EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000004857 (Gene tree)
Gene ID: -
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b%2C subunit 3
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 9524 bases
Position: chrUn_random:72284746-72294269
Accession: ZDB-GENE-040426-2901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000007517	CPSF_A	PF03178.15	7.1e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000007677	-	3264	-	ENSTNIP00000007517	1088 (aa)	-	H3CGY9

Gene Model

Click here to download ENSTNIG00000004857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000004857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000004857	sf3b3	100	93.107	ENSG00000189091	SF3B3	100	96.491	Homo_sapiens
ENSTNIG00000004857	sf3b3	100	97.243	ENSAPOG00000006172	sf3b3	91	97.243	Acanthochromis_polyacanthus
ENSTNIG00000004857	sf3b3	100	92.942	ENSAMEG00000002187	SF3B3	89	92.942	Ailuropoda_melanoleuca
ENSTNIG00000004857	sf3b3	89	97.303	ENSACIG00000016487	sf3b3	89	97.303	Amphilophus_citrinellus
ENSTNIG00000004857	sf3b3	100	97.243	ENSAOCG00000007158	sf3b3	89	97.243	Amphiprion_ocellaris
ENSTNIG00000004857	sf3b3	100	97.243	ENSAPEG00000022786	sf3b3	89	97.243	Amphiprion_percula
ENSTNIG00000004857	sf3b3	100	97.702	ENSATEG00000013708	sf3b3	89	97.702	Anabas_testudineus
ENSTNIG00000004857	sf3b3	90	93.293	ENSAPLG00000004996	SF3B3	99	93.293	Anas_platyrhynchos
ENSTNIG00000004857	sf3b3	100	93.015	ENSACAG00000001817	SF3B3	89	93.015	Anolis_carolinensis
ENSTNIG00000004857	sf3b3	100	93.107	ENSANAG00000028001	SF3B3	89	93.107	Aotus_nancymaae
ENSTNIG00000004857	sf3b3	100	97.794	ENSACLG00000022555	sf3b3	91	97.794	Astatotilapia_calliptera
ENSTNIG00000004857	sf3b3	100	96.691	ENSAMXG00000003410	sf3b3	89	96.691	Astyanax_mexicanus
ENSTNIG00000004857	sf3b3	100	93.107	ENSBTAG00000010627	SF3B3	89	93.107	Bos_taurus
ENSTNIG00000004857	sf3b3	100	59.565	WBGene00019323	teg-4	89	59.565	Caenorhabditis_elegans
ENSTNIG00000004857	sf3b3	100	93.107	ENSCJAG00000014773	SF3B3	89	93.107	Callithrix_jacchus
ENSTNIG00000004857	sf3b3	100	93.199	ENSCAFG00000020151	SF3B3	89	93.199	Canis_familiaris
ENSTNIG00000004857	sf3b3	100	93.199	ENSCAFG00020020912	SF3B3	89	93.199	Canis_lupus_dingo
ENSTNIG00000004857	sf3b3	100	93.199	ENSCHIG00000019822	SF3B3	89	93.199	Capra_hircus
ENSTNIG00000004857	sf3b3	100	93.107	ENSTSYG00000007910	SF3B3	89	93.107	Carlito_syrichta
ENSTNIG00000004857	sf3b3	82	76.364	ENSCAPG00000001484	SF3B3	79	76.364	Cavia_aperea
ENSTNIG00000004857	sf3b3	100	91.728	ENSCPOG00000000586	SF3B3	89	91.728	Cavia_porcellus
ENSTNIG00000004857	sf3b3	100	93.107	ENSCCAG00000017736	SF3B3	89	93.107	Cebus_capucinus
ENSTNIG00000004857	sf3b3	100	93.107	ENSCATG00000036562	SF3B3	89	93.107	Cercocebus_atys
