EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000004821 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA binding motif protein 4.1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2803 bases
Position: chrUn_random:25459503-25462305
Accession: ZDB-GENE-030131-3902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000007482	zf-CCHC	PF00098.23	5.7e-08	1	1
ENSTNIP00000007482	RRM_5	PF13893.6	2.4e-07	1	1
ENSTNIP00000007482	RRM_1	PF00076.22	2.6e-30	1	2
ENSTNIP00000007482	RRM_1	PF00076.22	2.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007641	-	1057	-	ENSTNIP00000007482	326 (aa)	-	H3CGV4

Gene Model

Click here to download ENSTNIG00000004821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000004821	rbm4.1	95	45.576	ENSTNIG00000000316	-	96	47.721
ENSTNIG00000004821	rbm4.1	94	42.378	ENSTNIG00000005668	rbm4.3	100	43.064

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004821	rbm4.1	100	56.190	ENSAPOG00000012353	rbm4.1	79	89.216	Acanthochromis_polyacanthus
ENSTNIG00000004821	rbm4.1	97	92.268	ENSACIG00000016482	rbm4.1	78	89.216	Amphilophus_citrinellus
ENSTNIG00000004821	rbm4.1	100	56.429	ENSAOCG00000010915	rbm4.1	100	89.216	Amphiprion_ocellaris
ENSTNIG00000004821	rbm4.1	100	56.429	ENSAPEG00000009494	rbm4.1	100	89.216	Amphiprion_percula
ENSTNIG00000004821	rbm4.1	97	92.821	ENSATEG00000001904	rbm4.1	82	82.096	Anabas_testudineus
ENSTNIG00000004821	rbm4.1	97	92.268	ENSACLG00000007722	rbm4.1	78	89.216	Astatotilapia_calliptera
ENSTNIG00000004821	rbm4.1	99	43.782	ENSACLG00000007740	-	99	44.330	Astatotilapia_calliptera
ENSTNIG00000004821	rbm4.1	100	64.690	ENSAMXG00000036611	rbm4.1	100	64.690	Astyanax_mexicanus
ENSTNIG00000004821	rbm4.1	100	54.106	ENSCSEG00000014365	rbm4.1	76	84.422	Cynoglossus_semilaevis
ENSTNIG00000004821	rbm4.1	100	91.282	ENSCVAG00000019349	rbm4.1	100	87.019	Cyprinodon_variegatus
ENSTNIG00000004821	rbm4.1	100	48.586	ENSDARG00000055080	rbm4.2	100	49.219	Danio_rerio
ENSTNIG00000004821	rbm4.1	100	76.884	ENSDARG00000036386	rbm4.1	100	76.884	Danio_rerio
ENSTNIG00000004821	rbm4.1	56	57.672	ENSEBUG00000007174	-	97	55.172	Eptatretus_burgeri
ENSTNIG00000004821	rbm4.1	54	58.564	ENSEBUG00000008142	-	50	58.564	Eptatretus_burgeri
ENSTNIG00000004821	rbm4.1	99	77.436	ENSELUG00000013205	rbm4.1	100	77.436	Esox_lucius
ENSTNIG00000004821	rbm4.1	100	54.545	ENSFHEG00000022926	rbm4.1	100	81.579	Fundulus_heteroclitus
ENSTNIG00000004821	rbm4.1	56	70.811	ENSGMOG00000007455	-	93	47.383	Gadus_morhua
ENSTNIG00000004821	rbm4.1	98	85.279	ENSGMOG00000007464	rbm4.1	78	85.279	Gadus_morhua
ENSTNIG00000004821	rbm4.1	100	54.286	ENSGAFG00000019302	rbm4.1	81	82.791	Gambusia_affinis
ENSTNIG00000004821	rbm4.1	95	48.913	ENSGACG00000000821	-	96	49.189	Gasterosteus_aculeatus
ENSTNIG00000004821	rbm4.1	100	87.879	ENSGACG00000000822	rbm4.1	100	87.879	Gasterosteus_aculeatus
ENSTNIG00000004821	rbm4.1	97	92.268	ENSHBUG00000011610	rbm4.1	78	89.216	Haplochromis_burtoni
ENSTNIG00000004821	rbm4.1	90	85.294	ENSHCOG00000011403	rbm4.1	95	85.294	Hippocampus_comes
ENSTNIG00000004821	rbm4.1	98	77.889	ENSIPUG00000022931	rbm4.1	100	77.500	Ictalurus_punctatus
ENSTNIG00000004821	rbm4.1	90	68.333	ENSIPUG00000022937	rbm4.2	100	47.656	Ictalurus_punctatus
ENSTNIG00000004821	rbm4.1	53	73.864	ENSKMAG00000006528	-	92	47.439	Kryptolebias_marmoratus
ENSTNIG00000004821	rbm4.1	100	80.702	ENSKMAG00000006556	rbm4.1	100	80.702	Kryptolebias_marmoratus
ENSTNIG00000004821	rbm4.1	95	48.509	ENSLBEG00000019756	-	90	60.256	Labrus_bergylta
