000004741	rrp36	84	49.524	ENSCANG00000035127	RRP36	83	50.952	Colobus_angolensis_palliatus
ENSTNIG00000004741	rrp36	85	47.393	ENSCGRG00001021461	Rrp36	95	48.372	Cricetulus_griseus_chok1gshd
ENSTNIG00000004741	rrp36	85	47.393	ENSCGRG00000006286	Rrp36	95	48.372	Cricetulus_griseus_crigri
ENSTNIG00000004741	rrp36	87	66.376	ENSCSEG00000001039	RRP36	70	66.376	Cynoglossus_semilaevis
ENSTNIG00000004741	rrp36	89	60.352	ENSCVAG00000017798	rrp36	96	60.352	Cyprinodon_variegatus
ENSTNIG00000004741	rrp36	88	55.983	ENSDARG00000032516	rrp36	71	56.957	Danio_rerio
ENSTNIG00000004741	rrp36	91	44.493	ENSDORG00000012186	Rrp36	95	45.614	Dipodomys_ordii
ENSTNIG00000004741	rrp36	87	33.929	FBgn0038235	CG8461	93	33.478	Drosophila_melanogaster
ENSTNIG00000004741	rrp36	89	48.739	ENSEASG00005003169	RRP36	92	50.952	Equus_asinus_asinus
ENSTNIG00000004741	rrp36	86	48.837	ENSECAG00000040238	RRP36	92	50.952	Equus_caballus
ENSTNIG00000004741	rrp36	89	38.819	ENSEEUG00000010515	RRP36	95	38.819	Erinaceus_europaeus
ENSTNIG00000004741	rrp36	88	62.844	ENSELUG00000016840	rrp36	69	59.289	Esox_lucius
ENSTNIG00000004741	rrp36	98	46.923	ENSFCAG00000043818	RRP36	98	46.923	Felis_catus
ENSTNIG00000004741	rrp36	85	46.919	ENSFDAG00000010380	RRP36	98	47.867	Fukomys_damarensis
ENSTNIG00000004741	rrp36	64	67.647	ENSFHEG00000000761	rrp36	86	67.647	Fundulus_heteroclitus
ENSTNIG00000004741	rrp36	87	63.014	ENSGAFG00000017817	rrp36	65	62.979	Gambusia_affinis
ENSTNIG00000004741	rrp36	90	64.017	ENSGACG00000019603	RRP36	69	65.639	Gasterosteus_aculeatus
ENSTNIG00000004741	rrp36	91	50.207	ENSGGOG00000037384	RRP36	94	50.207	Gorilla_gorilla
ENSTNIG00000004741	rrp36	87	65.217	ENSHBUG00000008974	RRP36	73	63.598	Haplochromis_burtoni
ENSTNIG00000004741	rrp36	85	48.341	ENSHGLG00000018082	RRP36	83	49.763	Heterocephalus_glaber_female
ENSTNIG00000004741	rrp36	85	48.341	ENSHGLG00100019303	RRP36	83	49.763	Heterocephalus_glaber_male
ENSTNIG00000004741	rrp36	87	47.887	ENSHCOG00000010303	rrp36	85	48.214	Hippocampus_comes
ENSTNIG00000004741	rrp36	85	50.239	ENSIPUG00000016548	rrp36	69	52.632	Ictalurus_punctatus
ENSTNIG00000004741	rrp36	92	44.348	ENSSTOG00000009511	RRP36	97	47.368	Ictidomys_tridecemlineatus
ENSTNIG00000004741	rrp36	87	46.512	ENSJJAG00000023363	Rrp36	96	47.926	Jaculus_jaculus
ENSTNIG00000004741	rrp36	86	69.604	ENSKMAG00000006968	rrp36	66	69.130	Kryptolebias_marmoratus
ENSTNIG00000004741	rrp36	87	62.162	ENSLBEG00000017728	-	70	62.069	Labrus_bergylta
ENSTNIG00000004741	rrp36	85	57.075	ENSLACG00000001888	rrp36	66	60.190	Latimeria_chalumnae
ENSTNIG00000004741	rrp36	88	58.986	ENSLOCG00000015862	RRP36	64	59.649	Lepisosteus_oculatus
ENSTNIG00000004741	rrp36	84	46.977	ENSLAFG00000032704	RRP36	98	47.664	Loxodonta_africana
ENSTNIG00000004741	rrp36	87	49.569	ENSMFAG00000003547	RRP36	96	49.206	Macaca_fascicularis