ENSTNIG00000004857	sf3b3	100	93.107	ENSCLAG00000003921	SF3B3	89	93.107	Chinchilla_lanigera
ENSTNIG00000004857	sf3b3	100	93.107	ENSCSAG00000004371	SF3B3	89	93.107	Chlorocebus_sabaeus
ENSTNIG00000004857	sf3b3	89	89.097	ENSCHOG00000001878	SF3B3	79	89.097	Choloepus_hoffmanni
ENSTNIG00000004857	sf3b3	100	92.831	ENSCPBG00000015853	SF3B3	89	92.831	Chrysemys_picta_bellii
ENSTNIG00000004857	sf3b3	100	79.063	ENSCING00000001342	-	89	79.063	Ciona_intestinalis
ENSTNIG00000004857	sf3b3	100	78.480	ENSCSAVG00000011454	-	98	75.155	Ciona_savignyi
ENSTNIG00000004857	sf3b3	100	93.107	ENSCANG00000042920	SF3B3	91	93.107	Colobus_angolensis_palliatus
ENSTNIG00000004857	sf3b3	100	93.015	ENSCGRG00001015908	Sf3b3	89	93.015	Cricetulus_griseus_chok1gshd
ENSTNIG00000004857	sf3b3	100	93.015	ENSCGRG00000010180	Sf3b3	89	93.015	Cricetulus_griseus_crigri
ENSTNIG00000004857	sf3b3	92	96.008	ENSCSEG00000014192	sf3b3	99	96.008	Cynoglossus_semilaevis
ENSTNIG00000004857	sf3b3	100	97.059	ENSCVAG00000010459	sf3b3	89	97.059	Cyprinodon_variegatus
ENSTNIG00000004857	sf3b3	100	96.324	ENSDARG00000103553	sf3b3	89	96.324	Danio_rerio
ENSTNIG00000004857	sf3b3	83	92.952	ENSDNOG00000043626	SF3B3	88	92.952	Dasypus_novemcinctus
ENSTNIG00000004857	sf3b3	100	93.107	ENSDORG00000014176	Sf3b3	89	93.107	Dipodomys_ordii
ENSTNIG00000004857	sf3b3	100	75.501	FBgn0035162	Sf3b3	89	75.501	Drosophila_melanogaster
ENSTNIG00000004857	sf3b3	82	96.237	ENSETEG00000002729	SF3B3	73	96.237	Echinops_telfairi
ENSTNIG00000004857	sf3b3	100	86.029	ENSEBUG00000006117	sf3b3	89	86.029	Eptatretus_burgeri
ENSTNIG00000004857	sf3b3	100	93.199	ENSEASG00005013376	SF3B3	89	93.199	Equus_asinus_asinus
ENSTNIG00000004857	sf3b3	100	93.199	ENSECAG00000014053	SF3B3	89	93.199	Equus_caballus
ENSTNIG00000004857	sf3b3	92	92.982	ENSEEUG00000015611	SF3B3	82	92.982	Erinaceus_europaeus
ENSTNIG00000004857	sf3b3	100	95.050	ENSELUG00000015417	sf3b3	93	95.050	Esox_lucius
ENSTNIG00000004857	sf3b3	100	93.199	ENSFCAG00000009487	SF3B3	89	93.199	Felis_catus
ENSTNIG00000004857	sf3b3	100	92.831	ENSFALG00000007372	SF3B3	89	92.831	Ficedula_albicollis
ENSTNIG00000004857	sf3b3	100	93.107	ENSFDAG00000002608	SF3B3	89	93.107	Fukomys_damarensis
ENSTNIG00000004857	sf3b3	100	97.702	ENSFHEG00000017824	sf3b3	89	97.702	Fundulus_heteroclitus
ENSTNIG00000004857	sf3b3	100	92.470	ENSGMOG00000008139	sf3b3	89	92.470	Gadus_morhua
ENSTNIG00000004857	sf3b3	100	93.015	ENSGALG00000002531	SF3B3	89	93.015	Gallus_gallus
ENSTNIG00000004857	sf3b3	100	97.335	ENSGAFG00000015206	sf3b3	98	97.459	Gambusia_affinis
ENSTNIG00000004857	sf3b3	100	97.337	ENSGACG00000002646	sf3b3	89	97.337	Gasterosteus_aculeatus
ENSTNIG00000004857	sf3b3	100	92.831	ENSGAGG00000006746	SF3B3	90	92.831	Gopherus_agassizii
ENSTNIG00000004857	sf3b3	100	93.107	ENSGGOG00000003246	SF3B3	89	93.107	Gorilla_gorilla