ENSTNIG00000004821	rbm4.1	97	91.753	ENSLBEG00000019782	rbm4.1	78	88.725	Labrus_bergylta
ENSTNIG00000004821	rbm4.1	93	50.546	ENSMAMG00000001760	-	94	49.454	Mastacembelus_armatus
ENSTNIG00000004821	rbm4.1	100	56.532	ENSMAMG00000001765	rbm4.1	82	81.659	Mastacembelus_armatus
ENSTNIG00000004821	rbm4.1	97	92.268	ENSMZEG00005009205	rbm4.1	78	89.216	Maylandia_zebra
ENSTNIG00000004821	rbm4.1	97	93.814	ENSMMOG00000020479	rbm4.1	84	80.000	Mola_mola
ENSTNIG00000004821	rbm4.1	58	68.063	ENSMALG00000020557	-	94	48.209	Monopterus_albus
ENSTNIG00000004821	rbm4.1	100	58.907	ENSMALG00000020544	rbm4.1	100	56.295	Monopterus_albus
ENSTNIG00000004821	rbm4.1	97	92.268	ENSNBRG00000017755	rbm4.1	78	89.216	Neolamprologus_brichardi
ENSTNIG00000004821	rbm4.1	97	91.753	ENSONIG00000015730	rbm4.1	78	88.725	Oreochromis_niloticus
ENSTNIG00000004821	rbm4.1	100	84.651	ENSORLG00000012496	rbm4.1	100	53.589	Oryzias_latipes
ENSTNIG00000004821	rbm4.1	100	84.651	ENSORLG00020012454	rbm4.1	100	53.589	Oryzias_latipes_hni
ENSTNIG00000004821	rbm4.1	100	84.651	ENSORLG00015013678	rbm4.1	100	53.828	Oryzias_latipes_hsok
ENSTNIG00000004821	rbm4.1	100	85.116	ENSOMEG00000001001	rbm4.1	100	53.589	Oryzias_melastigma
ENSTNIG00000004821	rbm4.1	94	81.183	ENSPKIG00000020805	rbm4.1	85	79.710	Paramormyrops_kingsleyae
ENSTNIG00000004821	rbm4.1	54	53.073	ENSPMAG00000003433	rbm4.2	84	53.073	Petromyzon_marinus
ENSTNIG00000004821	rbm4.1	94	46.978	ENSPFOG00000012685	-	95	47.802	Poecilia_formosa
ENSTNIG00000004821	rbm4.1	100	56.341	ENSPFOG00000012675	rbm4.1	81	83.256	Poecilia_formosa
ENSTNIG00000004821	rbm4.1	100	54.524	ENSPLAG00000018572	rbm4.1	81	83.256	Poecilia_latipinna
ENSTNIG00000004821	rbm4.1	100	54.524	ENSPMEG00000006290	rbm4.1	81	83.256	Poecilia_mexicana
ENSTNIG00000004821	rbm4.1	94	50.769	ENSPREG00000003764	-	94	49.096	Poecilia_reticulata
ENSTNIG00000004821	rbm4.1	100	54.524	ENSPREG00000003724	rbm4.1	81	83.256	Poecilia_reticulata
ENSTNIG00000004821	rbm4.1	97	92.268	ENSPNYG00000004662	rbm4.1	78	89.216	Pundamilia_nyererei
ENSTNIG00000004821	rbm4.1	100	48.187	ENSPNAG00000013057	rbm4.2	100	48.320	Pygocentrus_nattereri
ENSTNIG00000004821	rbm4.1	94	81.183	ENSPNAG00000002539	rbm4.1	78	77.612	Pygocentrus_nattereri
ENSTNIG00000004821	rbm4.1	94	80.645	ENSSFOG00015021996	sf1	77	75.743	Scleropages_formosus
ENSTNIG00000004821	rbm4.1	100	79.476	ENSSMAG00000007571	rbm4.1	82	79.476	Scophthalmus_maximus
ENSTNIG00000004821	rbm4.1	97	92.268	ENSSDUG00000003925	rbm4.1	82	82.096	Seriola_dumerili
ENSTNIG00000004821	rbm4.1	94	48.541	ENSSDUG00000003936	-	97	48.421	Seriola_dumerili
ENSTNIG00000004821	rbm4.1	97	92.268	ENSSLDG00000013147	rbm4.1	82	82.096	Seriola_lalandi_dorsalis
ENSTNIG00000004821	rbm4.1	58	68.063	ENSSLDG00000013157	-	94	49.864	Seriola_lalandi_dorsalis
ENSTNIG00000004821	rbm4.1	97	92.268	ENSSPAG00000019053	rbm4.1	78	89.216	Stegastes_partitus
ENSTNIG00000004821	rbm4.1	93	46.216	ENSSPAG00000019046	-	95	46.216	Stegastes_partitus
ENSTNIG00000004821	rbm4.1	100	61.538	ENSTRUG00000013334	rbm4.1	80	92.417	Takifugu_rubripes
ENSTNIG00000004821	rbm4.1	95	47.453	ENSTRUG00000013328	-	96	47.453	Takifugu_rubripes
ENSTNIG00000004821	rbm4.1	75	53.101	ENSXETG00000026649	rbm4b	99	49.128	Xenopus_tropicalis
ENSTNIG00000004821	rbm4.1	100	55.370	ENSXCOG00000003731	rbm4.1	81	83.256	Xiphophorus_couchianus
ENSTNIG00000004821	rbm4.1	94	51.682	ENSXMAG00000008059	-	94	52.439	Xiphophorus_maculatus
ENSTNIG00000004821	rbm4.1	100	55.370	ENSXMAG00000008069	rbm4.1	81	83.256	Xiphophorus_maculatus