ENSTNIG00000004741	rrp36	87	49.138	ENSMNEG00000044747	RRP36	96	48.810	Macaca_nemestrina
ENSTNIG00000004741	rrp36	87	49.569	ENSMLEG00000034272	RRP36	96	49.206	Mandrillus_leucophaeus
ENSTNIG00000004741	rrp36	86	70.561	ENSMAMG00000019157	-	62	71.304	Mastacembelus_armatus
ENSTNIG00000004741	rrp36	87	65.652	ENSMZEG00005015204	RRP36	73	64.017	Maylandia_zebra
ENSTNIG00000004741	rrp36	86	46.948	ENSMAUG00000003648	Rrp36	95	47.664	Mesocricetus_auratus
ENSTNIG00000004741	rrp36	86	46.977	ENSMICG00000045230	RRP36	85	48.148	Microcebus_murinus
ENSTNIG00000004741	rrp36	90	46.281	ENSMOCG00000002009	Rrp36	98	46.058	Microtus_ochrogaster
ENSTNIG00000004741	rrp36	87	67.686	ENSMMOG00000018637	-	68	67.982	Mola_mola
ENSTNIG00000004741	rrp36	55	42.857	ENSMODG00000029304	-	68	42.857	Monodelphis_domestica
ENSTNIG00000004741	rrp36	86	72.368	ENSMALG00000008142	-	73	71.245	Monopterus_albus
ENSTNIG00000004741	rrp36	85	45.161	MGP_CAROLIEiJ_G0021680	Rrp36	86	46.226	Mus_caroli
ENSTNIG00000004741	rrp36	98	41.129	ENSMUSG00000023971	Rrp36	95	45.495	Mus_musculus
ENSTNIG00000004741	rrp36	86	45.283	MGP_PahariEiJ_G0020671	Rrp36	92	47.596	Mus_pahari
ENSTNIG00000004741	rrp36	98	41.532	MGP_SPRETEiJ_G0022592	Rrp36	98	41.532	Mus_spretus
ENSTNIG00000004741	rrp36	52	42.963	ENSNGAG00000021177	-	92	42.963	Nannospalax_galili
ENSTNIG00000004741	rrp36	84	49.524	ENSNLEG00000033289	RRP36	98	50.952	Nomascus_leucogenys
ENSTNIG00000004741	rrp36	62	43.791	ENSMEUG00000007149	-	93	45.752	Notamacropus_eugenii
ENSTNIG00000004741	rrp36	67	52.410	ENSOPRG00000002274	RRP36	68	53.614	Ochotona_princeps
ENSTNIG00000004741	rrp36	85	48.858	ENSODEG00000015915	RRP36	94	48.837	Octodon_degus
ENSTNIG00000004741	rrp36	86	66.667	ENSONIG00000015983	rrp36	72	66.667	Oreochromis_niloticus
ENSTNIG00000004741	rrp36	87	64.651	ENSORLG00000029500	rrp36	66	67.841	Oryzias_latipes
ENSTNIG00000004741	rrp36	87	64.186	ENSORLG00020017452	-	67	67.401	Oryzias_latipes_hni
ENSTNIG00000004741	rrp36	87	65.116	ENSORLG00015016898	rrp36	67	67.401	Oryzias_latipes_hsok
ENSTNIG00000004741	rrp36	85	67.857	ENSOMEG00000008623	RRP36	71	65.823	Oryzias_melastigma
ENSTNIG00000004741	rrp36	86	45.581	ENSOGAG00000012699	RRP36	94	46.759	Otolemur_garnettii
ENSTNIG00000004741	rrp36	95	40.586	ENSPPAG00000042831	-	88	41.364	Pan_paniscus
ENSTNIG00000004741	rrp36	97	46.693	ENSPPRG00000014610	RRP36	97	46.693	Panthera_pardus
ENSTNIG00000004741	rrp36	97	46.693	ENSPTIG00000010853	RRP36	97	46.693	Panthera_tigris_altaica
ENSTNIG00000004741	rrp36	89	50.000	ENSPTRG00000018184	RRP36	98	49.042	Pan_troglodytes
ENSTNIG00000004741	rrp36	87	49.569	ENSPANG00000025140	RRP36	96	49.206	Papio_anubis
ENSTNIG00000004741	rrp36	91	58.607	ENSPKIG00000004303	rrp36	72	58.607	Paramormyrops_kingsleyae
ENSTNIG00000004741	rrp36	87	58.605	ENSPMGG00000016870	rrp36	67	60.280	Periophthalmus_magnuspinnatus