ENSTNIG00000004857	sf3b3	89	92.739	ENSHBUG00000005960	sf3b3	88	92.739	Haplochromis_burtoni
ENSTNIG00000004857	sf3b3	100	93.107	ENSHGLG00000010135	SF3B3	89	93.107	Heterocephalus_glaber_female
ENSTNIG00000004857	sf3b3	100	90.761	ENSHGLG00100011148	SF3B3	90	90.761	Heterocephalus_glaber_male
ENSTNIG00000004857	sf3b3	100	96.967	ENSHCOG00000011981	sf3b3	89	96.967	Hippocampus_comes
ENSTNIG00000004857	sf3b3	100	96.783	ENSIPUG00000020435	sf3b3	89	96.783	Ictalurus_punctatus
ENSTNIG00000004857	sf3b3	100	93.107	ENSSTOG00000007065	SF3B3	89	93.107	Ictidomys_tridecemlineatus
ENSTNIG00000004857	sf3b3	100	93.107	ENSJJAG00000003948	Sf3b3	89	93.107	Jaculus_jaculus
ENSTNIG00000004857	sf3b3	100	97.059	ENSKMAG00000004066	sf3b3	92	97.059	Kryptolebias_marmoratus
ENSTNIG00000004857	sf3b3	100	97.243	ENSLBEG00000018302	sf3b3	98	97.243	Labrus_bergylta
ENSTNIG00000004857	sf3b3	98	89.302	ENSLACG00000012501	SF3B3	89	89.302	Latimeria_chalumnae
ENSTNIG00000004857	sf3b3	100	96.786	ENSLOCG00000007566	sf3b3	89	96.786	Lepisosteus_oculatus
ENSTNIG00000004857	sf3b3	100	93.199	ENSLAFG00000012219	SF3B3	89	93.199	Loxodonta_africana
ENSTNIG00000004857	sf3b3	100	93.107	ENSMFAG00000045487	SF3B3	89	93.107	Macaca_fascicularis
ENSTNIG00000004857	sf3b3	100	93.107	ENSMMUG00000017812	SF3B3	89	93.107	Macaca_mulatta
ENSTNIG00000004857	sf3b3	100	93.107	ENSMNEG00000033385	SF3B3	89	93.107	Macaca_nemestrina
ENSTNIG00000004857	sf3b3	100	89.154	ENSMLEG00000043891	SF3B3	89	89.154	Mandrillus_leucophaeus
ENSTNIG00000004857	sf3b3	100	97.886	ENSMAMG00000016837	sf3b3	89	97.886	Mastacembelus_armatus
ENSTNIG00000004857	sf3b3	100	97.794	ENSMZEG00005010836	sf3b3	89	97.794	Maylandia_zebra
ENSTNIG00000004857	sf3b3	85	97.189	ENSMZEG00005026015	sf3b3	87	97.189	Maylandia_zebra
ENSTNIG00000004857	sf3b3	100	93.015	ENSMGAG00000001597	SF3B3	89	93.015	Meleagris_gallopavo
ENSTNIG00000004857	sf3b3	80	76.155	ENSMAUG00000013618	Sf3b3	84	76.904	Mesocricetus_auratus
ENSTNIG00000004857	sf3b3	100	91.927	ENSMICG00000001363	SF3B3	89	91.927	Microcebus_murinus
ENSTNIG00000004857	sf3b3	100	93.015	ENSMOCG00000006108	Sf3b3	89	93.015	Microtus_ochrogaster
ENSTNIG00000004857	sf3b3	85	97.405	ENSMMOG00000002598	sf3b3	86	97.405	Mola_mola
ENSTNIG00000004857	sf3b3	100	88.613	ENSMODG00000014363	SF3B3	89	88.613	Monodelphis_domestica
ENSTNIG00000004857	sf3b3	100	97.243	ENSMALG00000008014	sf3b3	89	97.243	Monopterus_albus
ENSTNIG00000004857	sf3b3	100	93.015	MGP_CAROLIEiJ_G0031563	Sf3b3	89	93.015	Mus_caroli
ENSTNIG00000004857	sf3b3	100	93.015	ENSMUSG00000033732	Sf3b3	89	93.015	Mus_musculus
ENSTNIG00000004857	sf3b3	100	92.923	MGP_SPRETEiJ_G0032681	Sf3b3	89	92.923	Mus_spretus
ENSTNIG00000004857	sf3b3	100	93.199	ENSMPUG00000010277	SF3B3	89	93.199	Mustela_putorius_furo
ENSTNIG00000004857	sf3b3	100	93.015	ENSMLUG00000014607	SF3B3	89	93.015	Myotis_lucifugus
ENSTNIG00000004857	sf3b3	100	93.107	ENSNGAG00000021903	Sf3b3	89	93.107	Nannospalax_galili
ENSTNIG00000004857	sf3b3	79	97.222	ENSNBRG00000007197	sf3b3	86	97.222	Neolamprologus_brichardi
ENSTNIG00000004857	sf3b3	100	91.460	ENSNLEG00000016127	SF3B3	89	91.460	Nomascus_leucogenys
ENSTNIG00000004857	sf3b3	92	89.142	ENSMEUG00000004479	SF3B3	83	89.142	Notamacropus_eugenii
ENSTNIG00000004857	sf3b3	98	89.662	ENSOPRG00000009847	SF3B3	89	89.662	Ochotona_princeps
ENSTNIG00000004857	sf3b3	100	93.107	ENSODEG00000014154	SF3B3	89	93.107	Octodon_degus
ENSTNIG00000004857	sf3b3	100	97.886	ENSONIG00000011198	sf3b3	89	97.886	Oreochromis_niloticus
ENSTNIG00000004857	sf3b3	100	93.290	ENSOANG00000001161	-	89	93.290	Ornithorhynchus_anatinus
ENSTNIG00000004857	sf3b3	100	90.809	ENSOCUG00000004139	SF3B3	89	90.809	Oryctolagus_cuniculus
ENSTNIG00000004857	sf3b3	100	97.151	ENSORLG00000013472	sf3b3	89	97.151	Oryzias_latipes
ENSTNIG00000004857	sf3b3	100	97.151	ENSORLG00020017473	sf3b3	89	97.151	Oryzias_latipes_hni
ENSTNIG00000004857	sf3b3	100	97.059	ENSORLG00015007710	sf3b3	89	97.059	Oryzias_latipes_hsok
ENSTNIG00000004857	sf3b3	100	96.875	ENSOMEG00000014483	sf3b3	89	96.875	Oryzias_melastigma
ENSTNIG00000004857	sf3b3	100	92.759	ENSOGAG00000016051	SF3B3	89	92.759	Otolemur_garnettii
ENSTNIG00000004857	sf3b3	100	92.942	ENSOARG00000004816	SF3B3	89	92.942	Ovis_aries
ENSTNIG00000004857	sf3b3	100	93.107	ENSPPAG00000026807	SF3B3	89	93.107	Pan_paniscus
ENSTNIG00000004857	sf3b3	100	93.199	ENSPPRG00000001686	SF3B3	89	93.199	Panthera_pardus
ENSTNIG00000004857	sf3b3	86	92.803	ENSPTIG00000020382	SF3B3	88	92.803	Panthera_tigris_altaica
ENSTNIG00000004857	sf3b3	100	93.107	ENSPTRG00000008308	SF3B3	89	93.107	Pan_troglodytes
ENSTNIG00000004857	sf3b3	100	93.107	ENSPANG00000024075	SF3B3	89	93.107	Papio_anubis
ENSTNIG00000004857	sf3b3	100	96.140	ENSPKIG00000002712	sf3b3	89	96.140	Paramormyrops_kingsleyae
ENSTNIG00000004857	sf3b3	88	93.215	ENSPSIG00000002232	SF3B3	88	93.215	Pelodiscus_sinensis
ENSTNIG00000004857	sf3b3	100	93.015	ENSPEMG00000008603	Sf3b3	89	93.015	Peromyscus_maniculatus_bairdii
ENSTNIG00000004857	sf3b3	100	89.982	ENSPMAG00000001793	sf3b3	89	89.982	Petromyzon_marinus
ENSTNIG00000004857	sf3b3	100	93.290	ENSPCIG00000014927	SF3B3	89	93.290	Phascolarctos_cinereus
ENSTNIG00000004857	sf3b3	100	97.610	ENSPFOG00000015516	sf3b3	89	97.610	Poecilia_formosa
ENSTNIG00000004857	sf3b3	100	97.610	ENSPLAG00000014330	sf3b3	97	97.764	Poecilia_latipinna
ENSTNIG00000004857	sf3b3	100	97.610	ENSPMEG00000019856	sf3b3	89	97.610	Poecilia_mexicana
ENSTNIG00000004857	sf3b3	90	97.459	ENSPREG00000019669	sf3b3	97	97.459	Poecilia_reticulata