ENSTNIG00000004741	rrp36	86	46.226	ENSPEMG00000007015	Rrp36	98	45.333	Peromyscus_maniculatus_bairdii
ENSTNIG00000004741	rrp36	88	47.034	ENSPCIG00000009179	RRP36	90	47.034	Phascolarctos_cinereus
ENSTNIG00000004741	rrp36	87	62.385	ENSPFOG00000011959	rrp36	59	62.821	Poecilia_formosa
ENSTNIG00000004741	rrp36	87	62.385	ENSPLAG00000023901	rrp36	66	61.864	Poecilia_latipinna
ENSTNIG00000004741	rrp36	87	61.927	ENSPMEG00000024099	rrp36	65	62.393	Poecilia_mexicana
ENSTNIG00000004741	rrp36	87	61.468	ENSPREG00000022787	rrp36	66	62.393	Poecilia_reticulata
ENSTNIG00000004741	rrp36	88	48.636	ENSPPYG00000016628	RRP36	96	47.036	Pongo_abelii
ENSTNIG00000004741	rrp36	95	41.270	ENSPCOG00000018401	RRP36	98	41.270	Propithecus_coquereli
ENSTNIG00000004741	rrp36	95	44.398	ENSPVAG00000008714	RRP36	98	44.398	Pteropus_vampyrus
ENSTNIG00000004741	rrp36	87	66.087	ENSPNYG00000018030	RRP36	73	64.435	Pundamilia_nyererei
ENSTNIG00000004741	rrp36	93	53.478	ENSPNAG00000027207	rrp36	65	54.274	Pygocentrus_nattereri
ENSTNIG00000004741	rrp36	85	46.445	ENSRNOG00000017836	Rrp36	88	47.907	Rattus_norvegicus
ENSTNIG00000004741	rrp36	94	49.194	ENSRBIG00000040019	RRP36	95	49.194	Rhinopithecus_bieti
ENSTNIG00000004741	rrp36	94	49.194	ENSRROG00000040721	RRP36	95	49.194	Rhinopithecus_roxellana
ENSTNIG00000004741	rrp36	92	47.325	ENSSBOG00000030228	RRP36	97	47.325	Saimiri_boliviensis_boliviensis
ENSTNIG00000004741	rrp36	84	59.729	ENSSFOG00015023058	rrp36	73	56.574	Scleropages_formosus
ENSTNIG00000004741	rrp36	86	73.128	ENSSMAG00000020911	-	62	73.128	Scophthalmus_maximus
ENSTNIG00000004741	rrp36	86	74.672	ENSSDUG00000018924	rrp36	63	74.672	Seriola_dumerili
ENSTNIG00000004741	rrp36	91	65.351	ENSSLDG00000019741	RRP36	97	73.810	Seriola_lalandi_dorsalis
ENSTNIG00000004741	rrp36	84	48.077	ENSSARG00000000873	RRP36	97	49.519	Sorex_araneus
ENSTNIG00000004741	rrp36	86	52.968	ENSSPUG00000000213	RRP36	60	55.046	Sphenodon_punctatus
ENSTNIG00000004741	rrp36	85	69.302	ENSSPAG00000017154	rrp36	89	59.289	Stegastes_partitus
ENSTNIG00000004741	rrp36	88	37.931	ENSSSCG00000037862	-	97	37.931	Sus_scrofa
ENSTNIG00000004741	rrp36	89	46.835	ENSSSCG00000001656	RRP36	91	46.835	Sus_scrofa
ENSTNIG00000004741	rrp36	88	77.155	ENSTRUG00000021893	rrp36	70	77.155	Takifugu_rubripes
ENSTNIG00000004741	rrp36	84	40.952	ENSTBEG00000012326	RRP36	98	42.857	Tupaia_belangeri
ENSTNIG00000004741	rrp36	84	49.048	ENSTTRG00000007001	RRP36	96	46.186	Tursiops_truncatus
ENSTNIG00000004741	rrp36	98	44.061	ENSUAMG00000015865	RRP36	96	44.061	Ursus_americanus
ENSTNIG00000004741	rrp36	64	51.572	ENSUMAG00000008726	RRP36	98	53.459	Ursus_maritimus
ENSTNIG00000004741	rrp36	84	50.476	ENSVPAG00000008904	RRP36	98	51.905	Vicugna_pacos
ENSTNIG00000004741	rrp36	89	47.881	ENSVVUG00000027816	RRP36	96	46.188	Vulpes_vulpes
ENSTNIG00000004741	rrp36	87	63.362	ENSXCOG00000011238	rrp36	94	59.091	Xiphophorus_couchianus