ENSTNIG00000004857	sf3b3	95	92.873	ENSPPYG00000007539	SF3B3	89	92.873	Pongo_abelii
ENSTNIG00000004857	sf3b3	97	72.417	ENSPCAG00000002623	SF3B3	87	72.417	Procavia_capensis
ENSTNIG00000004857	sf3b3	83	98.131	ENSPCOG00000026582	SF3B3	87	98.131	Propithecus_coquereli
ENSTNIG00000004857	sf3b3	100	93.199	ENSPVAG00000000684	SF3B3	89	93.199	Pteropus_vampyrus
ENSTNIG00000004857	sf3b3	100	97.886	ENSPNYG00000003528	sf3b3	89	97.886	Pundamilia_nyererei
ENSTNIG00000004857	sf3b3	100	96.507	ENSPNAG00000015419	sf3b3	89	96.507	Pygocentrus_nattereri
ENSTNIG00000004857	sf3b3	100	93.015	ENSRNOG00000017724	Sf3b3	89	93.015	Rattus_norvegicus
ENSTNIG00000004857	sf3b3	100	93.107	ENSRBIG00000021904	SF3B3	89	93.107	Rhinopithecus_bieti
ENSTNIG00000004857	sf3b3	100	93.107	ENSRROG00000045703	SF3B3	89	93.107	Rhinopithecus_roxellana
ENSTNIG00000004857	sf3b3	100	93.107	ENSSBOG00000029156	SF3B3	89	93.107	Saimiri_boliviensis_boliviensis
ENSTNIG00000004857	sf3b3	100	93.290	ENSSHAG00000000372	SF3B3	89	93.290	Sarcophilus_harrisii
ENSTNIG00000004857	sf3b3	100	96.967	ENSSFOG00015012877	sf3b3	89	96.967	Scleropages_formosus
ENSTNIG00000004857	sf3b3	100	96.967	ENSSMAG00000014386	sf3b3	89	96.967	Scophthalmus_maximus
ENSTNIG00000004857	sf3b3	100	98.070	ENSSDUG00000021201	sf3b3	99	94.567	Seriola_dumerili
ENSTNIG00000004857	sf3b3	100	97.978	ENSSLDG00000017532	sf3b3	99	95.325	Seriola_lalandi_dorsalis
ENSTNIG00000004857	sf3b3	100	93.015	ENSSARG00000006917	SF3B3	89	93.015	Sorex_araneus
ENSTNIG00000004857	sf3b3	100	93.015	ENSSPUG00000006253	SF3B3	89	93.015	Sphenodon_punctatus
ENSTNIG00000004857	sf3b3	100	88.879	ENSSPAG00000003125	sf3b3	89	88.879	Stegastes_partitus
ENSTNIG00000004857	sf3b3	100	93.199	ENSSSCG00000025323	SF3B3	97	94.309	Sus_scrofa
ENSTNIG00000004857	sf3b3	100	92.929	ENSTGUG00000006082	SF3B3	89	92.929	Taeniopygia_guttata
ENSTNIG00000004857	sf3b3	54	89.626	ENSTRUG00000015623	sf3b3	88	89.626	Takifugu_rubripes
ENSTNIG00000004857	sf3b3	100	78.217	ENSTBEG00000002946	SF3B3	96	78.217	Tupaia_belangeri
ENSTNIG00000004857	sf3b3	100	92.279	ENSTTRG00000005855	SF3B3	89	92.279	Tursiops_truncatus
ENSTNIG00000004857	sf3b3	100	93.199	ENSUAMG00000006780	SF3B3	89	93.199	Ursus_americanus
ENSTNIG00000004857	sf3b3	100	93.199	ENSUMAG00000017757	SF3B3	93	93.199	Ursus_maritimus
ENSTNIG00000004857	sf3b3	100	76.654	ENSVPAG00000003202	SF3B3	89	76.654	Vicugna_pacos
ENSTNIG00000004857	sf3b3	100	93.199	ENSVVUG00000017922	SF3B3	89	93.199	Vulpes_vulpes
ENSTNIG00000004857	sf3b3	100	93.199	ENSXETG00000032869	SF3B3	89	93.199	Xenopus_tropicalis
ENSTNIG00000004857	sf3b3	87	97.771	ENSXCOG00000013628	sf3b3	97	97.771	Xiphophorus_couchianus
ENSTNIG00000004857	sf3b3	100	97.610	ENSXMAG00000006334	sf3b3	99	97.764	Xiphophorus_maculatus